© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0311300.1
AAAATAAAACCACATTCCCCTCCCATAAAAAAATAATATGTTCATCTTTACTGTGATAGATCAAAGGCTGATATTCGGAAAACACTAATAACATAATTAAGAACATCTCCCCAAAGTTTAAATATGTAGATATGTACCCAGCTGATTCATGTACATACCTAAAGCACAATTTGTGTGCATCATCAACAGGACGTAGAAGTTGCGAGGAGAGCTCCCTTGTTCTTGTTCTTGTACTTGAACGTGACGGCGAAGTAGCCGTAGGCGAGCAGCTCGAGCGCGCTGAGCGCGGCGATCAGCCAGTAGAAGTAGTCGAGGTGGGCGCGGTTGAGGTTGTTGGAGAACCAGCTGCCGCCCCTCGCCGCCGTCGCCCGGTCGATCCCGGACACGAGCGCGCTGCTGATGAAGCTGCCGACGCCGAAGATGCTGAGGTAGAGCGCCAGCCCGAGGCTGCGCAGCTTGTCGGGCACCTGGTCGTAGAAGAACTCCTGGAGCCCCACCATGGTGAACACGTCCGCCGCGCCGAACAGCACGTACTGCGGCACCATCCACCACAGGCTCATCGGCACCGGGACGCCCGCCTTGTCGACGAGCCCGGCGTCCCGCGCCGCCCGCAGCCGGCGGGTCTCGACGAGCGCCGCGATCACCATGGACACCAGGGACAGCACCATCCCGGCGCCGATCCGCTGCAGCATGGTGATGCCCGAGGGGACGCCCGTGTAGCGGCGCGCCACCGGCACGATGACGCGGTCGTAGACCGGGATGATGGCCACGATGGTGATGCTGATGAAGCTCTGCAGCGCCGCCGGTGGGACCTGTATATGGTCGCCGATCCGCCGGTCCAGCGTCCCCGCCTGCTTCGTGAAGAACGTCGACGACTGCGCTAACGCCACGGCGTAGATCAGGCACGTCGCCCAGATCGGGAACAGCCGGACGATGCCCTTCGCTTGCTCCACGAGGCCCGCCTTGCCCACCACCTGTTCGTCCTCCTCTACTCCCGTGCTGAACTCCGGCGCCGATGTCGCCGTTGGATGGCACTCCTGCGAAGCCGGCGGAAGAAGGGGGATCGACTTCGCCCTGTTTCGCCACGCCGCGAGTGCCTCGCCGGCGCGAGCGACCACGCCCTTCTTGCTGCCGGAGACGTAGTAGCGGTACGTCCTGGTGCCGAGCAGGAACACGGCGAGGGCGCACGCCATGACGACGCAGGGGATGCCGAAGCCGAGGCCCCAGCCGATGTTGTCCTGGACGTAGCTGAGGAACACCAGCGTGACGGCGGTGCCGCCGCACATGCCGAAGTACCACCAGTTGAAGAAGGAGCTCCTGGAGACCGACTCCTCGGGGTCGCTCGGGTCGAACTGGTCGGCGCCGAACGCCTGCACGCACGGCTTGTGGCCGCCCTGCGCGACGGCCACCATGTAGAGGGAGATGTAGAAGAACGCCACCCGCAGAGTCGACGGTGGGCAGGTCTTGCCGCCGGCGACGGCGGCGCTGCTGCATTGGTTGCCGCCGGTGGAGATCAAGGTCGAGAAAGCTAACATGGCCAAGCCCAGGATGTAGAGCAGCGAGGCGAGGAGGATGGTGCGGTAGCGGCCGAGCCAGGAGTCGGCGAGGGCGCCGCCGAGCAGCGGCAGCAGCTGGGAGACGCCGTTCCAGGCGTTGATGGCCGCCGCCGCCGCCGCGTTCCCTTCCCCGAGCGAGCCCGTCAGGTAGGTGATCAGGTTCGCCGACACCCCGTAGAACGCGAACCGCTCCGCGATCTCCACCGCTGCAGATCCCCCAATAATCCATGTCAAATTCACCACCACACAACTCGTACGCATCGATGATTCTCAGTTCTGGCCTGCCAATCGAGCGCACTACTTGCCTATGATGAAGAGCGCCGACCTCCAGCCGCCGGTGGCGCCGCGGAGGGCGGGGCGGCCGCGGTGGTCCACGGGGGCGGCGGCGGCGGCGGCCACATCCCCGTCCGCCATGCCGTCGTCCAGTGCGAGCAGCGGGTCGTAGGAGCCGGAGTCGGAGCCGGAAGGCATCGTCGCCGGCCGGCTTTGACACTATATATATGGGCAGCTCGCTCTCTCTCTCTCACGCACACAACTAGCCGCAGCTCGGCCGAAACTTTCGCAGTCAATGCCTACTCACTCACACCTTGGCTTGGCGGCGGCTAAAATAAGCAAAGCAGCATGAGAATCGGCCGGGAATGGATCTCAACAGAAAATAAGCGCCAACTGGCGCGCTCGATTTATATCCCATTTATATTATTTTTGTGTTATTAATTAGCACATTGTTCATAAAAAATATAGAAATCAATTTAATTTCCTTGAAACTCATAAAAAATCGTAGGAATGGAATTTTTTGAGTTTAAGTTTAACATAACGGGTCATATTGTTGAGAAAATCATCAAATTTTCTCTTTTTTTCAATCCATACTATTAATTCTTCCATTGTTTTTCTAAAATTATAATTAAATTGTTTACTAATGATAAAATTGGTGTTGTTTTTTTTTAAAAAAAAGTGTTTCAGATTTTTGTTTTGTTAGGAGCCACAATGTTCATCATTTGTTTTGATGACATAACAATACTAAATTGGGTTTAAATCATAAACATTGTATAGGTGTTTGTATTGATGGCTAATTAGTGATGGGTGACATATATACGTTGATGATGAGTTGCATGTGGTGATTTCGCTGATTTTAGAAGAAAAAGAAGTTAATTTTAATTCCTGAACTATTTCACCGGAGTAGTTAACATACTAAATTGTTTTTTTCTTATTCAACATTTCTTTTTAATTTTTTTCCCACCGTTTATGCAGGTTGAAAGTACATAGGACTGATTTAAACATCAAAATTTTAAGTTCAAGCAAACAACCACATTTTGAAAAATATTTTTGAACTTTAATAATATTCTAATGTATGACTCCAACAAATTTCAGCTTAAAGTAAGAAAACTACAAAATATTATTAAGGAGTAAAGTGAACCATTTTTTACAGTTTAGGAGGTAAGATGAGCCAAAAAAATTAGATTTTTTAATAGTATTCATCGAATTAGTTCGGAGAAGTAAAATATTTTTTTTTATTTTGAGATATGCTAACTCAATTTTTCAAAGATGCTGATATGTATGAAAACTGAGTAGTTGTATATGCATTCAACATTTTTTTTGTAATACTAATGTACTACCTCAGTACTTATACATATGTAGAGCATGTGAGCTCTATTGACATAGGCATTCGCTGCTTTTGCCTAATCGATCCTTCCAGAATAGCCTTTCATCGGCATAGGAGGACTGGCCTGCCACAACCCTGTACTTCCTTCGTACTCCTAGACGCACAACTGCTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0311300.1 | 5 | 21188994 | C | T |
| Osa05LNT0311300.1 | 5 | 21186425 | A | G |
| Osa05LNT0311300.1 | 5 | 21186496 | C | T |
| Osa05LNT0311300.1 | 5 | 21188473 | C | G |
| Osa05LNT0311300.1 | 5 | 21189365 | C | A |
| Osa05LNT0311300.1 | 5 | 21190543 | A | G |
| Osa05LNT0311300.1 | 5 | 21191700 | T | A |
| Osa05LNT0311300.1 | 5 | 21192105 | A | T |
| Osa05LNT0311300.1 | 5 | 21192321 | A | C |
| Osa05LNT0311300.1 | 5 | 21186366 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0311300.1 | osa-miR5530 | Cleavage | 4.5 | 19.345 | 1 | 21 |
| Osa05LNT0311300.1 | osa-miR5821 | Translation | 4.5 | 16.553 | 1 | 21 |
| Osa05LNT0311300.1 | osa-miR6250 | Cleavage | 5.0 | 18.263 | 1 | 22 |
| Osa05LNT0311300.1 | osa-miR167a-3p | Translation | 5.0 | 19.931 | 1 | 22 |
| Osa05LNT0311300.1 | osa-miR171c-5p | Translation | 4.0 | 11.7 | 1 | 21 |
| Osa05LNT0311300.1 | osa-miR414 | Cleavage | 3.5 | 23.382 | 1 | 21 |
| Osa05LNT0311300.1 | osa-miR810b.2 | Cleavage | 5.0 | 7.693 | 1 | 21 |
| Osa05LNT0311300.1 | osa-miR812g | Cleavage | 4.0 | 18.136 | 1 | 24 |
| Osa05LNT0311300.1 | osa-miR812h | Cleavage | 4.0 | 18.136 | 1 | 24 |
| Osa05LNT0311300.1 | osa-miR812i | Cleavage | 4.0 | 18.136 | 1 | 24 |
| Osa05LNT0311300.1 | osa-miR812j | Cleavage | 4.0 | 18.136 | 1 | 24 |
| Osa05LNT0311300.1 | osa-miR2101-5p | Cleavage | 3.5 | 11.551 | 1 | 22 |
| Osa05LNT0311300.1 | osa-miR2864.2 | Translation | 5.0 | 21.943 | 1 | 21 |
| Osa05LNT0311300.1 | osa-miR2873b | Cleavage | 4.5 | 11.456 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0311300.1 | 5 | nan | Morphological trait | Seed | RG13 | RG573 |
| Osa05LNT0311300.1 | 5 | qNBL-5 | Resistance or Tolerance | Blast resistance | RZ649 | RZ225 |
| Osa05LNT0311300.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0311300.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0311300.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0311300.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Osa05LNT0311300.1 | 5 | nan | Physiological trait | Eating quality | RM305 | RM178 |
| Osa05LNT0311300.1 | 5 | nan | Physiological trait | Eating quality | RM305 | RM178 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)