© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0001600.1
GAACTCGATGTAACACATAGTTAATTGAATAAATTTTATTCATATATGAATCACATAAAAATACACCATCTAAGCAATATGAACCTACATACAATCGATCAATGTGAGCGACCAATTGAACCCGCCAGTACCTTAGTCAGAACGTGAGTCGCGATCCCAATTGGGCAGAAGAGCAGGCACAGAGAAACCGAATGCCTGGTCTCTATGTTGTTCTTGATGCCGTCATGGTACACCTGCCTTGCGGCGAAGAGGTCGACGGCTAGGAGGTGGATCCAGGCGGAGGCGACGGTCATCTCGCTGGCGAACATCCTGACGATCCCCGTCAACTCGGGGAGCCAGTACTTGCTGGCGAACATGGCGCGTAGGGTGTCGGGAGTCCAGGATAGGTAGAGCAGGTAGGCGTAGAGGATGCCGAGGGCGACGTACGGCGCGCTGCTATCCACGGCACGCTTGGTGACGTCGGCGTTGGGGGCGACGACCATGAGAGTGTAGAAAGGGAGGACGGCGATGGTGCCCCAGGTGAAGGCGGAGCTGGCAATCTGAGACGACGCCATCCATGCGCGAGGCCGGAACAGAGGCGCCCTGCCGCGGGCGGGGACGGCGGGGCGGGAGACCGCGGCGAGCTCCGGCCGGAGAGGGCGCGCCGCCCACGCCGACGCTGCGCCGGCGCCGCTTCCCGTGCGGAGCTGGCCACCGGGCAGCACCACCGGGCGCTGCTGCCTCAGCGCCAGTGGCGCAGCCACGCCAACCCGAGCGGCGGAGGAGAGGAGGAGGAGAGCCGCCATTGCAGGGCAGGAAGCGAGCAGGAGCAGCGGGGAGGCGGAGGAGGGGAAGAGGCCATTACCAGTGGCTGGCTCACCCTTTGTACTAGTAGGTCCTAGCTGTTGCTGTGGCGCCGCTCCGGCCACCACTCTCACTGGTGTAGGTGTAGTAGCTGTTGTTGCCTTCCCATGGTCGGCCCGGGTGGTGGACGGCGGCCGGGGCCCGCCACGGTCGAGGTTGGCCGTCGACGCGTGGTCGCCACCACCGACCAGTGTCCACGTTATTGATCACCAACAAAGCAAGAAGAGAGATCGTGCTGCTTCGGTCGCGCCCGAGTCAACTGGCCTTGGTACGAAGGAATGAGAGCGTACAGAGACAGGCTGGCCCGCGGCCATGTGCCATGTGCCATGTGCCGCCGCCCTCACTTTGCCGGCGATCTCCTCCTCCTGCCCTCGATCCGTCTCCGTCACCGGCCGCCGCTGCGTCGACACGTCACTCACACGGCTTCCTCACTTTCACCACTTGCAACCACAGAGTAAAACACTTCACACTCCTTTAGGAATGATTGGTACACCCATCCAACATCATAACCAACAAGTATAGGATGATTGGTACACCACAACATAGCAGGATATGATATCATCAACACCAACAAGTACAGATGATTCAGCAATAATATCACACATGGCATGTTGGTAAAAGCAAACAAGATTCAGAAGAAAAAGGAAAAACAAAAGAAGCAAAAATGTTTCTCATCATCTGAGATGCTGCAGATGCAGAAAAACGAGATAGAGCAAAGGTGGTGTTAGTCCTCAGGCCGAACCATTTGGCCCAACCTTTCCTTCTTCTGACCGATCAGTCTAACCCGATTAAAACTTTTTAACTCTCTATCTCTGCAAAGTTGCTTGCATCTCCCCCCAACTACGGGCTTGGGAAAAGATGCGAAAAAGGTAACTGTATTCTTTTCTAGGATCTATCCCTTCTTATTAGCCTTCTTCATTCACTCCTAGAATCTTCACTTCATCTCCTTTGGATTCTCTGTATAAGCTTTTATCAACTGCTGGACAAATATACTTCTAGAACGACAGGTGAGACGCCACCATGGCCTGGAGCTTGTCCCAGTCGGATGGGATCTCCAGGTTAGGAGATAGCACAAAGCCTGCGGCAACAGCAAGCGTGATAACCAGCAGGCTGCCCTTCAGGCAGGCTCCGCCGCGGCTCAACCTTCCAAGGATCTCCTTGGAATACTTGTCCGCGGCCTTGATAGATGCCTGCTTTCCAGAGTCCGTTGCTGCTTCTAGGGCCGCCTCATTCTTAGTCCTTAAGTTCTTCAGAGTCACCTTAAGAGATTCAGCACTGAGCTTATGAGACAGCTCGCTCCATTTTGTGACTATAGTGCTAAGGACTACAACACTGGCTTCAACATTTTCAGGATGAAGTCTTTCCCACAGCTTGTAGGACTCTGCATTTTGAGTCAGGCACCAAATGAATACACCAGCAGACTCCCCGGTGAGGTCTGCGTTATTTTCTTGCATTGCTTTCACACACAATGGCAAAAGCTGCTGTGCTGCTTGTTTCACGGTTTTTGAGCCAGGAGGACCAGCAAGGGCCAACTCCTTGATTGTTGGGTAGGCTGCTTCAAACCTCTCTGTAGCCTTTACACGAGCGCTGGAAACAGGAAATGCAGCTCTCATGAACAGATCAAATGTAACAGGGGGAATCAGGCGTTCCCCCTTTCTAACAGCACCATTCAGTAAGATGCCTCGAGCTTTGGGGGCAGACAAAATTCTTTCGAGCAACTGCAGAACTAAATCTCTCGTCTGGGGATTCCCACTTGGCTTAGCACACAGTGTGGGAAACAGGAAATGAGCCCAACAAAACATTCCAGTCACTAGGTCACCTTGAGATGCCTGAGCAATAACCCAAACAATGATTGGAAGCTTTTCCTGCCCAAGATACTTATTGTTTCCCATTATTTTTGGCAGGACGTTTGTTAGTACCTCTGGTTTCCTTCTTACAGTCAAGGCAAGCACAACAAATATTGCAACCTGGGCCCTTGGAGTTTGCTGTGCGGCCTTCTTTGAACCCTTAGCGCCTACTGCTTGACCTGACAGTTCAGACATGATGCTGTCTATGCACCACATGACAAAGTCTCCCAGGGCATCAGGAGATCTCTGATTGATCCAGTCACTCGCTGTGTTGCGAACTGGTTCAGGAATATGGCACAAGGGAATATCAACCATCTTGGACACTAGTGATTCCTTGAACATCTTCGCCCAGGGGAACTGGGCGGCGCTCACGCTTGCAAATGACCTGCCAAAGTAGTCGGCGAACCGCATGAGCTGAATATCCTGCTGGTTCTCGTAAGATTCCGAGATCTGCACGAGATGCGCCGCGAGGTTCTCGGCGTCGATCAGAGCGGCCGCCTCGGCGACCGTCACCTTGGGCTTCTTCGGCTTCTTCACCTTGGGCTTCTTCACCTCCCCCTCGGGGCGAGTCGCCTGCGCCTCGTCGGAGTCGTCGTCGTCGTCAGAGTACGCGGAGGCCGTGGCGGCGGCGATCCGCGCGGCGTCGGGGTCGGCCGCGTCCCTGGCGGCCAGGAGCGCGCGGTGGCGCTTCTCGGCGTTCCTGTCGACGGCCTCGAACACGTTGACCTTGCCGCCGCCGTTGGGCAGGAACCCCAGATCGGGAGCAGCCGCGGAGGGCAGCGCCGCCGCCCCCTGCTTGCGGTGGCGCTTGGGGTAGGTGACCTTCTGCCACCCGTGCGAGGGGTCGGCGACCACGGCGTCCATCGCGGAGGAGGAGGAGGATGAGCCGGCGAGGTCGTCCATGGCCATGGCGAGTCGAGGTGGGCTTCGTGGAGGCGAGTCGAGGCGAGAGCGATGAGATGAGCGAGTTGCG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0001600.1 | 1 | 1569858 | C | T |
| Osa01LNT0001600.1 | 1 | 1570052 | T | C |
| Osa01LNT0001600.1 | 1 | 1570322 | T | A |
| Osa01LNT0001600.1 | 1 | 1570877 | A | G |
| Osa01LNT0001600.1 | 1 | 1570896 | G | C |
| Osa01LNT0001600.1 | 1 | 1571431 | C | T |
| Osa01LNT0001600.1 | 1 | 1572314 | G | A |
| Osa01LNT0001600.1 | 1 | 1572447 | T | C |
| Osa01LNT0001600.1 | 1 | 1572841 | T | A |
| Osa01LNT0001600.1 | 1 | 1573116 | G | A |
| Osa01LNT0001600.1 | 1 | 1575488 | G | A |
| Osa01LNT0001600.1 | 1 | 1570483 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0001600.1 | osa-miR5530 | Cleavage | 4.0 | 22.177 | 1 | 21 |
| Osa01LNT0001600.1 | osa-miR5794 | Cleavage | 3.0 | 22.121 | 1 | 21 |
| Osa01LNT0001600.1 | osa-miR5819 | Cleavage | 4.0 | 20.072 | 1 | 21 |
| Osa01LNT0001600.1 | osa-miR5820 | Translation | 3.5 | 18.512 | 1 | 21 |
| Osa01LNT0001600.1 | osa-miR396a-3p | Cleavage | 4.5 | 21.397 | 1 | 20 |
| Osa01LNT0001600.1 | osa-miR396b-3p | Cleavage | 4.5 | 21.397 | 1 | 20 |
| Osa01LNT0001600.1 | osa-miR396c-3p | Cleavage | 5.0 | 19.669 | 1 | 21 |
| Osa01LNT0001600.1 | osa-miR166k-5p | Cleavage | 4.5 | 21.245 | 1 | 21 |
| Osa01LNT0001600.1 | osa-miR390-3p | Cleavage | 3.5 | 17.325 | 1 | 20 |
| Osa01LNT0001600.1 | osa-miR529a | Cleavage | 4.0 | 18.186 | 1 | 20 |
| Osa01LNT0001600.1 | osa-miR529a | Cleavage | 4.5 | 15.895 | 1 | 20 |
| Osa01LNT0001600.1 | osa-miR5337a | Cleavage | 5.0 | 21.255 | 1 | 21 |
| Osa01LNT0001600.1 | osa-miR166c-5p | Cleavage | 4.5 | 16.537 | 1 | 20 |
| Osa01LNT0001600.1 | osa-miR166d-5p | Cleavage | 4.5 | 16.537 | 1 | 21 |
| Osa01LNT0001600.1 | osa-miR5523 | Cleavage | 4.0 | 17.337 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0001600.1 | 1 | n+p1a | Resistance or Tolerance | Other soil stress tolerance | C161 | R753 |
| Osa01LNT0001600.1 | 1 | n+s1a | Resistance or Tolerance | Other soil stress tolerance | C161 | R753 |
| Osa01LNT0001600.1 | 1 | qFLL-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Osa01LNT0001600.1 | 1 | yd1a | Morphological trait | Seed | R753 | C161 |
| Osa01LNT0001600.1 | 1 | qFLP-1 | Morphological trait | Culm/leaf | RZ543 | RG532 |
| Osa01LNT0001600.1 | 1 | nan | Physiological trait | Eating quality | C161 | R753 |
| Osa01LNT0001600.1 | 1 | nan | Physiological trait | Eating quality | C161 | R753 |
| Osa01LNT0001600.1 | 1 | nan | Physiological trait | Source activity | RG532 | RG472 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)