© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0312500.1
GTGCTCTAATAACTTACATTTTAGAAAAAGGTTGAGAAGCATAAGACAACTTACAATTAGATATGGAGGGTTTAAATACAGCGTCATCGATCTGTACCAATTGATTTTCTTGGAACCAATGGTTAAGCCAACCCATCAATAACAAATACCACCAAATTATAAACCAGTTAGCTCTACAATATTACAACTTGGTCCTGGCCCTGGGAGAGGTGTCGATGCGCACGTAATTACATCCTCAGCCCAAGAAATTAGCATTCTCTTCAATCCACTAACAAGGCAAAATCGGGCTAGAGAGCTCGTCAATGTGACCCTCATCTACCTGCCTAATATACATACAGACAACGGTTTCAGCATCATCTAAGCCCTTATTTTTCCTGTGGTGAAAGCTACATGAGAATTAGTTGTCCTCTCTAGTAGTCTCTAAGCTACATCTCCTTTCTCTGTCGATTGGGAGAGATGCCGATCAGCGTAATGCAGAAGTCTCCTCAAGCGAAGGACCATATCACAGTGGGACGGCAGGGCGCTTCGTCTCTCCATGTACACCGGGCTCACTGTCATCCATGAAAGGGAGTGGAGCTCGGCAGCCACTGCTTCCAACACGTTGTGCATCTCCGTCTCATGATCACGACCTGCTGCTTCCTGAGTAAAGTTCCTCGTCTGCTTGCCAGAACCTCGGCTCATCTTCTCTTGAACAGCAGCAATGCTGCCTCCATAGTGATCAATGATGCTAACCGAGAGGACGGAGGGTCTGTCCTCATTGGCAAGGCGTGCGGAGTCCTTTCTTACCGGTGGGACGGCTTTGGAGACTACATAGCCCATTGCTAGGGGAATCGCTGTCCCTTTGCTGTGCAGTAAGTGTGCAAGAGGTGGAGACTCTGATGTAAGGCATGTTGGAAGCTGTAATGTTGCTGGCGAAAGGTATCGCATGCTTGGTGAGGGAACTAGGAGATATGATGCTGACATTGACCCAATAGACTTCACTGGAGTAAACCCTTCCAAGTAACTAGAAGGACCACTGCTTGTTTGATTCCCTTCACCAGGAGTAGGTCTGGTCAACAGATCCGCTTGGCATGTGAGATGCAGCGAATGATCTTGGGAAATTGCAACCAAACTGATGCTGCGAACCAAATGCAATGAACCCTTTGAACTGTCCATTCCAGCTTGTTCCACTAGGATCTGCTTTTTGTTGCCTGATTGCCCAAGTGCACCTTTCATGAAGCTAGATTTTGCATGAGGGCTGTACAAAGGGCTAGGTGAGGATGGCATATTTCTGTCTTGCATTAAGCCCATATCTTGTTGCTGGAGTGCTGGCCCATTAGAATTAGATGGAATACCCTCAGGTATAGATCGGCGTAATTGCACAGGCCACTTCTTGACTTCATTACCACCAAATGAGTAAATTGCTTTTTGCCATTCCTGGATTTCAAGTTCAAGGAAACCTCCAATACGGGTTATTATTACATCTCTCGGTCTTGTATTGCTAGACTCAGGTGCAGATGACATTATTTGGCAACCGTGCTGCAGAATTTGGATGAAAAGGCTTTGGAGAACTTTCGTGTCTTGGCGACTACTAATACCACCAAAAGGAAATATTAAACTGTCCAACAACTCTCCCTTAGAATCTGTCCAGATACATACTAACCATCGCCAGTCCTCAGTCCAGCCATAACAGCAATGAAGACTTGCAGCATTGTCGTTATCAGATCCTTCCAGTAAAGCACTTGCACTTGCTCCACTATCAGAGCCACCACCTGAAATTGAGCTGTAAATTCCACTGCCACTAGCATCAACACCAGATTTTGAAGATTCCATTCCACTACTGTAATCGACAGATCCAGGCTCTGCTAGTATGAAAAGTGGCTCAAAGGCATACTTCCTGTCATCTTGAACACATACATCTGGGATCTTATTTGGGTCCATGAATCCTCCAGCACGACCAGGCCATGAGTTGTCCCATGTTACTGATGACCTCATGGATGCATCAAACTCTGTTTCTCTAGAGAGAGTTGATCCAGACATTCGAGGAACTAAACATTCTTTCCAAAGGGTAGGACCAGGAGATGTAGCATGCATCATGGTGGACTGAGACCTGCCCATGTACGCAGGTGACTGAAACATGTCACTTGTGCTAATGGCCTTTGGAATTCGGCGAGCCTTGTTGTACACAGTGAATGCCATGTCCTTCAAAACAGCAAGCTCATTGTTTGGCTTATGGAGTCTCAATAAAGTTTCAACAGTAACAATCTGCAAGACAAGCTTAGGTATACTGAAACCAGAGAGCATCACAACATTAGATGCTGATGATTCATCAACAGAAGCATTGCAGTTTAGGGCTTTGGCAACCTGAGAATATAGGAATGATTTCCTTTCTCTCTCTGGGGATAACATTACCGACCCAAGAGCAACAGAACATTCTACCAGTGTCTCTAGGACAGCAGAAGGTTCGGGAAATGGACAGACTACATAAATTACAGTGCAAGGTCCACTAGTGCTTTCTTTCTGATTTGCCAAGATGCTTGAATTTAGTTTTATGTCCTTTATCACCCTTGTCAGAGATGTCACAAAGCTTTTCACAGTCCAGTTTCTTGAAAGAGCTTGAAGATATTCGCTTGTTGAACTGATGGAACTTGAGTGGCCGTTTCCAATCTTCACTTGATCAGGACACTCGGTGAGAACGAGCCCTGAAGACAAATATTTTCCAGGGGATAGTTCCATTTGCCCTCCACTGTTTTGTGGAGAGTGAGTTCCCAGTTTGCAAACTTCATAAATTGTTCCAAGCTGCAGGAAAAAATCAGTGGCCGCAGAAGTAAGCATTTCAATATCAGGGCACAGAGCATAATAAGTAACAGGCTTTGGTGAAGCATAAGGTTCCAGAGGAGCCTTCTCCCACAAGCTAAGACAATTAGCAGAGGTCTTTAACCAATCATCCTGGTAACCGACAAGCAGAGAAGGCAAAGGGAGGACAGCAACGGTTGGTCTAACACGGTGATATCCCCTATGGTGCTCCAGCTCCGAAGTGCCTCGGTCATTAGATATAACATGACTTGATTGGGGTGGGCTCATTGAATCTCCACCTATGGATATACTGCTTGAGGACTCCCGGATATCACCAGTTGGGTGCTGAAAAGAGTATGCATCTCCCATAGATGCATACTCAGCTGCATTACTTCGACCCCTGCACCAATCAGTCACTAATAATGGACCGTCCATGTTGGCAAAGGCAGTTTTAAGAGCCGCTTTTATATCAGACTGTAACAAGCTAATCACAGATGAGTCTGAAACCTCTGCAGAAAGTGGGTCAACTAAATCAACACCAGCACAATCCTTTGAATGGCACGTTCCTAATATTCCGCCGCAGCCAGCATGAACCATTGAAGGATCACAAGAGAATCCACGTCTCTTTTGTTCATCCAAGGAAAGCCAGAAAAAAGAGCCATCTCCATCATCCATATCAAGTGCGATATCAACAAACGAAGTAGATTGTTGAACTATCAGAGCCATGGCGCTGAGAAGATCCACAATAGGCTGTCTTTTTACAGGCAGACCTTGGCTTGTACCAGTATACGTTTTAGCAGAAAAAGACTCTAGATGTGTTGGCCCTTTAGGTGTCCCCACAGGCTTCCAAACTCCAACATTTTCTAATGATCTGTCATATACTTCATGATCAACATCAATAGATAGCCTAGCTGGTATATTTTCTTTCCTTTTTATGTCATATTTGGGGACAAGATCTAACTTGTTGCTGACATCTGTATGCACAAGACTGGATAATGCACTTTTTAGCTCAGCAGATGCTTTGCTACTCAAAGACAATAGTGTATGCCTTATTCTACACATGGCAGCCTGGAACTTGATACATTCCATTTCAGTTGCAAGAGCAGTCTTCATAGATAGTAGGAAGTATCCAGCATTAAACATGCTGTCACTCTTCCTTTGAGAAACCACAGAAGAATCAAGTGAAGTCTCACCAGAAATAGGTCTTGATGCTTCCTCCTTGCCTGATTGTATGTCAGTGTTTTTTAATCCTTTGTCACTTTCTTTTTTCCCAACTTGGACAACTGTGTATAAGTTTGATGAACCAATATCACGTGAAAGATTACCAGATGCTAGTCTAACAGACTTCTCAGGCTTGTCTTCTCCAGACTCCATTTGAGAACTTTGTGCAGCATCATATGAATAAACTCTTGAGTTAAAACTAGAACTCCCTGGTTTTATGGATCTGGGCTGGTAAGGATTTGTAAACAACGATGTTGGTGTCTCACCGGTGGAAATTTCAATAGCTGCATACTCGGGTGCATAAGTGAGCAATGCTTCAGCTCTGGTCAGATGACTAGATCTACCAGACGATAACACAACTGATTGGGAGCTTGTAGGCGACGCAATATCTTTCTGAGGCTCTTGAACCTTAGAAACAACATCATGAATAGGTGCTACAGTTTGGTGGTTAAATACCTCCAAAGATGAGAGACCAACTGGAGAAAATCTTTGTTCAGGTATATCCATAGCTGTCGACGGACTATCTGTGAATGTGGCATCCCCACAGTCAGGACCGGGGATCACCAGAGAATGTGATTCAGCAGTACCTGGAGGCTCACCAAAGTCTAACTCCTCTTCTTGAAAGAAGTCACTAAAATCTCCAAACTCTGATATTAGTAAATTGATGTCCATCGCAACCCCCTCCTCATCCCAGCCCCAAGAACATCTACCTTGACCATTTACCCCTTGATTGTTATCCACGGATTCTTTACCAGCACGAGAAGAAACTTCTGGTATTTCAGAACGAGGCCGCTTGGATACCATCTTGCTACCAGCAATGTTGGATGGCAGATCAGACTGATGGCATGCCATAGAGTCTGCATCAGCTGAAAGGTCACCACCTTCAGCAGCAACTGCATGTTCACTTCCATTGGAAGTGCTACTAACACTACTGATACTACTGGCCATGCTGCTGTAATTGCTGTTCTTCTGTCTCCTTAGTCTTAGAAAATTAGAGTTCACTCCAAGTCCACGAGATGATCCAAGGCAAGAGCTGTTCCGAAAGTAAGAAGATGGAGAAAAGTTCCAGAATGGCCATCCCTCCCATGATGAATTTCCCACACAGGCCTGTGAACACATTCTTTTACTAGAAAAGCGAACAAATGCCTGATGGACCATGGGTACCATAACAGCCTCGGGGGGGTATATAAATGTCCTTTCAAGAACTGGAACACTATCAGCAGATTCTAGCTTTTGATGTTCATCAGCACTTAACTGAGGGTCCTTCGCTGAATCTAATTCTTTTTTTATTTGATTATTTTCCGATTCAGGAACTTTGTCAGTTGTGGCAGCTGGAAAACCAAGGGCAACTTCAACATAGTAGCTTTGCCCTCTCAATTGGCACATGGTAGGTTGAGTAAAACCAGGTAAAGTAGCTGCCGATAATTTGCTTGAATATACTTGTCTCACAAGATCACTTGGACAACAACCAACAAGCCTACCCAGCATTCCACTAGGAGCAACTATTACTGGAAGACCTTCGCCAACAGAGCGAGGAGAATGTGTGAGAACTTTCTCTATATCATCACTGCAAAGATTCCTCATGTACCTTGCAGATATTATCACATGCACAAAGATTGCTTCCTCGGTGGCAGCAAAGACAAATTCTATTGTAGGCTGTGCTCGCCTAAAGCTGTTCTGATTTCTTGTAGGGGGGTAATATTTTGTAAAGACATCACCAAATCTTGCATAGGAAAGTCCTCGTAGTGTTCTTTCTAAAGAATTTCTTAGGGCCTGACAGAGTGCAGCTGCAACCTCTTCCAAGTTGCCTGGGGCTACCCATAAACCATTTGAAACAACTCTTAATTTGGCTACAGCATGCTGAGCTATTTCAGGTACAGACGAGTGACGGCCAGGAAGAAACAACCAGAGCTTGATCTTCTCATCAGGGTTATGCTCTCCTTGGGATGGATCCCATGGACCAACAAAGGAATTTGTCCAAGTACTTAAGAAACCTTCACTCTGTAAGTGAAGATGTGCTGACAGCACAATGTTGTTAAGAGCATCTTTCTGCTCAGCTTTTGAACTTCTCTCAGAAGCTGTACTTGGATCTGGTTCAACAGGAAGAAACTGAAACCACGATACATTTTGGAGCTCCCCAAGCTTGAAGATGTTTGTCCACATATTCTGTTGGTTTATGCGATTACCGGAGTTTCAGCCTGGAAAGTACAAGCCTATAAGATGAGGCATGCAACATGTACCTCTATCGGAGAAGCGGCTCGGTGGGCGGCGGAAGAGGTCGGCGACTTGCCGCCGGTTTGAACCGGAGAAGAAGGGGGCGGTGGTGGTCGGGTCAGTTCGCTCCGCCCTCGACCTGGAGTGCCCCCGCTCCCCCGTGGCCCCACCACCTCCTTGCTCACCGTGCGGTTCTGATAAAAAATAAAAGAAAAACAACCCATGGATCAACTTTCTAGTCAGCCTGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0312500.1 | 5 | 21953156 | A | C |
| Osa05LNT0312500.1 | 5 | 21943921 | T | C |
| Osa05LNT0312500.1 | 5 | 21947761 | T | C |
| Osa05LNT0312500.1 | 5 | 21946271 | A | G |
| Osa05LNT0312500.1 | 5 | 21948546 | A | G |
| Osa05LNT0312500.1 | 5 | 21948642 | T | C |
| Osa05LNT0312500.1 | 5 | 21949656 | T | A |
| Osa05LNT0312500.1 | 5 | 21951479 | A | G |
| Osa05LNT0312500.1 | 5 | 21951914 | T | A |
| Osa05LNT0312500.1 | 5 | 21954293 | G | T |
| Osa05LNT0312500.1 | 5 | 21955396 | C | T |
| Osa05LNT0312500.1 | 5 | 21955474 | G | T |
| Osa05LNT0312500.1 | 5 | 21957778 | A | G |
| Osa05LNT0312500.1 | 5 | 21958439 | C | T |
| Osa05LNT0312500.1 | 5 | 21953386 | G | A |
| Osa05LNT0312500.1 | 5 | 21946057 | T | A |
| Osa05LNT0312500.1 | 5 | 21959236 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0312500.1 | osa-miR5532 | Cleavage | 5.0 | 8.918 | 1 | 22 |
| Osa05LNT0312500.1 | osa-miR5534a | Translation | 4.5 | 14.028 | 1 | 21 |
| Osa05LNT0312500.1 | osa-miR5534b | Translation | 5.0 | 14.028 | 1 | 21 |
| Osa05LNT0312500.1 | osa-miR5817 | Cleavage | 5.0 | 13.368 | 1 | 24 |
| Osa05LNT0312500.1 | osa-miR5818 | Translation | 4.5 | 14.604 | 1 | 21 |
| Osa05LNT0312500.1 | osa-miR5825 | Translation | 5.0 | 14.542 | 1 | 24 |
| Osa05LNT0312500.1 | osa-miR5828 | Translation | 5.0 | 12.539 | 1 | 21 |
| Osa05LNT0312500.1 | osa-miR5831 | Translation | 4.5 | 15.221 | 1 | 24 |
| Osa05LNT0312500.1 | osa-miR1440b | Translation | 5.0 | 11.545 | 1 | 21 |
| Osa05LNT0312500.1 | osa-miR5512b | Cleavage | 5.0 | 14.464 | 1 | 21 |
| Osa05LNT0312500.1 | osa-miR7694-3p | Cleavage | 5.0 | 17.85 | 1 | 22 |
| Osa05LNT0312500.1 | osa-miR398b | Cleavage | 4.0 | 14.462 | 1 | 21 |
| Osa05LNT0312500.1 | osa-miR168a-5p | Cleavage | 5.0 | 16.135 | 1 | 21 |
| Osa05LNT0312500.1 | osa-miR171d-5p | Translation | 4.5 | 21.854 | 1 | 21 |
| Osa05LNT0312500.1 | osa-miR444a-5p | Translation | 5.0 | 23.179 | 1 | 21 |
| Osa05LNT0312500.1 | osa-miR444a-5p | Translation | 5.0 | 18.28 | 1 | 21 |
| Osa05LNT0312500.1 | osa-miR395v | Translation | 3.5 | 8.918 | 1 | 21 |
| Osa05LNT0312500.1 | osa-miR1425-3p | Translation | 3.5 | 20.492 | 1 | 21 |
| Osa05LNT0312500.1 | osa-miR1853-3p | Cleavage | 5.0 | 19.807 | 1 | 22 |
| Osa05LNT0312500.1 | osa-miR1854-5p | Cleavage | 4.5 | 17.976 | 1 | 21 |
| Osa05LNT0312500.1 | osa-miR1876 | Cleavage | 5.0 | 23.396 | 1 | 24 |
| Osa05LNT0312500.1 | osa-miR2092-3p | Cleavage | 4.5 | 22.279 | 1 | 22 |
| Osa05LNT0312500.1 | osa-miR2094-3p | Translation | 5.0 | 24.101 | 1 | 22 |
| Osa05LNT0312500.1 | osa-miR2099-3p | Cleavage | 5.0 | 20.64 | 1 | 20 |
| Osa05LNT0312500.1 | osa-miR2872 | Translation | 4.5 | 14.402 | 1 | 21 |
| Osa05LNT0312500.1 | osa-miR3981-3p | Translation | 4.0 | 12.822 | 1 | 21 |
| Osa05LNT0312500.1 | osa-miR2873b | Cleavage | 3.5 | 15.098 | 1 | 21 |
| Osa05LNT0312500.1 | osa-miR5073 | Cleavage | 5.0 | 14.392 | 1 | 23 |
| Osa05LNT0312500.1 | osa-miR5144-5p | Cleavage | 2.5 | 15.322 | 1 | 21 |
| Osa05LNT0312500.1 | osa-miR5150-3p | Translation | 5.0 | 17.526 | 1 | 24 |
| Osa05LNT0312500.1 | osa-miR5497 | Translation | 4.0 | 19.071 | 1 | 21 |
| Osa05LNT0312500.1 | osa-miR5512a | Cleavage | 5.0 | 14.464 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0312500.1 | 5 | nan | Physiological trait | Eating quality | RM305 | RM178 |
| Osa05LNT0312500.1 | 5 | nan | Physiological trait | Eating quality | RM305 | RM178 |
| Osa05LNT0312500.1 | 5 | qNBL-5 | Resistance or Tolerance | Blast resistance | RZ649 | RZ225 |
| Osa05LNT0312500.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0312500.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0312500.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0312500.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)