© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0310500.1
CCTAATAAGTGAGTCTTACCTTGAGTATTCAGGTTACTTGTGCTTTTGGGCACAACCACCACATTATCACCTTAGTACCATATGAAACATAAGGCCTTTTTCCAAAAAAAAGAAAAGAAAGAAAAGAAACACAAGGCTACCATATGAAACACCACGCTGTAAAGGCTACCTATAAAAACGATAGCACATGAACACACGCAGCAACATTCCAGCCTTCCAGGTTCACAAAATCAAAACAGCATACTCTCTCCGTCCAAGAAAGAATTAATCTTGGATAGAATGTGACCTATCCTGAAATGACGAATCTGGATGGGTCACATTGTCCAGATTCGTTGTCTTAGGAATAAGTCACGTTCTATCCTAGGTTGATTCTTTTTAAGAGGGAGGAAGTACAACATCTTGTGCAAAACGCTCCACAACACAGCAATTCCACTACCTATATACCTTAACCAACGCTGCATGCCCCCATCACTCTATGCTTACACCAGCTTCATCATTGCCTTCCCGCGCTGCCCTTCTCATCATTTCGATCTTGACAGAAGGCCCCGCCGTGTCGCCGCCGCCGCCGTTCGACGGCTCGGCGGCGACGCCGGCGCCAGCGCTTCCCTCCTTGAGTCCTTTCCTCATCTTGACCTTCTGTGCCCAGCCCAGCACGCCCTGCTGCACGTGATCGTTGAAGATCTCCTTCTTGTAGAAGCTCCCCATCTGAGTGACAACTGCATACAGAGGCATGGTGCTGTAGCTGCAGAGAAGCTGGATGGTGACCCCGATAACAAGCCTCGGCACGATGAAACTAACTTGCCCCATTATGCAGGAACTGAACCCGTATGTGGTGAGTATCCAGAAGAAGAACGCGATCTCAAACGCGTTCTGGAAGAGAATGAAGTGGATCAGGTAGAGGATAATCCTTGGCCGCCCAAGCCAGAAGTGGTCATCTGATGGTTTTACGACCAAATCACCCTCAATTGCAGAGTTCTTCTCAGCCACATCATGGGCTAACTGAGCTATGACGTGCTCCAGCTTAGTGCCAACAGCTAGTAGAAGAATTAGGGGAAGAAAAGCAATCCAAAAGTACGTGTGCCAACCGTTGACATTCAGCAAGAGGAAGATCACAACAAAAACCCACAAGTACCAGCTTATGCCAACCACTTTCTTAAAGTCAGACTCTAAGACCCTCATCATGTATTTATGGAAATCAAATTTTGGGTTTCCACGACAATGAGTCATGATAAAGCCAAGACGCATTGTTGTATAATCCGATTTAGAAACTGATCCATAAAACTGCTTAACAAAAGAATGCAGCCAACTCAATATTTTAGAGTCTTTGCCCATGCCCTTAAAATGATCATTGATAAATTCAAATTGATGCACGTGGGTCACCTTGGCAGGCCCTGGTTGACCACTTCCCACAGCATCTTTCTGAATTTCAACCTCCCATTGTTTCCATTGGTGTATCTTAGCACCCCCTAGAAGCATAGTTGAAACACTGAAAATAACATGTGTGATAGCCAGAACAAATATGAAAATATGCAATTGATGTATGGCTTCAAGGGACAGCAATGGAACTTTCCCCTTCTTCTGGCAAAGCTCTGCCCCCGCCCCACCTTCACTGAGCAATCGCCTCCCAATTCTGCCAACGATCTGAGCAGCAGCAACGTGCTCCTTTGCGGGGCCCACCGCTTCCCTCTGGCATGGCAGCATGTGGACTGTCCAGCGAGGAGGAATGCAGGTCCTCTGGATCAGGCCCTGGAACACCGTCAGCAGCAGCGAGATGAACCCAAGAAGCATCAACTCTTCCTTGACCTTGAGGAGCGCCTCGTAGAGCGGCTTCTGATTCTTCCTCTTGAGCATCTTGCCGAGGTAATGGAGGCAGCGCTCGGCGACGAGGGAGATGAGCACCATGAGCGAGCACACCGCCGCCACGATCCACGTCGGCGTGAACTCCAGCGTCGCCGCCTCCGCCGCCATCTTCCCTCCCTTCCCGGGCCGGCGGCGGTGGAGGAGCGGAAGGAAACAGCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0310500.1 | 5 | 20486067 | A | G |
| Osa05LNT0310500.1 | 5 | 20486572 | C | T |
| Osa05LNT0310500.1 | 5 | 20486861 | G | A |
| Osa05LNT0310500.1 | 5 | 20487255 | A | G |
| Osa05LNT0310500.1 | 5 | 20487629 | T | G |
| Osa05LNT0310500.1 | 5 | 20489345 | G | C |
| Osa05LNT0310500.1 | 5 | 20489581 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0310500.1 | osa-miR5543 | Cleavage | 4.5 | 21.426 | 1 | 21 |
| Osa05LNT0310500.1 | osa-miR5837.2 | Cleavage | 4.5 | 12.717 | 1 | 21 |
| Osa05LNT0310500.1 | osa-miR5516b | Cleavage | 4.5 | 22.646 | 1 | 21 |
| Osa05LNT0310500.1 | osa-miR6255 | Cleavage | 4.0 | 18.4 | 1 | 22 |
| Osa05LNT0310500.1 | osa-miR1439 | Cleavage | 4.5 | 15.109 | 1 | 21 |
| Osa05LNT0310500.1 | osa-miR5516a | Cleavage | 4.5 | 22.646 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0310500.1 | 5 | nan | Morphological trait | Seed | RG13 | RG573 |
| Osa05LNT0310500.1 | 5 | qNBL-5 | Resistance or Tolerance | Blast resistance | RZ649 | RZ225 |
| Osa05LNT0310500.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0310500.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0310500.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0310500.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)