© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0310600.1
AAAAGAATAACCAATGCAAATAATATTATTGAGAACTGTATCAATCACAGTTGTCCACTGGAACAGCAACCTTTTGACACCCCACAACCTACTCCTTGTACAGACCAGACCTGATTATTGTCCACCACTTGAATCCCAATATCTAAGAACCACCCATCAACTGCATTAACTAATCCAAAACAAAATAATGTTAATATTTAGGAGCCAGGTACACAAAGAATAAACAACAATATGAGCAAGCAACAAGCCCACGAGCAGACATATCACTTTCACATAGATTTCCTTTCTTCCATCCAACAACATATCTGCGGTCAAGCGCACAAAATCAAGGCAAGGCCTAATGCCAGCCGTGCTGTTCCTTCCTTTGTTTGCATCAGCAATCATCTCCAGCAGTAGAACAGGTTTGCAGTATGTTCAGCTCATCATCAGCTCAGGCATCGAATTTCCAGATGTCGCGATCTCCGATCACCGTCCTGTCTTAGCGCGTTTCATCCCAGTTGAGTTGAAGGGGGATACACTGGGACTGGGACTAAGGTGGGGGCTTGGGCTCTCCTCCCTTAGAGTGCCATTCAAAATTGCCAGTTCTCGCAGCTGTTGCTTCTTGTAGTAGTCCATGGATTCATCAACTGGTTTGAGAAGATCCTCCAGGATTGCCACGGCTTGGTTTAGTCGCACATCAACGATATCAGACGGAAACTCAGCTTCCACAAGTACATGCAGTGGATCATTTAAGTGCTCATAGCCAGGCTTATCCCTAAGCTTGTCTTCCTTAACAGAATCTTTCACTGAACCCCGTCCACGAATATAGACTCTACATTGGGTGGTAGCTTCAACTCTTTTCAGGGAGTTTCCTCGTGGTCCCAACAATCGACCAACAAAATTGTAATTGGGATACTTGTCGACAGGAACATCAATCCTGACAACTTTCTTAACAACAGGGCTTCCAGCAACTCCTGGAGCAACATTCCAGCCCATGGAGGGCGATTGGAGTACCCCCATCTGCTCTGTTTGCATTCCTGACCATCCCTCCAGATCCATTGGTTGACCATTCATAGGGTGGCCAGTTAACCTTAATGGGCTACCATGATTGACTCTCTCAGGTTCAACAAAATTTGGGTTAGGTGGCAAAGAAGATGCCCTCAAAATCTCTTGGTTTAAAAGCCTGTTACAAAACGGAAGAACTTGCATGAACGGGGCTAACTTCTGCCTCTCAGCAAGTAACTCAGCAAGATATCTCTCCCTCTCAGAGGCAGGAGACCTCAAGGGGCTCTGATGATGGGGAGAAGAATGAGCACCGGATGGCAAGAACTGGAAGAAGGCCGGTGGTGGGATCCTCTCATCCATGGCATCCAGCAGCAACAAGAACTCAAGAAAATTGCAGTCTTTCGGCGCAAACCAGGATCAAGAAAGATAGAGAGACAGCCCCAGTAGCCAAGAACCCAAGAAATCAAGAAAACCAAGAAGAGCAAAACAACCAGGAAGCTATCAGAGAGGAGATGTATCTATCTATGGGGGGGGGGGGGGTGAGGCCTGAATGGAATCCAAGGAAATCTAAAAAGGACAGAGAGGTGCCAAGAACCAAGAAGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0310600.1 | 5 | 20572735 | C | G |
| Osa05LNT0310600.1 | 5 | 20570555 | T | C |
| Osa05LNT0310600.1 | 5 | 20571231 | C | T |
| Osa05LNT0310600.1 | 5 | 20571801 | T | C |
| Osa05LNT0310600.1 | 5 | 20569330 | C | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0310600.1 | osa-miR5541 | Translation | 4.0 | 6.711 | 1 | 21 |
| Osa05LNT0310600.1 | osa-miR156b-3p | Cleavage | 5.0 | 12.756 | 1 | 21 |
| Osa05LNT0310600.1 | osa-miR156c-3p | Translation | 4.5 | 18.326 | 1 | 22 |
| Osa05LNT0310600.1 | osa-miR156g-3p | Translation | 4.5 | 18.326 | 1 | 22 |
| Osa05LNT0310600.1 | osa-miR156j-3p | Translation | 5.0 | 18.326 | 1 | 22 |
| Osa05LNT0310600.1 | osa-miR160f-5p | Translation | 4.5 | 8.861 | 1 | 21 |
| Osa05LNT0310600.1 | osa-miR171b | Cleavage | 5.0 | 22.349 | 1 | 21 |
| Osa05LNT0310600.1 | osa-miR171c-3p | Cleavage | 5.0 | 22.349 | 1 | 21 |
| Osa05LNT0310600.1 | osa-miR171d-3p | Cleavage | 5.0 | 22.349 | 1 | 21 |
| Osa05LNT0310600.1 | osa-miR171e-3p | Cleavage | 5.0 | 22.349 | 1 | 21 |
| Osa05LNT0310600.1 | osa-miR171f-3p | Cleavage | 5.0 | 22.349 | 1 | 21 |
| Osa05LNT0310600.1 | osa-miR166i-3p | Cleavage | 5.0 | 20.927 | 1 | 21 |
| Osa05LNT0310600.1 | osa-miR408-5p | Cleavage | 4.5 | 16.615 | 1 | 21 |
| Osa05LNT0310600.1 | osa-miR1866-5p | Cleavage | 3.5 | 17.002 | 1 | 24 |
| Osa05LNT0310600.1 | osa-miR1320-5p | Cleavage | 4.0 | 5.615 | 1 | 21 |
| Osa05LNT0310600.1 | osa-miR2876-5p | Translation | 3.5 | 17.541 | 1 | 21 |
| Osa05LNT0310600.1 | osa-miR5076 | Cleavage | 4.5 | 18.747 | 1 | 22 |
| Osa05LNT0310600.1 | osa-miR5150-3p | Cleavage | 3.5 | 14.294 | 1 | 24 |
| Osa05LNT0310600.1 | osa-miR156f-3p | Translation | 5.0 | 18.326 | 1 | 22 |
| Osa05LNT0310600.1 | osa-miR156h-3p | Translation | 5.0 | 18.326 | 1 | 22 |
| Osa05LNT0310600.1 | osa-miR156l-3p | Translation | 5.0 | 18.326 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0310600.1 | 5 | nan | Morphological trait | Seed | RG13 | RG573 |
| Osa05LNT0310600.1 | 5 | qNBL-5 | Resistance or Tolerance | Blast resistance | RZ649 | RZ225 |
| Osa05LNT0310600.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0310600.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0310600.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0310600.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)