© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0028100.1
GACAAATAGTATGATAAATCCAAAGTACATTATTTCATATCGTAATTTAGTTCACAATGACATGATCTTGTTCGGTACACAATACTACAATTTAACAAGCCAAGTATGTACATTATTTAAGTAGTGCAACAAATATAAGCAGAGCTTGAAAAAGAGCAAAGCACGGTGATCTGACCATAGGATAGGTAGAGCTGAGGTGCTTAAGTCACAAAAGGCAAAGGTAAGCCTGAAAACATAATGCATCATCCAGAACTTCGTCTGACGATCTAACCATAGTGCCACACCATGATGAGGGAGGGAAAGCTCACAGCGCAGCAACACCATGCTACCAGACATCAAGCATCAGAATCCCACAAACAATACCTCTTTTGAGGCCTGCAGAAAGAAGCAAAAGCTGGCTGCCTGCCTTACCTTCCACACCCACACAAAGTCAATCAAGTAACAATGATGATAAGGGCCTTACCAAAGACCATATATACACACATTGATGCCTTCAGATTTTATTTATGTGTGAGCTTTAGTATCGCCACTGTACCAGTTGCCAGTTCTAGTTATCCGAAACCTCCACGCCAAGTTTCTTCGCCTCCATCTTGAGAAACTTCAGGTATCTAACAGCTTCTTCAATGACAGAGGCTGTATCCAATTGGTCTCCACCAGGGATTATTCCCCTAAGAACTGTGACCATATTTCTCATCCTCTCATGAGTAACAGTGTCCATGGATCCATGGAAGACTGAACTCTGGCTAGAAGAATGATGCATTTTCCTAGACCTTGGTGGTGAAGATGAATCAAGGGAATCACTCTCGAAGCAGTCCGGAGTACGCCCAGTACTCTTGACATCATCTTCATCGCTTTCTTCATCAGAGCTTAGCAGTGCATCAATCTCTCTTGTATCCTCCTTGAAAGATGAGGAAACTTCTTCCAGGTTTCCGTTATCTTGGCCGGAACTTCTGCAAATTGGCTCGGGATAGGAAGGGAAAGCATTGGTGGCTGAAGGGTTTAGCTTGCTCACCAATGCAGGATGACACATGATGCGCCCTTTGTCATCAGTTTGATCAAAGATGATGAAGTTTCTGGGGCATACCTTGGAAGGCTGAAACTCAAATCCACCGAGTGAGGTTCGGAGTTGAGGACTGGTCATGCCTGAAGGGGCACCAAAGGCAGGTGAAACAGGAACCCTGTAGTTGCACTGACCACCCAAGGGTCCATTTGCGATATAACCATCTGCTTCATGTCCATAAGCAAAGGAAGGGTTTCCAGTGAATGCTGTTGGATCCCTCTGCATGAGTCAATGGCTGATACTGGACAGAACGCACTTAAGTACAGACCTCTACCTGATCTGATGTAGTAGCTACACTACCCAAAAACAACGAGAATTCTACAATATGTTTGCGACTCGCAACAACAAGAGACTAAACACCCTACCACAAGGTAGCCATCATGAATGCACTGCTTTTGTTGTTGCGACTTTATACCAGACGAAAGATAAATAGCAGATAAAGTGACTAATCTCGACTCCTGTATTTGGACTACGTGACAGGCTTAAGCAATTGACGGAAGTACTCAGCCTGCAATTTAGAATATTTTGTTAAAATACAGAAGAGACACATAGTAAAATAAGGTATACAAAGATGCCTGAATAACTTAATAAATTTATACTAAAAAATAAAGTGAACTGATAAGTATATGTATTATTTGATTCAGGTATGCATTAGCAAATCATGTAAAAAGTCTTGAGGACAAAACAACAAAATATCTATTTATGGTAATCAAATAATCATTTATCGATAACACCGTTCAATTTCATGAAAAGAAATAATGATTGATCAATCAAAACTTTCTAGCATAACTCAAGAATATCAGGGTCACTGGGGGAGGGACAGGGAAGGGAAGAGACTGAAACCCCACATCATTTTAAATTTCATCTGCAATAGCACTACATGGTCCAGGATTACAGGTTAACAATGAGAACATGACCAGATCACCTATACAATATGCATTCCAAAACCCAACTAAATTAATTAGCTATGCTATAATAGAAAGATCTCAAACAGTTACATAGGTGTAGATAGTTGATGGGTGGTACTTTTCACTATACGAGATTATTGTGAAAATCCCAAACAAAGTACCAAGAATGTTTCCATGAAAAATGACACCTGATTCTCATTTTTTGTTTAGCAACAGCTATGAATCATTTTGGAAACAGGATTCTTTAGGTCAACAAATAAATATCTCACCTGGCACACTTGCATCAACTGGTAATAAGCAAAGATCCTAACATTCATTACTATTGTTCCCACCTCCTTCACAATGCGGAATCTCTTAAGTTCAACCTTAACATACATTCTCAATTTTTACACACCCAATGTCGTCAAGAACAAAGAACCACAAAGGAAAAGGATTCTCCTGTAAATGTGACCGCCTCACACAATCACACGGAAAAACACAGCAAGGTGAACAGACTTTCGGCTGCTGTAATAAGTCGAGTACAAAGGGGTCCAAGGCATACTGCTGCTCAGTGCTTAAGTTTTGTTATATTCCTGCAATCCTGCAGAACCAGAAGGCTACAACCAAATCGAGCACCGTTGGGCAGGTACGGCGAGGGCGGGTCTCGACGAATTCGTCGGCGGCGGGGAGATCAAAATCGGATCTTGGAGGCGATCCCGAGGTGGCGAGGCGCTCGTGGCTTCGTGCAGCAGCAGCAGCACCAAGAAAAAGGAGGGGGATTTGGGGGGGAGGAGAGGAGACGACAGGAGCGGAGAAGACAACAGGAGCAAAAGGGCAAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0028100.1 | 1 | 25031927 | A | G |
| Osa01LNT0028100.1 | 1 | 25030344 | T | C |
| Osa01LNT0028100.1 | 1 | 25030469 | T | C |
| Osa01LNT0028100.1 | 1 | 25031199 | T | C |
| Osa01LNT0028100.1 | 1 | 25031653 | A | G |
| Osa01LNT0028100.1 | 1 | 25032445 | A | G |
| Osa01LNT0028100.1 | 1 | 25032756 | G | A |
| Osa01LNT0028100.1 | 1 | 25032789 | A | G |
| Osa01LNT0028100.1 | 1 | 25032871 | T | A |
| Osa01LNT0028100.1 | 1 | 25033159 | C | G |
| Osa01LNT0028100.1 | 1 | 25031307 | G | A |
| Osa01LNT0028100.1 | 1 | 25030013 | T | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0028100.1 | osa-miR5543 | Translation | 4.5 | 11.837 | 1 | 21 |
| Osa01LNT0028100.1 | osa-miR390-3p | Cleavage | 4.5 | 17.51 | 1 | 20 |
| Osa01LNT0028100.1 | osa-miR444a-5p | Cleavage | 4.0 | 13.002 | 1 | 21 |
| Osa01LNT0028100.1 | osa-miR2868 | Cleavage | 5.0 | 18.724 | 1 | 20 |
| Osa01LNT0028100.1 | osa-miR5159 | Translation | 5.0 | 13.165 | 1 | 24 |
| Osa01LNT0028100.1 | osa-miR5505 | Cleavage | 4.5 | 23.882 | 1 | 22 |
| Osa01LNT0028100.1 | osa-miR1877 | Translation | 5.0 | 9.962 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0028100.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0028100.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0028100.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RM129 | RM5 |
| Osa01LNT0028100.1 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Osa01LNT0028100.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0028100.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0028100.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0028100.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)