© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0313600.2
CATTCCATCCAAAATATCAGATGACGAGCACATGAAACTTTTACCAGTTACAGGCATTGAATGTTACATACAGCACAAGGAGAAGGTGAAAATGGGGTAGGAAATGTACAATGTTTTTCTCTTGTACAACATACAGCGTGTTTTGACAGTTTTGGGTTGCCTGTTGCTTCCATGAACCAGGAGTAATCTAATCATAGAGGAGCTGCAGCTACAAGAACACAAAGAGAAAAATTGCTGACTAGCAGCTGCTGATACAACTTGGAAAGCTGACAAGCTAAGGCCGTAAGTTCGACGAAGAGTATCACAGATCACTCCCTAAAAGATGTATGATCATGAGAGCTTCGTCAAAGCAAATAAAATGGCAACCTTTGCGTTGGAGATCAAAACCATAAATATGGAAACTCCTGAGATGCTTTACAGATTGGACAGAACCCCACCATAGCGTTGAGAATTAGTGTACACGGACTTGACTGTTATGCTGATGCAGAATCTAGTGTTATCTACTTCTGTGTTTGTTAGAACTACACTACAGATCAACATCTGGCAATGGCATCTTCCAGTAATTCCAGGAATTGTAGTCTTCCTGCTCAACAAGAGTGGTTGGAGGGAACATATCATGGACAAGGGTATGTAAGGAGGTATAGGACTTCACGTCGACAGAACTGTTTATGGCTACTTCCCCCTTTGGGTTGATGATAAAGATTTTCCCTTTTGGAATTCCCATCTTTTTGTAACTAAGCTCATCTGTATCTCTGTTGCCAAATCCAGCATAAAATGGATTGTAATCAGAAGGGAAAAGTGCTTTAATGTCCTCCAGACATGCAATCTTAAACTCATGTGGTGCTCTTCGTATAACTTCCCGGTACAATGACGGAAATAAACCATCAGGTGAAATCACAACAGGTCCATTAGGCAATACCTTCCCATCCTGTTTTAGGTTGAATAGAAAGTTTTTGGTCAGGTATGCCTGAACTATAGCTCTAGCACTGAGGAATAATAGTTGATATCCATTTTCCTTTATTGCAGAAAAAAGACGAGCAACACCAGACTGACTCCAATCTCGTCCAACTAAAGGCATGACCTGGCCCAACACATCAGACCTTGTAATGGTTCCATCCACATCAGAAATGACAATTTTAGCATTCCATTTCCACAAGTAAATATGTGCCTCAACCTGTTGCTTTCCAAGAACTCTGGTGGAGAAGCTAAAAGTTACAATGTTTTGGCCCTCCTTCAGGTTTAGTGATGCCACCTGTTCACTAGTGGGAATTAATGTTCGCACAAATTGCTTTCTTGGTGACTGATTTATATTATTCTCTGGAGTTTGCTCATCCATTGGACTCAAGACAGTTTCTGTGTCAAGAAAAATGTCCTCGGATGAATCACTGTTACTGCGCTGAAGGGATCTTGATATCCTGAATGGTATGTTCCAAAGCCTCCATCTCCTGCTTGAGGGAGACAGCCCAAGAGAATCTCTTGAAGTAGGTGTTTCTTGGTGTTCAACCGGAATAGCATCAATATGTTCTGTGCAGAAGTTCGGACCAAAGACAGCTTTCCCAAGAATAATATGAGAAATTTTACTCCATAAGAAATACTGACTATCAAATTTGACAACAAGGTTTACATTTTTCATAATTGATGATCCTGATAACTTGAAATCTTCCTCAAGAACAAGATGTTGTTGGAAAACTTCTTCAGCTGATGCTTGGCCCATTCCTGGCCGTAGCATGTGCCCACAAAGAGAAATTTCGAACCCCAAGCCCTTTTGTAATTTGGGATGCTCTTCTTTATTTAGTTCCTCTTCAGCTGCTGAGTTCTCTGGAATGCTACCTAATTTGTCTTTGTCACTGGTTCCAATGGTTGAATGTAAACCATCAGGCCTATTCGCCTCATTTTCAGAAGAGGCTGTCTCCTTGGTCTTGCCATGAGAACCTCCTACAATGGACATATCAGATACCTTGCGACAGTGGGCAGAACTATCTTCACCTTCTGTTTTATTATCCTCCTCTAGATACTGTAATGGATCATTTCGATCACAGTGGGTAGTTTTACTTATATCTTCCTCCAGATCTATGTCAACAACAGAACGATTACTCAGACTAAATTCAAAACCCTGCTGATGATCAAATTCAGGAGAAAATGGTTCAGTTCCCGAATCTCCGTCATCTATTTGTGATGAGAGGTCTAAGCAACTTTTAAAAGTATCATATTTACCAAAACTAGGACTAGCAATTTCTAACTCAGTGTCCTCATTGCTGACATCGCAAACCTTGTCTACATTAGCTGGCACCCTGCAAGCCTCGTCATTCTCAAGCAGTGGAACATCACAAGCCTCATTTTCAGTGGCCAAAGGCTGATACCCCTCATCATTGTTCTTGGAGACATCACGAGCCTCATCTTCAGTGGCCAAGGGCCGATATCCCTCATCATCGGTCTTGGAGACATCACAAACCTCATCTTGGCTAGAAGGGGGTCGGCAACCCTCATTTTTGTTCTCTGAGATGTCATGGACCTCATCTACATTGATCAAGGCTTGATAGTCCTCATCATTATTCCCTAACTCTGGGACAACTAGAGATTCGACTTCATTGGTCAATGCACTAGTCACATCTTCATAAACTGAGGTATGGAGCACTTCATCTCCAGTAACAGGGACATGATGTGACTTATCCGTCTCAATTGGTACATCACCAAGTTCTTCCAAAGCCTCTTGTTGATTTCCAGAATCAAACTTAACCTTTTCCTGTGGCATGTATAAATCACCGACAATGCCAGCTTCCCACACCTCACCACTGCGGCTGAAATCACCACTTGAGCTCTCCCCAGGTCCCAAGTGGAATTGGGGTTCACTTAGCTGCACATCCTCCACATTCTCCTCGGTCGAGGAAATGGGGGCGGTGAGGACATGCCCATCCACACTAACCAAAACCATCTCTGAATTGCTCCCATCAGGTTGCTTTGCCGAATCTTCCGCTACCTCCATCCTGCTATAACCGTATGAATCAAACTCCTCTATAGCTTGCTTCTCTTGACACTCTACATTCGACTCCGGGCTACCTGGTCTGCCTTTCGCTCCGATGTAAAGATCCCCGTCGCTCTTACTCCGCGCCGGAGGTTCAGGCTCACAGCTAGCTTCCTCTTCCTCCGAACTTGTCCCAGAATTTTCACTGCCAGGCACAAGCTCCCGCATGAAGTAGGCTTGCCCAGAGTTGTCGAGCTGCATGTGGAAGCTGGCGTCCACGCCATTGACGGTGATGGTGACCACCTTCTCCGCGCCCTTGAGAACGCCCTGGAACTTGCCGAACCGGACGTACCAGGGCGTGCTCCTGTACGAGCCGTCAGGCTGCTCGACCGCGATGATGTCGACCGCGCCGCCGAACGGGTGGAACGGCGTCGCGACGGAGTACACCCCCTGCGAGATCAGCGACCCTACCCGCCCAACCACGTTCATCTCCGCCGCGAGGATCCTTCGATCACCGCGCCAACGTCGGGCATGGGGGTTCACCTAGAACCCCCGATTTCTCTCCAAACAAACTGCAAAAAATCAGCAGCGCACCACGCATCAAAAATTTTTAAAAAATTCCAGAACAAGGAAAACCAAACCAATCCAATCCAATCCAAGCCGGAGGGGTCTCCAGTCCACGCCACGCCGGGCACGTGAAGCGGCGGAGGGAGACGAGGGCGGGATACGGGAGGGGAATGGATGATACCTCGAATTCGATTCGAGTGGAGACGGAAGCCGACCACCGGCTGGTCGGCCGCGCGCGCGCGCGCGGGGGCCGGGAGGGAGTGAGAAGGCTAGGGCGCGGTGGCGACGGGAGATGGGGGAGGCCGTCCACGCCGTGCCTGCCTCGCCGCCGGCGGAGCGCCTCCGGCTCTGCAGATCGGGGGAAGCAAAGCAACGAGAGGGGAGGCAGCGACGACGGAGAGAGAGGAGGGAGGAGGAGAAGAAGAGAAGCGAGGAGGCAGAAGGGCATTTGCGTCATTCCACATTTTCTCGCCGTTTTTAAAACATAATTCGAAATTGAAATTCTACACGCCATTGGGAATTCCATCTCCCTTCTCCCACCAAGGTTTCGTGAAGGAAATATCCGCGAAAATTCTGGCAAAATTTCCTTCGACGAGAAGCCACGCGACGCGAACATGGGGAAGGTCGTTTCCGGAAGCTTCTGGAACCTTCCATGTCGAGGTTGGAATTGGGGATGGACAGGTGGCCGTTGGATGGGAGGCATCGCGTGGGGCACACATGCGATCCACACCCTCGCGAACCGCCTGCACCGCACGCTCGTGTCACTGGCACGTGGGCCACGATGTCCTCCGGGACCACGTGCCATAGACTGGGGCTCGTGATGCTATAGGTGGCCGTAGAGATTTCTGGCGACGTATAACACGCCAAAATGTTCTGGTGATGGGACAGATTAACCAAAGTAGGCTTAAAAAAATTCGGGTCACGTGAGCCTGGCATCGTGCGCCCCACAAGATTTGTGCGATGGGGTGTCCACGTGTAAAAACTTTAGTACTGACAAGATAATGTTGTTTTTTTATTTTTGTAAACTGCCTTTTGGAGCATTAGTATACTAGTATAACGAAATACAACGTTGCTGTGAATAAAACGTAGCTTAATTATTCGGATTTGCTAGAAATATGGCGCCATATACTACAGTCGATTTTTTTTCAGCCACTTACAGAGTAGTTACACCTCATTTACAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0313600.2 | 5 | 22707358 | G | A |
| Osa05LNT0313600.2 | 5 | 22708071 | T | C |
| Osa05LNT0313600.2 | 5 | 22708158 | A | G |
| Osa05LNT0313600.2 | 5 | 22708225 | A | G |
| Osa05LNT0313600.2 | 5 | 22709789 | T | C |
| Osa05LNT0313600.2 | 5 | 22710042 | C | A |
| Osa05LNT0313600.2 | 5 | 22712685 | G | C |
| Osa05LNT0313600.2 | 5 | 22712861 | A | G |
| Osa05LNT0313600.2 | 5 | 22713013 | G | C |
| Osa05LNT0313600.2 | 5 | 22713615 | T | C |
| Osa05LNT0313600.2 | 5 | 22714625 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0313600.2 | osa-miR5533 | Cleavage | 4.5 | 15.008 | 1 | 21 |
| Osa05LNT0313600.2 | osa-miR5544 | Translation | 5.0 | 11.926 | 1 | 22 |
| Osa05LNT0313600.2 | osa-miR5830 | Cleavage | 4.5 | 9.559 | 1 | 24 |
| Osa05LNT0313600.2 | osa-miR5830 | Cleavage | 5.0 | 12.272 | 1 | 24 |
| Osa05LNT0313600.2 | osa-miR2873c | Cleavage | 5.0 | 19.554 | 1 | 21 |
| Osa05LNT0313600.2 | osa-miR6248 | Cleavage | 4.5 | 10.825 | 1 | 21 |
| Osa05LNT0313600.2 | osa-miR5512b | Translation | 5.0 | 20.147 | 1 | 21 |
| Osa05LNT0313600.2 | osa-miR6251 | Translation | 4.0 | 9.559 | 1 | 21 |
| Osa05LNT0313600.2 | osa-miR156c-3p | Cleavage | 4.0 | 22.569 | 1 | 22 |
| Osa05LNT0313600.2 | osa-miR156f-3p | Cleavage | 4.5 | 22.569 | 1 | 22 |
| Osa05LNT0313600.2 | osa-miR156f-3p | Cleavage | 5.0 | 20.241 | 1 | 22 |
| Osa05LNT0313600.2 | osa-miR156g-3p | Cleavage | 4.0 | 22.569 | 1 | 22 |
| Osa05LNT0313600.2 | osa-miR156h-3p | Cleavage | 4.5 | 22.569 | 1 | 22 |
| Osa05LNT0313600.2 | osa-miR156h-3p | Cleavage | 5.0 | 20.241 | 1 | 22 |
| Osa05LNT0313600.2 | osa-miR166c-5p | Translation | 5.0 | 13.435 | 1 | 20 |
| Osa05LNT0313600.2 | osa-miR156l-3p | Cleavage | 4.5 | 22.569 | 1 | 22 |
| Osa05LNT0313600.2 | osa-miR156l-3p | Cleavage | 5.0 | 20.241 | 1 | 22 |
| Osa05LNT0313600.2 | osa-miR810b.1 | Translation | 5.0 | 19.39 | 1 | 21 |
| Osa05LNT0313600.2 | osa-miR1850.3 | Cleavage | 5.0 | 14.482 | 1 | 22 |
| Osa05LNT0313600.2 | osa-miR1866-5p | Cleavage | 5.0 | 21.303 | 1 | 24 |
| Osa05LNT0313600.2 | osa-miR2096-3p | Cleavage | 4.5 | 9.89 | 1 | 21 |
| Osa05LNT0313600.2 | osa-miR2101-5p | Translation | 4.5 | 11.69 | 1 | 22 |
| Osa05LNT0313600.2 | osa-miR2105 | Translation | 3.5 | 15.332 | 1 | 20 |
| Osa05LNT0313600.2 | osa-miR2867-3p | Cleavage | 5.0 | 17.39 | 1 | 20 |
| Osa05LNT0313600.2 | osa-miR2905 | Translation | 4.5 | 12.512 | 1 | 21 |
| Osa05LNT0313600.2 | osa-miR2923 | Cleavage | 5.0 | 12.953 | 1 | 22 |
| Osa05LNT0313600.2 | osa-miR2928 | Cleavage | 3.5 | 9.566 | 1 | 20 |
| Osa05LNT0313600.2 | osa-miR3979-3p | Cleavage | 4.0 | 14.503 | 1 | 20 |
| Osa05LNT0313600.2 | osa-miR5512a | Translation | 5.0 | 20.147 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0313600.2 | 5 | nan | Resistance or Tolerance | Drought tolerance | C43 | RZ70 |
| Osa05LNT0313600.2 | 5 | nan | Resistance or Tolerance | Drought tolerance | C43 | RZ70 |
| Osa05LNT0313600.2 | 5 | APAGE1 | Physiological trait | Eating quality | nan | nan |
| Osa05LNT0313600.2 | 5 | nan | Physiological trait | Eating quality | RM305 | RM178 |
| Osa05LNT0313600.2 | 5 | qNBL-5 | Resistance or Tolerance | Blast resistance | RZ649 | RZ225 |
| Osa05LNT0313600.2 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0313600.2 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0313600.2 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0313600.2 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Osa05LNT0313600.2 | 5 | nan | Physiological trait | Eating quality | RM305 | RM178 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)