© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0312300.1
GAGCAAAAGCTTCCATGTTAAGTTTTATTGTTGGGATTTCATCAGTATCTTCATCAAAATCTTCAATATCATTCTCTAAAAGTTCTCGGCATTCTTCCTCTCTTGGACTTGCTGGCTCCTCAATTATTGGATTTGTGTTGTTAGCATGAACATCCCTTGCATGGATACTCCCCTCGAGCTGAAGCAGAGGAGTTGAATGTGGTGTGGGCATTGTACCATTCTGGAAATCAAATTGATTGCTCATATTCACCAACCTTTTGTCCTGAGGAGAAGGAAGTGCAAGTCTTGCACTTGCAAAGGCACTTGCAAAATGCTTGCATTCACTCCTCATTGGACATGCATTGCAATTCGGCTTGCTTTTGGTACAGAACACCTGTGAAAACCATGAAACTCTGTTAATAATTCCTTATAGTTATAAATTATGTTATTTACTCCTTATTGCCTTAATTATTCATGATTCCAAATACTGTAATTTGCCTGGAAAAGAAATAACCTAGAAATTACACAAACTAATAAAAAAAGGGCAACTATGAGTGGGTATGGTTAATTGGTTATAACTCACAGTGTTTGTTGATCAAGTTTACACAGACGAGGCCAGAGGTACTTTTGTATAGTCTCCAAGACAGGGTATAGCTCCAGAAGGTGTAACTGAAGAGATTCAGGGAGGGGTTGAATTGGCACCCATCCCAATCGTACACATATACGACCAACATTAGTATCAACTGGGAATGCAAGATGATGTAATGTCAAAAGGCGGACGCACTCAACACTTTTGAGCCCCAATCCGCGTATACTAAGCAGATAATCCTTTGCTGAGTCTGGGGGAACATCTCTTAACCACTCAAGATCAATGCTCCCATGATCGGTGACCAAACGATTCAGGAATTTCTGTGAATAATCAATTGACGTGAGCAAAAACTATACTAGAGGCCATGAGCCTATGAGATTTCCTAGTGCTACAGAATATATTTCCCTAAGGGTTAAGGAAATAAGGAATATCTGCCAACTCTATAATACAGCCTTAACAGAGAGAGACAAATGTAAGACTTTCAAGAAAAATTTCAAGTGGTCCATGCATGCCTATTAAATCCTAGCATTTTTTCTAAACTAAGGTTAATACTGGCATAAAACTTAATGAGAAAGGAAAAGTTTATTTCCAATAAAATATCAAGTAGTGCAAACCTAGAAAACCATGAGCAGTGTTTAATTGGTAACCTATCAAGAACTAGTACCTGGATACGCTCTGCTAAGACATTATTCATTCCTCGTTCTCGAATGGCATGAGAAATTCTTTGTACATCTGCACACCTTACTGCTTCCCAATCAACAGAATCTCTTCGGTCAAAAATTCTTTCTTTCATCTGATAATTACCACAAGCCTGTCTTCGCAATTTATCCCAGTCAAAATTCTCACTGTTCTTTTTACTTGTGGTTCTTGGTTTCTTTGGTTTTGATGCCTGTGCTGCTGTATCTGGCAATCCATTGAAGGAAGCAAAACCAGATTTTAAGGTTGAATCATCAGCTTTGGTGGCTGTTTCGGGTATCGCTCCACCAGTGGCATATAGTGATTCATGGTCCTGAAACTCTGATGCTTCATAACAACTCCTTTTGCAACAATGTAATAATTTGACTGGAAGCTCTGTGCTTGCCAGTGCCGAGCTAACATTTGTGCCAGCAATCATATTTCCATTCATCTGCGCTAGATGAGCATCAAATGGCATGAAAAAAGAACTGTTCTCCTCAATTGTGCCAATTTTAAAGTTTGATGATGCAGAACCTATAGAACTATTAGGAGAGGTAGAAGAAACATGTATGTCGTTCCTCTCATCTAGTTGATGACAATCAGTAGCTGAGAAAAATGGATACATGTTGGAACCAGAAGGAATCCGAGGTTCATCTACAACATAATTATTTGTTGCTGCTGCTTTGATTCCGTGGTACTCAGTTTCATTGGCTGTGACATCATTTCCTGTTAATGATTTTCCATCATCAAAATTGCTTCCCACCTGCTGAGAAGCTGTGTCACTAATGCCACCAACAAAATTTCTAGGAGCATGATCCATCCCAGAACTCAAAGGTAATCCTGGTTGAAGAATTGACTCTGAAGTTACAACACTTTGGGATAATGATATCTCCGTCTGGAACTGTGTCGCATGTAGATTTTTCATACGTGCTGTTAATTCTACTAAGGAGATATCTGAAATTGATTTTGCTTTATGATCTATTCTTGTCTCGTGGTCACAAAGACTTCCAGCTGGTTCTTTACAATGAAGAGAATAATTTTCGCCTTTAGTTAACTCATTAACAGTAGCATTGCCCTTTGGTTCCATGTGGATCTTCTCACAGGCCATTGAGAGCTCCTCAAAATTTAATCCTATATCTGGTCTTGACCCATCATAAAAGAATTCAAATGTGCCTCTGTCTCTTACTGCACTCGTGCTAATGATTTCTTCATTGTCCTGACCAGCAATGCCATCATTACAATTGCCATCTGACCCTGGAGGAAAACTTGCGGCAAGGGCCATGTATGCAGAGCTGGAAAGATGATCCGCTACATTCTGCGTGAGGAAAACTCCTACTACAGAGTCCACTACTGATCCTTTCCAAGGAGAAAAGCGCCTGTCACCTGATAAACAGGCAAATGCAAGGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0312300.1 | 5 | 21890942 | A | G |
| Osa05LNT0312300.1 | 5 | 21892260 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0312300.1 | osa-miR1440b | Cleavage | 4.5 | 3.628 | 1 | 21 |
| Osa05LNT0312300.1 | osa-miR169r-5p | Cleavage | 4.5 | 22.16 | 1 | 21 |
| Osa05LNT0312300.1 | osa-miR1435 | Translation | 5.0 | 21.488 | 1 | 20 |
| Osa05LNT0312300.1 | osa-miR1441 | Translation | 5.0 | 14.308 | 1 | 21 |
| Osa05LNT0312300.1 | osa-miR1855 | Translation | 5.0 | 23.521 | 1 | 21 |
| Osa05LNT0312300.1 | osa-miR1857-3p | Translation | 5.0 | 14.677 | 1 | 21 |
| Osa05LNT0312300.1 | osa-miR5489 | Cleavage | 4.0 | 13.808 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0312300.1 | 5 | qNBL-5 | Resistance or Tolerance | Blast resistance | RZ649 | RZ225 |
| Osa05LNT0312300.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0312300.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0312300.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0312300.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Osa05LNT0312300.1 | 5 | nan | Physiological trait | Eating quality | RM305 | RM178 |
| Osa05LNT0312300.1 | 5 | nan | Physiological trait | Eating quality | RM305 | RM178 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)