© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0314000.1
GATAGTAATAGTATTGAAGATTTTCACCAGCCACGTATATTTACACCAAAAGAGAAGGTTTGCATCAACAGCAGCGAGCTAAGCTGAGAGTCGCCATGTTCGCGACTACTTGAGCACACCTACAGGCAACTACCACTATGTACAGAGAAGGAAGGGCATGCGCCACCTCAGTTTTTTCCCTTTCCTAACATCAGCTCCACCCGAATCATATGTCTTGGTAAGTTAAGCAGTGAACCACCCACATTTACACCATGTTTTCCTACGTGATACTTACAAAACACACATTTCTACTGCGTGTGATGGCATGCGCAGCTAGATGCTATCAGTTTCAAGTCAAGATAAGTGGAAGGACCCCTGACCTTCCGTAATCGCGTAGAGTAGTTTCTCCCTCATCTTGTCCTTGGAAGAATAGGGGGGTAACTTTAGATAATTAGCACAAGTCATCACACTCGGAAGGTCATCATCAGCCTCGTTGCTGTTATGCTGCTTTCGGACAACCGTCAACTTCGGATTTAGCGCAGCTAACCCACCCGGTGGGAGTCGAGGTGAACCTGTTATAAATTGCAAGAAAGCTCTGCGTTGATGGCCTTCAAACTCCTGTATAACCTCCAACAAATTAATGACAGGAGGGCTGCTGGAAGTGTAGCCATGATCAAACTTTATATGATCCACAAGTTTCGCAAAATCCCACGTATCTTGTTCACCGCAGAGTAATCGCTCCAGCTCATCCTCTGAGAAGACCTGGAGCATGCTTAATGGAAATACCTCATTGAATCCTGACTTAAAAGCTTCCAGCTGTCTTGCAATTCCACTTCTAATTGTTGCATCAACAACAAAAGAAACATACTGTTCTAAATTGTCAGCACTTACATTATCCAAGCTATTTTCTAAAGAAAGAACATATTCTGGATATCCTGGAAGAGCGAACTCAATAGCAAGATCCTCAATCCTGCAACCTCGATAAGACAAATCAGATGTACTCTTGCAGTCCCCACTTGAACTTGATTCTAAATATTTTCTCCGAGCAGCAAGTGCTTTAAACTCCATAAGGGTCATTGCTAGTTCAGGATCAAATGAGTGAATGTCATATATATTAAGTTCCTAAGAAAGAAAAAGGTTATTTAGAGACTTGGAAAGTATGAAAGCATAGCAAACTTCATCCAGGGATTCAGTCCAAAATACCTGTCCTAGTATAAGCCTGTAAAATGCTTTAGAAAATGGAATGTCGAGAATTCTGTTGTCTTTAACTGCCTTTGCAACGACCTGACCAAGGAGGTGGAACTGTTTATTCACTTCTGAGAAGGAAGAACAATCCACATGGGTGGACCATGGTTTAGGAAAAAGTCCATTAGGGGCAACCACAAATACAGAACCACCATGAACATTATCCAGGCCAGCTTCGCCGGAGAGCTCCCCTCTCCACATGCCTAAACCAGACTTCTGAAACTCATGACTTATCAATGTATAGAATTCCATCGTAGGACCCAAGCCTGTGCCTACTTCCTCTTCATATTCTACTTCAAGCATTGCATTACTCCGAGCATGTGATTGCATCACTTTAGCAGCAGAAACAAGTATATTGTCGCGATCAACTTTGAACTTTTTCCGTGAGAAGGAAGGCACCCTTTCTGTCATTACACCACTGCCACTTGTATCCATCATATTCCCATGTTGTGGGGTCAAAGAACCAAATGCTGTCAGCTGGAAATACTTCCATCTTGCCTCAAAAGAAAACAAGAAGGGACATGCAGACATCAGTTCAGTGCACCATAAAGGCAGGCAACGAGACCTTAAAACCAAGGGATCATGCATCTGTTGCTCCAGTTTATCTGTCAATTTAGCACTGACAAACTCCTGCTGTGGAACTACAGAAACATCAACTTTCAGATCATCAAGGTCAGTTATGCTTCCATGTACAAAAGCACGGTTTCTCTCATCAGAGACGAGGTGAAAAGAGTATCGGTTCAACCCCTCTAGAACTTTTAGCATAAACAATATGTCATATGATGGACTTGATCTGTCAAGTTTGCAAGGAAGTTTGCCAAGCAACAGGCTAGTGAAGAAAGGGAGCGTCTGACAAATATATCCAGCTTTATCGGGATGTGCTGGTGTTGTTGCACAAGATGAATACTTAAGAGGATCATCAATTTCTGGGTTTGTAGCCGTTCTATATGTTACATCATGCACAATGCGCCAAAACTGGTTGTCCAATATTATGTCAGAACCTGCATTAATCTGATCCTGCAGGATTGATTGATACAGAGTAACAGATTGGTCAAGCTCTTTTCCTTTCAAGCTAAATAACAATTTTGGTTGCGCAGCATGATCACTTGTGTTTGTCTCTTGTTGGCCTGCACCAGATGACGAAGGCCCTTTATTTGAGCCTGGTTCTACAGATGGACTTTGATTTCCTATTATAACACCCTCTGGTGGAGGGGATGATTCGGGTGAGGAATATCTTTCCTGGAGGTCATCTTCAGGATATTTGTTTTCAGAAGCAGTACCATTGGCCGATGATTCAGGCTTCTGATTGCTTGTGCCTGTACAAATTTTGGGCCACAAGAACTCTTCAATAGTGTGCAACAAGGAAGAGATCTCCAAATTAACAACATTATCATAGCTCGACAAGTTGGTTTGATCTTCATCCTTCTTAAATCGAACTCGGATACATGGAGTAATCGTTGAGTGCCTAGTAGGGATATCTGAAATATTGTTCCTCGGCTTGAAATTATGGCTCATTATCACTGGGAAGTTGTCAAGAGAAGTAAGAGCATTCTGCAGTTTCCTTACTAACAGTGTCAAGAGCATATCACCCCAGCCCTGCTCCATTCTTGAAAAAGATATCTGAGTAAATGACTGAAACCTTTTTAGCACGGCAAGAAAATGTTCAGTATTGTAATCATTTGGGATTCTCTCCAATTGGAGGTACTTGCCATTGGAGAGATAGTTAGACAAGGATTTGATCAATCCACTCTCAAGAAATTCAAAGGTAGTCATTGTTTCTCCCCCATGAAGCTCCATCATCACCTCACTTAAAATGTCAGTCAAGTGCTCTTCATTTTGTATATTGTCTCGGTTTAATGACTTATCAGCAGAATCGTTCAGAACTGCGCAGCAAGTTTTGAGCTTTTGCAAAATCTCTGTCAAACCCATCTCAGAGTTCACTGCTTCGGTAGTGAAATAGGTTGTCTTCACATGCCTTGCGAAAGTAAAAAGGTTGCCCTTTCCAATCATGCAAGTCCTTGTTTCAGCAGCATCAGATCTGGGATAATCAAATGCATAGCAGAAACATGTAGGCTTATTTCTTATGATAGGCTGATTCTCTGATTGTTGTGCTTCATCTGAGAGATTAGTAGACTTTGAACAATCTTCTTGCATAAGAAGAGCCTCAACTGCATAGACAACACCTTCCTTGATAAAGGATCCAAGGTAAGCATCAGGAAGCTTTTGCATGAGAATTTCGATAAGCTTTAGTGATGAGAATAGCACATGATGATCCTTCCGAGACAATAAACCAGCCAAGAAACTTGGTATGTTCGCATCCTTGAGCAACTCTTGAAGCATTTCAGGTTTACTGAAATAACAGATGTTTTTTACAATTGAAGCACATCCATAGCAAATGTATGAATTTGCACCAGAGTTGACTGCCTTGATCAAGACAGGAAGAATCTCCATAGAGAACTGACACAAAAACCTTGGTTCATCTACAATTATTTTTTCTTTTGCAAGTACCATCTGGGTATCTTCAACATCTCTTGCTGCAGAAGGAATAAGTTGGTTTGCTAATTTCAAAGCTTCATTGACCTGGTTGCTTTGGTTTTCCAAAGGCAGGTAAGGCATGCCATGTGAGAGATCTGAAGTAACCAGAATTCTGCTTATGGTGTTACCAACATTCAGCTCAAAGAGAGACTTCACAGCCACAAGTGAATTGCAGGCTAGCTTGGCGAGAAGCCCAATCAAGTTACTGCATGTTGATGGGCTAAGAGAAGTTAGCCCGCCAGTATTGATCAGAGGCAGGACTTTCTCTATCACACCCTGGTGACAGAACATGTCGAGAAGCTCCACTGAACTACTAAATGAATCCACGATGTTTATCAAGCAACTTGCAACCTTCTCCACTACCATCTTGTCCTCAGACTGCAGTAGATTACACAACACTGGCACAGAATCCATCACAAATTGGGAGCAATCTTTGGGGACCTTCTTACAGGCATTCGCAGCAGCTGAGACCGCAACCCTCTGGATACTTGCAGAGAAGAAGTCAATGTACGTGAGCACAGCAGTGATCATGCCAGCCTGCAAGCACGGCGTCGGCTGCCTCTGCGATATCTTCTCGAATGCTTGCAAGCACTGCGCGTGACACGATCGCATACAACACGTCAGGCCAATGTGATCGTTCGATCGGGTCGTCAGAGCCGCTCGGTTACCTGCTCAGCGACATCAAGGTACTCGATGGCGAGGAGACGGGAGCAGAGCAGGGGGAGCAGGCCGTGGCGGACGACGGCGTCGGCGGCGCGCGGCATCGCGTCGCAGAGGTACGTGATGGCGCGCACGGAGAGCAGCATCACGTCGGGGCTCGCCGCCGCCGCCGGCGCGCCATCGGCGCCGCCCCCGACCAGCCGCACCAGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0314000.1 | 5 | 22783764 | T | A |
| Osa05LNT0314000.1 | 5 | 22776366 | T | G |
| Osa05LNT0314000.1 | 5 | 22776435 | T | C |
| Osa05LNT0314000.1 | 5 | 22777055 | T | C |
| Osa05LNT0314000.1 | 5 | 22777106 | G | A |
| Osa05LNT0314000.1 | 5 | 22779528 | A | G |
| Osa05LNT0314000.1 | 5 | 22779878 | T | C |
| Osa05LNT0314000.1 | 5 | 22781626 | T | C |
| Osa05LNT0314000.1 | 5 | 22781835 | C | T |
| Osa05LNT0314000.1 | 5 | 22781877 | A | G |
| Osa05LNT0314000.1 | 5 | 22782518 | T | C |
| Osa05LNT0314000.1 | 5 | 22783852 | T | C |
| Osa05LNT0314000.1 | 5 | 22780095 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0314000.1 | osa-miR5540 | Translation | 5.0 | 17.918 | 1 | 21 |
| Osa05LNT0314000.1 | osa-miR5834 | Cleavage | 4.0 | 12.99 | 1 | 21 |
| Osa05LNT0314000.1 | osa-miR1437b-5p | Cleavage | 4.5 | 12.347 | 1 | 21 |
| Osa05LNT0314000.1 | osa-miR7693-3p | Cleavage | 5.0 | 15.915 | 1 | 22 |
| Osa05LNT0314000.1 | osa-miR171a | Cleavage | 4.5 | 15.303 | 1 | 21 |
| Osa05LNT0314000.1 | osa-miR396a-3p | Cleavage | 4.5 | 21.642 | 1 | 20 |
| Osa05LNT0314000.1 | osa-miR396b-3p | Cleavage | 4.5 | 21.642 | 1 | 20 |
| Osa05LNT0314000.1 | osa-miR397b | Cleavage | 5.0 | 10.652 | 1 | 21 |
| Osa05LNT0314000.1 | osa-miR167d-3p | Cleavage | 4.0 | 15.695 | 1 | 22 |
| Osa05LNT0314000.1 | osa-miR167h-3p | Translation | 4.0 | 12.035 | 1 | 21 |
| Osa05LNT0314000.1 | osa-miR171b | Cleavage | 4.5 | 15.303 | 1 | 21 |
| Osa05LNT0314000.1 | osa-miR171c-3p | Cleavage | 4.5 | 15.303 | 1 | 21 |
| Osa05LNT0314000.1 | osa-miR171d-3p | Cleavage | 4.5 | 15.303 | 1 | 21 |
| Osa05LNT0314000.1 | osa-miR171e-3p | Cleavage | 4.5 | 15.303 | 1 | 21 |
| Osa05LNT0314000.1 | osa-miR171f-3p | Cleavage | 4.5 | 15.303 | 1 | 21 |
| Osa05LNT0314000.1 | osa-miR1857-5p | Cleavage | 4.0 | 21.725 | 1 | 21 |
| Osa05LNT0314000.1 | osa-miR1866-5p | Cleavage | 3.5 | 7.151 | 1 | 24 |
| Osa05LNT0314000.1 | osa-miR1866-5p | Cleavage | 4.5 | 20.01 | 1 | 24 |
| Osa05LNT0314000.1 | osa-miR1879 | Cleavage | 5.0 | 18.118 | 1 | 24 |
| Osa05LNT0314000.1 | osa-miR1879 | Cleavage | 4.5 | 12.385 | 1 | 24 |
| Osa05LNT0314000.1 | osa-miR827 | Translation | 5.0 | 21.388 | 1 | 21 |
| Osa05LNT0314000.1 | osa-miR2092-5p | Translation | 4.0 | 13.744 | 1 | 21 |
| Osa05LNT0314000.1 | osa-miR2093-5p | Cleavage | 5.0 | 16.375 | 1 | 20 |
| Osa05LNT0314000.1 | osa-miR2863b | Cleavage | 4.0 | 20.768 | 1 | 21 |
| Osa05LNT0314000.1 | osa-miR2863b | Cleavage | 4.5 | 17.276 | 1 | 21 |
| Osa05LNT0314000.1 | osa-miR2926 | Cleavage | 4.0 | 20.487 | 1 | 20 |
| Osa05LNT0314000.1 | osa-miR395x | Cleavage | 4.5 | 10.512 | 1 | 21 |
| Osa05LNT0314000.1 | osa-miR5144-5p | Translation | 3.5 | 14.519 | 1 | 21 |
| Osa05LNT0314000.1 | osa-miR5144-5p | Cleavage | 5.0 | 12.903 | 1 | 21 |
| Osa05LNT0314000.1 | osa-miR5499 | Cleavage | 4.5 | 14.643 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0314000.1 | 5 | nan | Physiological trait | Eating quality | RM305 | RM178 |
| Osa05LNT0314000.1 | 5 | nan | Physiological trait | Eating quality | RM305 | RM178 |
| Osa05LNT0314000.1 | 5 | nan | Resistance or Tolerance | Drought tolerance | C43 | RZ70 |
| Osa05LNT0314000.1 | 5 | nan | Resistance or Tolerance | Drought tolerance | C43 | RZ70 |
| Osa05LNT0314000.1 | 5 | APAGE1 | Physiological trait | Eating quality | nan | nan |
| Osa05LNT0314000.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0314000.1 | 5 | qNBL-5 | Resistance or Tolerance | Blast resistance | RZ649 | RZ225 |
| Osa05LNT0314000.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0314000.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0314000.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)