© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0314100.1
CGAGTACTTTCCATGTACAGTAATCGATTTGCGGGCTTTCGTGGGCCCAGGCGACCAGATCGGCCGGCGGCGAGGGGGACCGCATCGCCGTGCTTCTCCGTCGCCGCCGCACCACTTCGCCGAAGCTGGAGGCGTTGGCCCCCGCGCGGTGGCGCCGGGGGAGGGCGACGGCGGCGGAACGCCGGCGAGAAGCGCGCCGCTGAGCCGTCGATCGAGGCGCCCCCGCGCAGCAGTAAGTACTACGCCCTGTGCGTTGCGGGAGGCGGGAGAACATGGCTGCGGCCGTGGAAGGCACCGGGCGTCGACGTCTGCTGCGCCAACCCCGGCGGCCGCATCCTTCTCCGGCGGGCCGGCGCACCGCGCGCCGCAGGCAGCCGGTTGGTGGGGAAAAGGTATACCGTATACCTGCTGCATGAAATCTCCTTTCCTCTAAGAGCCGAAAAATTCACTAAATTACACTACAGTTCTGAAATCTGTAGCAGCATTTGTACGGTAATGACATCGATGGCACTGACAAACAACATTTCAGATTTTCATCAGCTTATATCAGATTGCATAGTCTCTGAGGCGCACCAATGCTGACATTACAATCTACAAATCACTTTCTGATTTTTGATTTGCACGTTTGGCTGTCGTATGGTGACGGCATCAGGAGAAAGAGCACAATACCTACACTACACTTCACTTATACAACACTAAGTCACTAATCCTAGTACTTATACTGTGAAGTTCGTTTGACCGTCCCAACAAATATTGGAAAGACATCCACTCTTAAATATATATTTTTGTCCAGCAGAACATTCTTCCTAGAATAAATTATCTGAGACTAGCCACTTGGCAGTGGGGGATCCTGAATTGGGTGTCATGAACAAGCCTTGCATGATTTACCATTTGGTCACAGGGACCCCTTTTATGTTCTGATCATGCACATTATTATATTTGAATTTTAGGTGAATATTCCATGCATCTTTTACGTATGGTCTCTCCACTTCCGTTGAATACCGCAACACTTTCTGACCTTATTCTCAAATAAAACTTCATTCAGCCCTGTTTAAGCTTTAATTGGACCAATTGAAATGAAGAATTTCCAATTTCCGACAGAGATCTGTCGAGTGCACAAAGATTGTGTATCCTTATCGTGTCCACAATCAAGAACTAATAATTGTAATTGGTGAAGGGTTAGTAGGCCAGCTCCTAATTTTCTTATCAGAGTCAACATTAGCATCCACAGGCACTTTTGTTCATGCCATGTGTTCTTCCCTCACAATCTCCTTATGATTGATTTGTCCACGGGAGAATTGCCATCACTTCGGTTCTTGCTTCATTTCTTCTCTGGGTAATGGAATAAGGTGTGAGTGAAACACCTCACATGATGCCTTTCTTCTCCCTCCACTTGAGAAAGCAAATTGTTCCTGTAATTTGAAATCGGCCGGCTTGCTGAGTTGCTGACTGTGCTGGTAATTACCGGCAACATGCTTTGCTCCTAGCATTATTGATTATCTTGTTTTATTTTTTTTTTCCACATCACATAAATGAAACAGTGTTGGGAGTTAAATTTACTAGCACAGGAGCCAACTAATCTTGTACCAGGCACATTCATCAGAATTATATATATGCAGGCTTAGGCTACACAAAAGCTTGTACTAAACAGTACTACTAGTTAGACTTGTCATCATAGTGAAGTTAACAAAGTTATCACTTATCAGTGCATCGTACTTGGCATTAGCGGCCGACAGAGAATCCGCCAGCCACACTCCCCACCTCTAGGGGAGGGGAGTGACAGTCAAGTATCCCTTCATTCTCCCTCTACAATGCAGCTCATGCATAGCCTTTTGATGGAAAAGCAGAAATTCCAGAGAGGCAGCAAGAGCATACCATTTTGATTAGCTCACCACTGGCTCTCCTGGTTGCCCTAAAGTAAGAAGTAGTGTAGTACACTTTTGTAGTTTTGTTGCTAATCTATTCGGCTAATTCCTACTATATTGATTTTGGAATCTTGTGTTCTTTGGATTTACTTACCTTTGTATTCCTGCAAGGGTCAAGTGCTCAGGGGCGGATCTACAGTATAAGCGTCAGTGTCAAGCGACACCGATGACTTTCGGCAAAACCTATAACAAAACTGCTTATCCATATACTATAACACTATGTTCTAAGTATAATTAGCATACTATGACACCGACAGACACGTTATGACACCAACAAACTGATTTTCTGGATCCGCCACTGCAAGTGCTGACAGAGTTATTGCAGACTCGCAGTCCGTCTTCAGGTACATCTGAATTGTTTACCCATTACAAACATGCATCAGAGCTTTCGATATTTATTGCATCATGTACTGAAAATTTTCTATACATTAGCGTATGGTACATTCTATGACAAGTTTAAGTTGCTGATACAACAATAGAAGCATTGCAACTTTTCATGGAATCTCATGACTAGTGACAATAAGAAATATCTTAGGACTGTAGGGAGACGAGATAGCCGTATGCTAGTTGCAAGAGGCATCGGTTTCATTCATGCAACATTGGGCCGACTGTAAAAAGCTTACTCATTGCTCTTCTCATCATTGAGTCACAATGCTTGGATTCCCTCTTGACCGATCTTTTGATATCATGGCAACCTCTGGTGCTGCACCTTTGCCAGTTGCAAACAGTTTGGAGGGTAGTTCTTGGTCGTCCATTACTTCACTGAAGATTCCGAAATCCAACAAAATTCAGGCCGTTCTTCAGAAAGAAGCAAGCACTGCAGAGCTGAACTCTGCTTCATTGGGTGCTCTTCATGCCATTTTTAAAATTTCTTTATAGGCTACATATCTAGGACAACTCCTGCTTTATTCTTGATGATACTCATTTGCTGCATTTGAACGGTTTCAGATGGTCAAAAAGGAAGGCTGCTGAAGATTGGCTGCATTTGGGCTCTTAGGAATCGATATGTGCCTGCAGAAAGATCGGTCAAGATTATTCCTCACGGTTAATGCTGCACTGGCTGTTCATTTGGTTAAATTTTGCTTGATAGCAGTAGGATGTTTAGAGCTGCCAGCTTCAGGCTTCCGTAGTGCCGTGTTCAAGAAATCAGTGTGTTGATTCTATGACTGAAATAGTTTGCAAGACATGGATAGTATATAGAGAAAATGTCGCTGCTTTTGCCAATCGCATCATCAAGGCAGCAAAGCTATTCCACTATCTTGATTCTATGACAGTTGAAAGAGATATAAGCATCTACGTAACTTAAACCGTGTTATTCCAGACAGTGTAAGCACCAAGATCTCCGATGGCCAAACCGGCCGTGTGACCGTATTCGTACCAAATAAAAAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0314100.1 | 5 | 22870751 | C | T |
| Osa05LNT0314100.1 | 5 | 22871087 | T | C |
| Osa05LNT0314100.1 | 5 | 22871958 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0314100.1 | osa-miR5788 | Translation | 4.5 | 16.366 | 1 | 21 |
| Osa05LNT0314100.1 | osa-miR2873c | Translation | 4.0 | 20.468 | 1 | 21 |
| Osa05LNT0314100.1 | osa-miR171i-5p | Translation | 4.5 | 17.52 | 1 | 21 |
| Osa05LNT0314100.1 | osa-miR2101-3p | Cleavage | 4.0 | 17.473 | 1 | 22 |
| Osa05LNT0314100.1 | osa-miR2878-5p | Translation | 5.0 | 13.756 | 1 | 24 |
| Osa05LNT0314100.1 | osa-miR2923 | Cleavage | 5.0 | 11.539 | 1 | 22 |
| Osa05LNT0314100.1 | osa-miR5502 | Cleavage | 3.5 | 13.517 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0314100.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0314100.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0314100.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Osa05LNT0314100.1 | 5 | nan | Physiological trait | Eating quality | RM305 | RM178 |
| Osa05LNT0314100.1 | 5 | nan | Physiological trait | Eating quality | RM305 | RM178 |
| Osa05LNT0314100.1 | 5 | nan | Resistance or Tolerance | Drought tolerance | C43 | RZ70 |
| Osa05LNT0314100.1 | 5 | nan | Resistance or Tolerance | Drought tolerance | C43 | RZ70 |
| Osa05LNT0314100.1 | 5 | APAGE1 | Physiological trait | Eating quality | nan | nan |
| Osa05LNT0314100.1 | 5 | qNBL-5 | Resistance or Tolerance | Blast resistance | RZ649 | RZ225 |
| Osa05LNT0314100.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)