© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0313200.1
TTGTAGTTTGCGTTCTGTTCTTCTTCTCCAGGCCAAAGGCCTCCATTAGTAGCTTACAATTCAGGCATTACATCTAGCTGTAAAAACATAAAGACAAGAAAAGTAGCATCAAAACAACATCTGAAGCGTGATTCCTGCTAAAAATGAAAAATGACAACTACAGTGGTCTCCAAGTGATCTCGTCCATCCGATCTCCCTTTCTTTTCTCCATTGCCGTTGGATTCATTACTTCACTTTTGAATCGTTCTCTGAACATTCTGAACTTCTCTGAATTCCCTTGTCTGAATTTGGTCCAGAATTCCATTTCCCTCTTATGCTCCTGACAATACCCCCTCCTCAATAACAACCTTGTCCTCAAGGTTGAAAATTTGGAAACACAGCTTGAATGTATGATGCGTCCTCCCAGGTAGCGTCTGCAGGAGTTAAATTCTCCCAAAGAATCAGCCACTGTATCACAGGTTCATTATGCCTGGGAACCATTCTTCTTTGTAAGATAGCAGCTGGTTCAGTCTTGATTTGGCCATCAGGTCCTACTGCAGGTAAATTGGGCATTGGTATAGCTCTAGGCCCCAAATGTTTCTTCAGCTGGCTTACATGAAAAACAGGATGAATCCCAGCTCCCTCCGGCAACTGCAACTTGTAAGCTACTGAACCCATCTTCTCAATGACCTTGAATGGTCCATAAAATTTGGACCTGAGCTTCAATGAGCCCCTGATTCCCATAGCCACTTGTCTGTATGGTTGTAGTTTCAAATACACCATATCCCCCACTTCTAAGGTTCTTTCAGTTCTCCCCTTGTCAGCATAAAACTTCATCCTTCTCTGGGCCTCTCCCATACTGCCCTTCAACTTCTGCAGGATCATTGCTTTATCTTCTAAAGTTACTCTGGCTTCTTCAGAAATATTGCAGGGAATAGAAAACTCACTAATTTGTGGAGGGGGATACCCATACAGAGCTTGAAATGGAGTCATTTGGATGGATGTATGATATGTAGTGTTATACCACCATTCTGCCAATGCAAGCCAAGAAAACCATTTCTGTGGTTCCTGAAAGGTCATGCTGCGCAAATAAGATTCAAGGCATTGATTTACCCTCTCTGTTTGCCCATCTGTCTGAGGGTGATGTGCAGTGCTAAATCTGAGCTTAACCTTATGTATTTTAAAAATCTCCTGGAAAAATGTACTGGTAAATACCCGATCTCTATCAGTAACTATGGCGATAGGCATTCCATGCAGTTTATGTATGTTATCCATAAATATCTGTACCACCTGCTCCACAGTATAAGGATGAGACAATGCTAAGAAATGTGTATATTTTGTTAACCTGTCAACCACCACCAAGATAACATCCTTCCCCTGAGATTTTGGTAGTCCCTCAATAAAGTCCATGGAAATATGAGCCCATGCCATATCAGGTATTTCTAGAGGATTAAGTAACCCTGGAATGTGAACATGTTCTGCCTTAGTAACCTGACAAGTGGGGCACTCCCTGATATAATGCTCTACTTGCCTCTTCAGACTAGGCCAATAAAACAGCTGCTTAATTCTATGATATGTTGCCCTGATCCTAGAATGTCCTCCAAAACATGAGGTGTGGTAGACTTCCAGCAGCAGTTGTCTAATCTCAGTTGTTTCCCCAACATAGATCCTGCCCTTGAATTTCAACAATCCAGATTCACACTTATAGTTTCGTTCTGGATCACCATCAGTATCAATCAGGCTTAAAATCTTGTGTGCCAAAACATCCTCTTCATAACTCCTCTTAATATCTTGTACCTAATCAGGAACAACTACTGTCATGGGTAAACATTGTTCTTCCTTCAAGTTAGGACTTCTAGAAAGAGCATCAGCCACCAAATTCTCTTTTCCAGATTTGTATTCAATTACATAATCAAACTCCATTAATTTCAACAACAGTTTGTGTTGGATCCCTTCTACTAGTCTCTGACTCATCATGAATTTAAGACTCTGTTGATCAGTCTTGATGATTAATTTTCCTCCCAACACATAATGTCTCCACCTTTTAAGAGCTTCCAAAATTGCCATAGCCTCCTTTTCATAAACTGACTGTGCAGCTGCTTTAGGTCCCAGAGGTTTACTGAAGTAAGCTATTGGTTTTCCCATCTGCATTAATACTGCTCCAATCCCTACTCCACAGGCATCAGCCTCAATTACAAATGGTTAACTGAAATCAGGTAGAGCCAATACTAGGCTAGTACACATCCTTTCTTTCAATAATTCAAAAGCCTTCCTTTGTGGTGCACCCCACTTAAAACCATCTTTTTTAAGCATATCATGTAGGGGTCTGCAAATCACTCCATACCCCTTAATAAACCTCCTGTAGTACCCAGTCATCTCCAAGAATTCCCTTACTTCAGTCACATTTCTAGGAGCTTTCCTATTTTTGATCGCACAGATCTTTTTGGGATCTGTGGACACTCCATCTTCTGAGATAATGTGTCCCAGGTAGTTCACCCTGTCCAGCCCAAAATCACACTTCTTCAGCCTCACCACCAGTTGGTTTGCTGCCAATGCTTGCATCACCAACTTTATATGCTCCAGATGTTCAGACTGATTTTTGCTATAAATCAATATATCATCAAAGAAAACGAGCACAAACTTCCTGAGAAAAGGAGCCAAAACCTGGTTCATTAAAGCCTGAAAAGTAGCTGGAGCATTGGTCAAGCCAAATGACATAACATTATACTCATAGTGACCTAGGTGAATTCTGAATGCAGTTTTTGGAATATCTCTCTCAGCCATTCTAATCTGATGATAACCTGACCTCAAGTCTAACTTCGAAAATATTTTAGCCCCATGTAACTCATCCAATAGATCTTCAATTATTGGCATAGGAAATTTGTTCTGGACAGTCTGAGAATTCAACTGCCTATAATCCACACACATCCTCCAGGATCCATCTTTTTTCCTAACCATGACAGCAGGTGAGGCATAAGGGCTGTCACTAGTCCTAATCTCTTCTGTTTTGATCAACTCAGTGATGATATCTTCCATTGCCTCCTTTTGGTAATGTGGGACCCTATATGGTCTGAGATTAGGTGGTTCTGATCCTGCTTTTAGATTAATAGTGTGATCACATTCTCTCCTAGGAGGTAATCCCTTCGGCTCAATAAGCACATCTGGGAATTGTTGCAAGATTTTCTGGATATTTTCAGGAATCTTTGCCTTCTCTTCCACATCTTCACTAATGGCATTTATCTATATGATGCAGCCCAATGCACCTTTTTTAACCATCTTCCCCATTTGTTTGTTGCTGACCTGAAAATATTTTCCAGGCTTGGTGAAATCTTGAATTTCCATCACTTTTCCTCCTTTAGTCACCCTCATCTCTCTTTTCTTGAGATCTAAAGAAATTGGGCTGTACTTGTATATCCAGTCAGCTCCTAGTATGATATCATACTTCTGTAAAGGCAATAGACTGAATGCATTGGTGAAAATTTCCCCTTGAATCTCATAGTCCATCTCTGGCACCTGTAATTCTGACTTTAACTCCCCTCCTCCAGCTACTATCACTTTCTTTATCTTAGTATTCATCAAATGACATTGGCTCTTTAAGGCAAATTTGTGATCCATGAATGTCCCAGTACTTCCACTGTCAATCAATCGTACTGCTTTCCTCCCATTCACCTTCAGCAAAACAGAAAAAGTATCAGGTCGGTCAAAACCATATACAACACTCTGGGATATACTCAGCAGCTCTTCTGCCTTCTCTTCCTTCTTCTCTTCCTGTTCAGCTTCAATGGGCTGCTCCTCTTCTTCCATTTCTTCCCCCAACTCTTCAGTCTCATCACATTCCATCAGTAAGGCATGTATAGCTTGTTTCACCTTACATTGATGCCTTGGAAACCATGGCTCCTTACAAAACCAGCATTTCTTCTCCTCCTTCTTGTCACCATCCATCCTTGGTGGTCCTTTGTTTACCACATTCTTAACTTGATTTCCCCCATTTGGAGGTCTGTTTCTATTGAAATTATTAGCAGCCTTCCTGGAATTTGCAGCCTTCTCATATGTTTTAGCATACCAGTAAGATTCCAACAGACCCTGTGGCTTCTGCCCACAAACATCATGCTTAATTTCTCCTCTGAGGCCCCCAATAAAGCAACTAGTGAAATACTGCTCTTGCAAGTATGGATGGTCCCTCCTAACCAGATCCATATAGTCTTCAAACTTATCAATATACTACTCTACTGTCAATCCATACTGCTTAACATTCTGGAATAATTCTACAGCTTCATGCACATTTGCAGTAGAGAACCTGGTACATAACATAGCACACCATTGTGGCCAGGTAATCACTTGCCATGGCAATCCTATACCCCTGAACCATTTGGCTGCCCTTCCATATAGATGAGCCACTGCTAGGTTGACCCATTGATCCACTGGAGTTCCAGTGATCTCAAAGAATTTCTCACACTGTTTTAGCCAGTCTACAGGATCTTCACCAGTAAATAAAGAGATTTCCAATCTAGGACCCTTGATTACAGCCTCAGCATAATGATTCCCTCCACTAGTAGGTGCCCCAAAGCAACTCCTCTGTGGATCAACAAAGTGAATTCCCTGATTCCATTGGTTAGGTCCCCTATTAAATCCAGCTTGGAAATTGGGAATACCTCCCTGATATCCCCCATGATTTATAGGAGCTCCAAAAACAGAACCTCCCATTCTACCAGTAAAATTCTCTCCTTGAGTAAACACAGTTGGCTCAGGTCGAGTGGTGTCAACACCTGGGCCACTACTGCCCCCCATTTGACAAAACAGACTCTTCTGATTCATTGGTGCAGAGGGTATCACAACGTTGGGTTCGATTTCAAAACGTACCTCAGGTGCAGTGGAGGGAAAAACCACTCCAGTACTCGGCCCAGCAGCGTCAGTACCCTGTCCCGTTGATCCCTTAACTGCTGTAGTAGCATCTGCTCCTTCTCCACCCTGATCTGCCATTTTCTTTTGCTTACAGAGTTCACGCAGCAGCTCTTTGATTTCCTTGACCTCCCCCTTGAGCGATTTCAGATTTGTTACCTCCTTTTTCAGGGTCACCATGTCAGTCCTGAACTCGTTCATCTCTTCCAAATCCACCATCGATTCGCTGGAGCGCGTCTTCGTCATCTTACTCTACAGGATTGGTTTGGAACAAGTTCCTCCCCACTAGATCCTATCAGAGATGGGTTTACCACCGCCAATTCTTAGTTGCGAGCTCCGGAGATTTCATAGGGGCACACACCTTGGTGGCTCCCAAACCCTTGCTCGAGCAACCAAGAACACCACCACGCCTCCGGATTGATTCTGCCCGGGTTCAGGAATTTTACGATGGATCTCACCGCCGCCTTCCACCAACCCTCACCGGACAAGATCAAGAGCCAAGAATCGTGCTTGCTCTGATACCTCTGTCAAGACCCTGAGTGCGAAATGGAAGAAACAAGGGAAAACAGAGCAGCGATTTTAGGGTTCTAAGCTACTTTAGCTAATCCTAAGACAAAGTAAATTGTAGTTTGCGTTCTGTTCTTCTCCAGGGCCAAAGGCCTCCATTAGTAGCTTACAATTCAAGCATTACATCCAGCTGTAAAAACATAAAGACAAGAAAAGTAGCATCAAAACAGCATCTGAAGCGTGATTCCTGCTAAAAATGAAAAATGACAACTACAGTGGTCCCCAAGTGATCTCGTCCATCCGATCTCCCTTTTTTTTCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0313200.1 | 5 | 22435376 | A | G |
| Osa05LNT0313200.1 | 5 | 22432789 | A | G |
| Osa05LNT0313200.1 | 5 | 22430054 | A | G |
| Osa05LNT0313200.1 | 5 | 22430552 | T | C |
| Osa05LNT0313200.1 | 5 | 22430855 | T | C |
| Osa05LNT0313200.1 | 5 | 22432465 | T | C |
| Osa05LNT0313200.1 | 5 | 22432517 | A | G |
| Osa05LNT0313200.1 | 5 | 22432993 | A | G |
| Osa05LNT0313200.1 | 5 | 22435652 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0313200.1 | osa-miR5803 | Cleavage | 4.5 | 21.392 | 1 | 24 |
| Osa05LNT0313200.1 | osa-miR396a-3p | Translation | 4.5 | 21.161 | 1 | 20 |
| Osa05LNT0313200.1 | osa-miR396b-3p | Translation | 4.5 | 21.161 | 1 | 20 |
| Osa05LNT0313200.1 | osa-miR1428a-3p | Cleavage | 4.5 | 14.992 | 1 | 21 |
| Osa05LNT0313200.1 | osa-miR1428a-3p | Translation | 5.0 | 19.601 | 1 | 21 |
| Osa05LNT0313200.1 | osa-miR1847.2 | Translation | 4.5 | 23.693 | 1 | 24 |
| Osa05LNT0313200.1 | osa-miR1428b | Cleavage | 4.0 | 19.601 | 1 | 21 |
| Osa05LNT0313200.1 | osa-miR1428b | Translation | 5.0 | 14.992 | 1 | 21 |
| Osa05LNT0313200.1 | osa-miR1428c | Cleavage | 4.0 | 19.601 | 1 | 21 |
| Osa05LNT0313200.1 | osa-miR1428c | Translation | 5.0 | 14.992 | 1 | 21 |
| Osa05LNT0313200.1 | osa-miR1428d | Cleavage | 4.0 | 19.601 | 1 | 21 |
| Osa05LNT0313200.1 | osa-miR1428d | Translation | 5.0 | 14.992 | 1 | 21 |
| Osa05LNT0313200.1 | osa-miR1428e-3p | Cleavage | 4.0 | 19.601 | 1 | 21 |
| Osa05LNT0313200.1 | osa-miR1428e-3p | Translation | 5.0 | 14.992 | 1 | 21 |
| Osa05LNT0313200.1 | osa-miR1876 | Translation | 4.5 | 8.681 | 1 | 24 |
| Osa05LNT0313200.1 | osa-miR2095-5p | Cleavage | 4.5 | 17.926 | 1 | 22 |
| Osa05LNT0313200.1 | osa-miR2275a | Cleavage | 5.0 | 15.742 | 1 | 22 |
| Osa05LNT0313200.1 | osa-miR2275b | Cleavage | 5.0 | 15.742 | 1 | 22 |
| Osa05LNT0313200.1 | osa-miR2864.2 | Cleavage | 5.0 | 11.076 | 1 | 21 |
| Osa05LNT0313200.1 | osa-miR5159 | Cleavage | 4.5 | 22.869 | 1 | 24 |
| Osa05LNT0313200.1 | osa-miR5488 | Translation | 4.0 | 18.59 | 1 | 21 |
| Osa05LNT0313200.1 | osa-miR5499 | Translation | 5.0 | 9.748 | 1 | 21 |
| Osa05LNT0313200.1 | osa-miR2275c | Translation | 5.0 | 14.878 | 1 | 23 |
| Osa05LNT0313200.1 | osa-miR5523 | Cleavage | 4.0 | 20.575 | 1 | 22 |
| Osa05LNT0313200.1 | osa-miR5523 | Translation | 5.0 | 14.425 | 1 | 22 |
| Osa05LNT0313200.1 | osa-miR5524 | Translation | 3.5 | 13.432 | 1 | 21 |
| Osa05LNT0313200.1 | osa-miR5160 | Translation | 5.0 | 16.943 | 1 | 22 |
| Osa05LNT0313200.1 | osa-miR1866-3p | Translation | 5.0 | 16.943 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0313200.1 | 5 | nan | Physiological trait | Eating quality | RM305 | RM178 |
| Osa05LNT0313200.1 | 5 | nan | Physiological trait | Eating quality | RM305 | RM178 |
| Osa05LNT0313200.1 | 5 | nan | Resistance or Tolerance | Drought tolerance | C43 | RZ70 |
| Osa05LNT0313200.1 | 5 | nan | Resistance or Tolerance | Drought tolerance | C43 | RZ70 |
| Osa05LNT0313200.1 | 5 | APAGE1 | Physiological trait | Eating quality | nan | nan |
| Osa05LNT0313200.1 | 5 | qNBL-5 | Resistance or Tolerance | Blast resistance | RZ649 | RZ225 |
| Osa05LNT0313200.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0313200.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0313200.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0313200.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)