© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0315200.1
CATGACGAAAATATTTGTTGTTGTTGTTGTTGTTGTGTTTTTTTTTCTCTACTGTACAAATTGAGCTAGTCACCGCGGTACTGGAGTTTGCCATCCCCAGTGACATTGTGAACTCTACCGTTGATGCCTTGGGTCGTCTCCTGATAGCTGTTTTCTGCCAAGAGTGCTGAATAAATGAACATTAGCAGGACTTGTTTCAAATGAAGGTTTTCTTTAAGAATTTTTCGAGTATTGAAGTTTGATATGAAAATTTTATTTTCCATGACCCTTGGATTGTAGAATGGCTTTCAAAATCCTATGCCTAATGTTTACATTTCCTTTGCGAAGTCTAATGCAAAGTCTCACTGCCTCTCCTCTTCTTTCCACGCTAATATATATTTCCCTTGACATTCCTGAGATTTTCTGTAATTCCTCGGCCATGACATCCAATCCCTTACATCTTCTCAATCATACATTTTTCCATGTTGCAGAACACCTAAATAACTTGAACATTTCATTCTTTATTTAAACTGAACTCCTATATTCAAATCCTAGGAAAAAGTATAATTACTGATGATCTCAAGGGACAGCAAGATTGGTTATATGGAGTGAGATAATGGCCCAAAGCAGGAGGTGCTTTATTTTCACAATTAACATATGGGGTGAGATAATTACGTGTGCTAGGAATTACATGCAACAAAATGACCCAAAAAATTAATAGGCACAATAAACTCTCTACATGCACACAACAGTTTCAGAGCGATCACAAGATGCCTTTCGTCAATGCTCGTTCTTCATCTCTGTCACGCCATTATCGTCCTTGAAGCTCCGGCGAGTTGGGGTCGTCGTCTCTGCTGCACCAAGATCGTCATTGGAGCTCCGGCGTGCAGGCGTCGTCGCCGTCTCCGGCGAACCAATGTCTTGCTTGGTCGTCGGCGTCTCTGGCGCATCATCGGCATCTTCTTTTATGCTCCGTCGAGTGGGCGGCGTATCTGGCTCGTCGACGTCGGCTTCCTTCAAGCTCCGGCGAGTGGGTGGCGTCTCTGGCGGCGCATCAACGTCGGCTTTTTCCTTCAGGCTCCGGCGAGTGGGCGGCGTCTCCGGCTCATCGACGTTTTCTTCCTTCAAGCTCCGGCGCATGGTGGGCGACTCGGCGGCGCGGCTGTTCGACCTCGACATCCCCATCCTGCCGGCGTGGCCCAACGGCGACTGCGGCGGCGTGCCCAGGCCGCCGCCGGCCCACAAGCCGTGCGCCGCCTCGTGCGCCCGGAGATGACACCCGTACTGCTGATGGTCGTCGTCTCCCTCCTCGCCGTCGCCGTCGCCGGCCATGTCCTCGTCGTCGAGGTCGACCACGTCCTGCATGTTGAGCTGGTGGAACTCGACGATCTCCCGGAGGAACCGGTTCTCCCTGGCGTACACCGTGTTCTCGTTCGCCAGCCGCGCCTTCTCCGCCAGCAGCGTCTCCAGCTGCTGCCGTATCAGGTCCTCGTCGGCGTCGTGCTTGCCGTCCCGGAGCATGCGGTTCTCCTCCTCCAGCTGCGCGCACCGCTCCCTGGAGAAGGCCATGTCGGCCTTCACTGTCTTCAGCTCCCGCTGCAGCAGCTTCACCTTGGCCGCCATGGCGCTCGCCACGTCGCGAGAAGCCTTGATCTGCGGCGACTCCGTGTCCGACATCGTCGGCGACATGGCCTCCGGGCTGGACAATCCCATGCTGCTGTTGCGGAGGTCCATGCTGCAAGCCTTCCTCCTGATGTGCAGCTTCCGGCCATGGACGCCGTCGCCCGTCCTGCTGCTACCCTCCACCTTCGTCAGGCCCTCCTCGAGGGCGGTCTTGATCTTGCATCCAATGTCCAAGGGAGGGTTCTCGGGCTTCCGGACCCGGTCGTAGGACCAACGAGATTGCGATGTCACAGAGTGATTATCATCCGTGCCGCCGTTTTCGTCGAGCATCACTATGGCTTGCTGTGCCAACACTCCCCAGAATCCGTGCTTCGTCTCATTTCCCTTCGCGCCGCGCGCCGATGTGTACAGCTGAGTGACAGGATCCGGGGTGGAGCCGTCGGGCTGGGGAGACGAGGAGGCGGCGGCGAGGGAGCGGTCGGGGCGGCGGCTGTCGTCGGCGAACCGGGTGGCGCGCGGCGACGCGATGGCCGGCGAGGAGGTGTCCCCCGGCTGCGGCGGCTGCTGGCGGTGGTCCTCCACGAAGGTGGCCGACCTCTGGATCCCATGCTTCCTCCGGTACGCCATGGCCGGCGGGCCGGGGGACGGGGGAACTCGAGCGATCGACGGGGCGCTTTGCCCGCTCTCGGCTTCGCCGTCCTTGGATTGGCGTCCTCCTCCTCCTCCTGCCTTAGGTCAGGTGGCGCGCGCTCCTCCCATGGCCGCCTTCCGTCTCCGCGCCACCGCGCGCAAGCAGTGGATGGCATGGCATTCCCATGGCCGTTGCTTCGCCCGCGTTTTGAGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0315200.1 | 5 | 23688973 | A | G |
| Osa05LNT0315200.1 | 5 | 23689157 | A | G |
| Osa05LNT0315200.1 | 5 | 23689435 | T | C |
| Osa05LNT0315200.1 | 5 | 23689569 | G | T |
| Osa05LNT0315200.1 | 5 | 23689581 | A | C |
| Osa05LNT0315200.1 | 5 | 23689673 | T | C |
| Osa05LNT0315200.1 | 5 | 23690058 | T | G |
| Osa05LNT0315200.1 | 5 | 23691036 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0315200.1 | osa-miR5534a | Cleavage | 4.5 | 8.287 | 1 | 21 |
| Osa05LNT0315200.1 | osa-miR5534b | Cleavage | 4.5 | 8.287 | 1 | 21 |
| Osa05LNT0315200.1 | osa-miR5792 | Cleavage | 4.5 | 19.349 | 1 | 24 |
| Osa05LNT0315200.1 | osa-miR1437b-3p | Cleavage | 5.0 | 20.764 | 1 | 24 |
| Osa05LNT0315200.1 | osa-miR166i-3p | Cleavage | 5.0 | 13.29 | 1 | 21 |
| Osa05LNT0315200.1 | osa-miR408-5p | Cleavage | 4.0 | 14.515 | 1 | 21 |
| Osa05LNT0315200.1 | osa-miR1435 | Translation | 4.5 | 14.717 | 1 | 20 |
| Osa05LNT0315200.1 | osa-miR1869 | Translation | 3.5 | 15.518 | 1 | 24 |
| Osa05LNT0315200.1 | osa-miR2275d | Translation | 5.0 | 16.346 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0315200.1 | 5 | nan | Physiological trait | Eating quality | RM305 | RM178 |
| Osa05LNT0315200.1 | 5 | nan | Physiological trait | Eating quality | RM305 | RM178 |
| Osa05LNT0315200.1 | 5 | nan | Resistance or Tolerance | Drought tolerance | C43 | RZ70 |
| Osa05LNT0315200.1 | 5 | nan | Resistance or Tolerance | Drought tolerance | C43 | RZ70 |
| Osa05LNT0315200.1 | 5 | APAGE1 | Physiological trait | Eating quality | nan | nan |
| Osa05LNT0315200.1 | 5 | qNBL-5 | Resistance or Tolerance | Blast resistance | RZ649 | RZ225 |
| Osa05LNT0315200.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0315200.1 | 5 | QFla5 | Morphological trait | Culm/leaf | RG470 | RG346 |
| Osa05LNT0315200.1 | 5 | Eui | Morphological trait | Dwarf | nan | nan |
| Osa05LNT0315200.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0315200.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0315200.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Osa05LNT0315200.1 | 5 | qRFC-5 | Physiological trait | Eating quality | RG470 | RG474 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)