© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0315500.1
ACTATCAAAGTCAACGAATTCCAAGCATGGTTTCAACAGAACGGGCACAGAATATATGCAGTATTTTTTTTGGGTTAATGCCCCATGATCCTAATCTACTGAATCTACAAGCCCCAAAAGGCTCTCCTAAACTACAACACCCTCACCCATTTTGTGATGCTGGTGTACGAATCAGCATCTGTCCAATCCTCACTGTACATTGATCAATGAACAAATGGAACTACTACTCAACATACCACGGTAGACGACCAGTTTGCAAAAAAAAATCAATTTTACTTCATATCTCAGCAGCATCCTGAAAGATCCTCAGTAGTTTGGGCGGTGCTCACTGAAGCCCCTCTCCTCTCATCAAATTTCCCGCATACAGTGAACTCTCGCTATCGCACAAGGTGGTGCTGTTCGTCGAACATGGACTTCCGGACTCCAGGACTAACAAAATTGCCTTGTTCATGGATTCACATTGCAATCTATCAAGAATGGATCATCCCTTGGCAGGTACCTTCTCCAATATTTCCTGTATCGCCGTATGCCGAGTTCTAACCACGGTTTCATGTTGCCGTTGTAGTGCAATATGCCAGCTTTCTTTATAGCACCATGATTGACTCCATAGTCATGACCAAGACCAGACTGGATCCACTGTGCTTCAATAGGATGGACCAGATTTTGAAAAGCAAGCAGGCCTGCAGGTAACACCGCAGCTCTCCATGACGCTTCAGGGCCATGTTGCAGCTTTTGGAGTACTCGATTACGAACTGCAGTCACATCATGCTCCCTCCATTTATTGAGATCAATAACACTCACTCCAGACATCCAGATACATGAACTAGCATCATATGGGAAGTCAACCAAGTATGGTCTGAGATGCCTTAATCTAACTCGACAAGACTGTACAGCACCAATCACTTTTCCTTTCAAATCAAGATTCCATATGTGTGACAAGTCTCTCTGGACTATAGTATCATCTTCCAAAACAATCACCCGTTTAAGATTGCTAAACAGCTCAGGAAGCAAGAAAAGAGAGTGTCCAAACACTGAAATATATTCAGTTCTCATTTGGGTATTTGGAATTCGGGCATTGCTATGGGAAGCGATGCGGAACTCCTCATATGGTGATAAGTGTTCAACTCTCCTATTATCCAAATGTGTTGCTTGGAAATCTTCAAAATTCAGAACACCGATAGTGGCTTCCTTGTAAGAATTTCTAATGAACCAATTCTTAAATGCATAAAAGTTCTGTGCATCAGTAACAAGATGAAAAACCACATTTGCTGATTCCTCAGAATTTATCACAGTCGAGTTGACAGTCATGGAAGATGCAAGAAGGTTGGTAGAGAAAATAACATAGTGCCGGAGAACTGGATTTTCAAGCTTTTGCACATTGGAGTACTCCATGTCAGCAAAGGATTTAAAGTAGTCTACTGTCAATCTCATTGAAAGGCAGTGGAGGCTCTTAGGTAATGTCTGAACTCCAAGCCGGTAAAGATATGCACCTTGTCTTGCATGAAAATGAGCTTCATCCTCAGTCATATCAAGCAATTGCCTCAGTTTTTTCTCAAAATTAGTGCATTCTATCAGACATGATTTTGCTGCAGCTATTGTCTTCTCCATCTTTGCCATATTGGCTCCATGGAATGCAGGAAGATCAGCATCACATATGGCTTCGCTGAGCATGTGCTCATGCTCTTGGATACTTTGCTTCATTTCATGTGAAAGTTTTTCCATCCCCTCAAGTTTTGCTATGCTTGGATAGTAAGCTCTTGCAACAAAGAGCTGGTCTTTAAGTCTCTTCACTACAGAATCTTTCATCACTTCCTTGTGTTCAACAGACCAAACACAATAGCTTCCAAATTCTAGTTGGCACGATTTTATACTCTCATCACCAGGTAAACCTTGTTCAAAATTGTCCTTAGGATCAGCATCAGTATTACTCAGTAATGATATATCATCAAAGATCACGATTTGTTTGATAGGAAGGCCTGGATGGATTGAGGTATTGCTAATCGGTTTGTCAATACTTGGTTGATTGTTGGTCCCATTGCTTTCTGCATCAGAATTACCGGTATTTGTTTTGCTCCAGTCCTTTTCAATCGATGGCGGAAATTTGTTCGTGTCGTTGACTGGCAGCCTGTCATTTTCCTGCGATGTATTTGGCTCCCAACCACCACCCTCGCTGCCGCCAAACACCGACACGGCGCTCTCGTCGGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0315500.1 | 5 | 23874613 | T | G |
| Osa05LNT0315500.1 | 5 | 23876748 | A | G |
| Osa05LNT0315500.1 | 5 | 23875805 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0315500.1 | osa-miR5540 | Translation | 4.5 | 18.792 | 1 | 21 |
| Osa05LNT0315500.1 | osa-miR5794 | Translation | 5.0 | 15.107 | 1 | 21 |
| Osa05LNT0315500.1 | osa-miR1861o | Cleavage | 5.0 | 15.26 | 1 | 22 |
| Osa05LNT0315500.1 | osa-miR1861o | Translation | 5.0 | 17.025 | 1 | 22 |
| Osa05LNT0315500.1 | osa-miR816 | Translation | 4.0 | 16.252 | 1 | 20 |
| Osa05LNT0315500.1 | osa-miR1429-5p | Translation | 5.0 | 19.988 | 1 | 21 |
| Osa05LNT0315500.1 | osa-miR1861a | Cleavage | 5.0 | 15.26 | 1 | 22 |
| Osa05LNT0315500.1 | osa-miR1861a | Translation | 5.0 | 17.025 | 1 | 22 |
| Osa05LNT0315500.1 | osa-miR396f-5p | Cleavage | 5.0 | 11.168 | 1 | 22 |
| Osa05LNT0315500.1 | osa-miR5340 | Cleavage | 4.0 | 20.418 | 1 | 23 |
| Osa05LNT0315500.1 | osa-miR2275c | Translation | 3.0 | 18.405 | 1 | 23 |
| Osa05LNT0315500.1 | osa-miR1857-5p | Cleavage | 3.5 | 11.255 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0315500.1 | 5 | qRFC-5 | Physiological trait | Eating quality | RG470 | RG474 |
| Osa05LNT0315500.1 | 5 | nan | Physiological trait | Eating quality | RM305 | RM178 |
| Osa05LNT0315500.1 | 5 | nan | Physiological trait | Eating quality | RM305 | RM178 |
| Osa05LNT0315500.1 | 5 | nan | Resistance or Tolerance | Drought tolerance | C43 | RZ70 |
| Osa05LNT0315500.1 | 5 | nan | Resistance or Tolerance | Drought tolerance | C43 | RZ70 |
| Osa05LNT0315500.1 | 5 | APAGE1 | Physiological trait | Eating quality | nan | nan |
| Osa05LNT0315500.1 | 5 | qNBL-5 | Resistance or Tolerance | Blast resistance | RZ649 | RZ225 |
| Osa05LNT0315500.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0315500.1 | 5 | QFla5 | Morphological trait | Culm/leaf | RG470 | RG346 |
| Osa05LNT0315500.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0315500.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0315500.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)