© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0314400.1
GCCCAGGAAAACGAAATGCTCTAGAGCAAAATAGCAGTTCTTGCAGTCATTTGTTCTACATCTCTCCCGTGTTATAGTAACCCATCGTAGAAAACGTGACCTCCAGGCAAGCTCTAGGCAGATTCTTATGCCCCGACTTCTTCTCTGCCAACTGAAACCAAAACGGTTTCTTACAGCTTCCATGCTTTAATACAGGCACAGCAATATTGCCATCAAAATGAGACGAACCATACGTGCCAAATGCTTTGATATGTAACAACTCGTCTAAAGGAACAATTACAACGGCTGTAAACTTGGTATGCTGTCCAACACGGTCCTTGTAAAGCGTCATGGAATCCTCGCCTGAAAATGCTACAAGCAAAATATCATAAGCTTCAGATGTGCTGCCCAGATCAATATCGATAGTGGCCTCAATCCCATTCTTTAAGAAGATATAACGCATATCAAGTGGACCGAACGGGCCATCAATTCTTGATATCAACTTTTTGTCATGCTCAATGGTCTCATAGTCGAACTCCATACAGGCGTTAATGAGTATGTCATCATCTGAACTACTATCACTGTCACTGCCCTTAACCTTCAAGTGAAACTCGATTAAAGCACTGTCCCATACGGAGATGCCACGCATGGGGGGACTAATCTCCAATGAAGGCGAATCCAGGTTCAATTGACAAGCCTTCTCCCTGCTGACATTGAAGATATAGTTCCTCAATGGCTCTTTATCATCCCTCACAGCCACAAAACCATAAACATGCATGGACCGGCCATGTGGGAAATCTCCAGTAAACACTAGTCCATTGATCCGCAGCATAGTTGATGCAACATACTTGTCTTCATGTGCAAAGCGCTTACACCCCCAAGTGGTTGGAGAAGTGTCATTCAAGCGATAGTCAACGTAAAACCCAATCTTGGAAAAACGCAAGTCCTCAAGGTCCCGTGGCCAGATGCAGGCAGGGAAGAAATGCTGATCCAGAGGGAGAGTGGCATTCAACTCTACAATCTTTCTCATACAGTCTTCAGAGTAATTGATAATCTTCATTGCCATCTTTATACTGCGTTCTGAAAGTAGAAGTAAGCTCAGACCATTGGCAAATAAAATCTAACTGTACACAATGCCCGTAGCTCAAATAATATCACAAGTTGCGAACTTGCGACATGGGTCCAGCAAAGCAATTTAGGAAGCAGACTACATTGTTTTACAGTTAAAAAAAATCAGAGAAACTACCGTAATTCTTCTACCTCAGAGAAGCTACCCTAATTCTTCTACCCCATATCTCATTCTTTGTACAATGGCACCCCCATAAGTGAATAAACTTCCCCAAATAAGACTTCATAAGTGAATAAACTTCCCCAAATAAGACTTCATTATTTGCTTGCTCTTCTTTTCTTGTACAATAAAATCAATCATGTGCTTACTCCGTAAAGCTTTCTCTGAATCTTTCTTGGAATTGTCCAACGACGACTGAGCGACTGTGGGGGGATTTGGAGTCCTCTCCGATGAGGCCTGACCCTCTTCCATCCGCCTCGTCGCCGCACAAGGACAGCCACATCCTCCGGGGGCGGAAGTGCGGTGCGCGGCGAAGTGGGTGACCTTGATCAACGGGAGGAGGCGGTCTAGCTCGTCGTCATCTAGGTCTGCGAGGCGACGAGAATCGGTCGCCGCCATGAGGCCTCGGAGTGGATCGGAATCGGGTGGAGGAGCAATCGAGGAGGACGAGAGATGAGTAGCTCGGTTAGGGTTTCACTGGTCCCGCGCCTCGTCTCTCTAGAATCTCGATGTTTACGGTCGGGAAGACGAAGGAGACCGGCTATTCTTTTTTTTTTTAAGGAAATTTTTTTTCTTCAACTTTTGCTTTTCTCCTTTTTTTAAAAAAAAATCTCCAACTTGGAAAGGTTTGTAGTCTGAGATAAATTACTGTAGATGGGCTACAGGCCCAACAGTTAACTATAAAGGTTTCATTAGGCCCTTCGATTTTGTCACCTGAGAAAGCACTATAGACCCGTTCAGTTTGAAAACAGTCAATCCACGACGCAGAATCCTCGTCATTGTTCTGGACTTCAAGATTTTTTATCCCAGCACCACCTTTTTTCCTTCGGAGAACAAACAATGTCCCACGCAATTTTGCAGTTGTCACCATGGCAGTGTTCATCCCCTGTCCAGAAGAAAGCTCTTCGGCATTTGTCAATGGCGGCAACACACCCTTAGGGAGAAGGATGGCTCCCATCATATAGGAAGGGAGGGCGGAGAGCACCGAATTGATGAGAGTGAGCCGTCCATCAGAAGACAGAAGGTGACCGCGCCAACCGGCAAGACGTTCGTCAATCCTAGCGATGAGCGGTTGGAAGTCCGCGAGGCATAGCTTGGTAACAGAGAGAGGGAGGCCTAAATAAGGTTGGGGGAAGGAAGCTATCGGGCAACCGAGAGTCCCAGCCAGCCGAACCGCCTCATCATGCAGGACATTGATAGGGAGGAAGGTGCTCTTGTGAAAATTAATTTTTAGCCCAGTGGCCTCGGAGAAGGAATCAAGGATGGCTTTGAGCACCACAAGTTGTTCTTGCTCTGCCGGCAAGATGACGAGTCCAGCAAAGCAATCTAGGAAGCAGACTACATTTGTTTACAGAAAAAAAAACAGACAAACAATCGTAATTCTTCTACCCCATATCTCATTCTTTGTACAATGGCACCCCCATAAGTTTTTTTTTATGCTGGAAGGTAGATATACTCTACCTTATAACCATTTTATTAATGATGGGTCGGGTAATACATGCCACCCCCATAAGTGAGTAAATTAACTTCCCACAATTATTGGCTTTATTATTTGCTTGCTTTTCTTTTCTTGTATGATAAAATCATGTACTTACTGCGTAAAGCTTTCTCGGAGTCTTTCTTGGAATTGTCCAAAGGCGACTGAGCGATTGTGGGGGGGATTTGGAGTCCTCTCCGACGAGGCCTGAGACTCCTCCATCCGCCTCGGCGCCGCACAAGGACAACCACATCCTCTGGGGGCAGAAGTGCGGTGCGCGGCGAAGGGGGTGACCTTGATCAACGGGAGGAGGCGGTCCAGCTCGTCGACATCTAGGTCTGCAAGGCGACGAGAATCGGTCGCCGCCATGAGGCCTCGGAGTGGATCGGAATCAGGGGAGGAGCAATCGAGGAGGACGATTGATGAGTATAAGTCAGTTAGGGTTTACGGACGGGAA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0314400.1 | 5 | 22955649 | C | T |
| Osa05LNT0314400.1 | 5 | 22956792 | T | A |
| Osa05LNT0314400.1 | 5 | 22957137 | A | G |
| Osa05LNT0314400.1 | 5 | 22957322 | C | G |
| Osa05LNT0314400.1 | 5 | 22959405 | A | T |
| Osa05LNT0314400.1 | 5 | 22959843 | A | C |
| Osa05LNT0314400.1 | 5 | 22959970 | T | C |
| Osa05LNT0314400.1 | 5 | 22960114 | A | G |
| Osa05LNT0314400.1 | 5 | 22960225 | A | C |
| Osa05LNT0314400.1 | 5 | 22960462 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0314400.1 | osa-miR5530 | Translation | 4.5 | 23.2 | 1 | 21 |
| Osa05LNT0314400.1 | osa-miR5539a | Translation | 4.5 | 20.084 | 1 | 22 |
| Osa05LNT0314400.1 | osa-miR5539b | Translation | 4.5 | 20.084 | 1 | 22 |
| Osa05LNT0314400.1 | osa-miR408-3p | Cleavage | 4.5 | 21.842 | 1 | 21 |
| Osa05LNT0314400.1 | osa-miR408-3p | Cleavage | 5.0 | 21.929 | 1 | 21 |
| Osa05LNT0314400.1 | osa-miR535-3p | Cleavage | 4.5 | 25.0 | 1 | 21 |
| Osa05LNT0314400.1 | osa-miR820a | Cleavage | 5.0 | 13.105 | 1 | 21 |
| Osa05LNT0314400.1 | osa-miR820b | Cleavage | 5.0 | 13.105 | 1 | 21 |
| Osa05LNT0314400.1 | osa-miR820c | Cleavage | 5.0 | 13.105 | 1 | 21 |
| Osa05LNT0314400.1 | osa-miR1428a-5p | Translation | 5.0 | 17.316 | 1 | 21 |
| Osa05LNT0314400.1 | osa-miR1854-3p | Cleavage | 5.0 | 13.242 | 1 | 22 |
| Osa05LNT0314400.1 | osa-miR5500 | Cleavage | 5.0 | 9.436 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0314400.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0314400.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0314400.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Osa05LNT0314400.1 | 5 | nan | Physiological trait | Eating quality | RM305 | RM178 |
| Osa05LNT0314400.1 | 5 | nan | Physiological trait | Eating quality | RM305 | RM178 |
| Osa05LNT0314400.1 | 5 | nan | Resistance or Tolerance | Drought tolerance | C43 | RZ70 |
| Osa05LNT0314400.1 | 5 | nan | Resistance or Tolerance | Drought tolerance | C43 | RZ70 |
| Osa05LNT0314400.1 | 5 | APAGE1 | Physiological trait | Eating quality | nan | nan |
| Osa05LNT0314400.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0314400.1 | 5 | qNBL-5 | Resistance or Tolerance | Blast resistance | RZ649 | RZ225 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)