>Osa05LNT0313100.1

TGCCACATTTGGCATTCCTCAGATGTATTCAGTACTTGAGATGACACTCTGTAATATGCATGTAACATAGAACAAGAAATACATTTATCGCTTGGTTTTGAAATTGCATTGCTTATTCAAGTTATTTATTGCTCTTGTGCATACAGAGCTTGTGAATTGCAAAGAAGAACCTTAGGCAGCACATAAATTGTTCAGAAGAGCTAAAAATTACCAGTGGC

Explanation	CPC Score
noncoding	-1.19042

Transcript ID	Chromosome	Locus	Ref	Alt
Osa05LNT0313100.1	5	22389847	A	C

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa05LNT0313100.1	osa-miR1428e-5p	Cleavage	4.5	17.021	1	22
Osa05LNT0313100.1	osa-miR1428f-5p	Cleavage	4.5	17.021	1	22
Osa05LNT0313100.1	osa-miR1428g-5p	Cleavage	4.5	17.021	1	22

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa05LNT0313100.1	5	nan	Resistance or Tolerance	Drought tolerance	C43	RZ70
Osa05LNT0313100.1	5	nan	Resistance or Tolerance	Drought tolerance	C43	RZ70
Osa05LNT0313100.1	5	APAGE1	Physiological trait	Eating quality	nan	nan
Osa05LNT0313100.1	5	qNBL-5	Resistance or Tolerance	Blast resistance	RZ649	RZ225
Osa05LNT0313100.1	5	QPl5	Morphological trait	Panicle/flower	RG13	RG346
Osa05LNT0313100.1	5	nan	Morphological trait	Seed	RM163	RM31
Osa05LNT0313100.1	5	nan	Morphological trait	Seed	RM163	RM31
Osa05LNT0313100.1	5	nan	Physiological trait	Eating quality	RM163	RM31
Osa05LNT0313100.1	5	nan	Physiological trait	Eating quality	RM305	RM178
Osa05LNT0313100.1	5	nan	Physiological trait	Eating quality	RM305	RM178

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus