© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0315700.1
GGTTTATATATATACAACAGCATTACTGTCCTACAGTGCCAAAGATTTGATCTGAAGGGCACTGCTCCAAAAGCACCTACAAATTGCCAACAACTAGCCATGGATATATGCTTTACCATGTACAGTCACAGCTTGCGCCATTACACATCCGGGGTGAAGTGATCCTTGTGGCTGAGAATCTGTGCATCATAAGCCGCAATGGCATCAAACACCCTCAAATGGCTGATCACCTGAGCTCCACAGGCAGCATACTCTCTGCCCTCTTCCATCTCCTTAGGGAGATCATCAAGCAATCCTTGGGTGAAATCCCTTGGAGCGCCCCCGTCGTAGACGAAGTAGCATGGCTTCACAGCAACTTTCTCCAGGTTTTCACGCAGCAAATGCGAGCCGCCGTTTGTCTCCAGTATCTGCCCTCCAGCAGCTGCAATCAGGCTCTGTATGTGTTGTCTGTCGTCAGGGTTTATGTAGGCACTGAGGCAAAAGTTCAGTCCCGAGAACAACTTCTGTGCCCCTTCAGAAGCTTGATTTCTTCTTTTCTTGTTTCCACCAATTGATGCACGTGAGTCATGGCTAAATCTTAACTCAAAGGAAGCTTCTGGACTTGGAATAAACTTTACCAAGCAATCCATAATCCATCCAACCGTGACAACCCATTTCCCAAACAGTAGAGCCATCAGGACCTCATAAGATCGGCTCCATGCACTACCAGCACTTTTTCCAACGATAACATGGGTCACATTTTCAGTCCACTCGTTGACCACAGTTGCATCTGTCCAAGACGCAAACTCTTGCAAGGAATCCTTCTCGGATTCACTTAAAGCTGAACCAAGCAAAACCCACAGATCCGAGGGGCAATCTCTTTCTGTGTAAAGGTGATCTGTTTGCTTTTCTTTCCTGTATTCGTCAGTGGAAATTCCTTCTTTGTCCAAGTATTGGCCCTCAGGAAAGGAAGAACATGAAGTGTTAAGTTGATCTATTTCCCTTTTAGGAACAGCAGAAATTCCTTCTTTGGCTGAACTTTGTCCTTGAGACAAAGAACTTGATGTGTTCCATTGATCTATTATAGGATATTCCCATTCGCAATCAGCGGAATCGCTTTGTTCAATTGACGATTGGCTCTGAGGGAAGGAAGAAGAATTGCCACTCTCATTTCTTGGCGAGCTTATCTTATCACATGGTAGTGGCATCGTTGCATGTTCAGGGCACATAACACAACCGTTATCAACATCCCAGCGGCAATTCAAAGTCATCATTGCACATGGAACATGATAGCTCCTATTGCACTTTGTATAATAACACCCAAGAGCTGCTCCAGGAAGCTTGCATCTTTTGCACTTCAATTTCGCGGCACGTTTTATTTCCAACTCCAAGTTCACAATGGTATCACCTTCGTAAAATACTTGCGGGGCCCTTCGCAAAAGAAAAAAGTAGGGAAAGACAAACAATTTACCCAAGAAATAGTCCTTTGAGAGTAACTAGCTAGTGCCAACTGTTGCACTGGAAGAAGTAAATATAGTTTATAATGTAAAGCTAAATATACTAAAAATAAGAATTGTCTCCAAATCTAGAAAATTGAAAAATTACTACATGAGATCAATCAACCATCTACACATACACATGTGCAAACAAATCAACTTTTTGCAGAAGAATATATCATGCAAACAACAAAATTATGATGGGGGATGGAGGGAGGGGGATGTAGAACGCACCATCACCCCTCAACTACCCACTTTAATACCACTCCAGCCACTGGTTATTTTTATTAGGTATGGTTAGACTTAGCACGTCTCAAACATTGAATAGGCTGTTTAATGGCTAAAAAAAAATATCATGTGAATTTACTTTGAAATAGGAATCAAAATGGTAATTCTTGCATGCCACTAAAACTATATATCATACTGACTAATATTTGGACATAATTAAACAAATGGAATGGTTGTCTTATAAAGCAAACCAATAAGGTATTAAACTAAAAAATTATACAAGGGTCCAGATCTCAACAAATAAAAATAAAAATTGTCCAGCATCCTTGTATCTTAAACCTGCATTGGAAGCGCATGATGATAAATCTAAATTGTGGTGAATAAGCATCAAGAGTTGAAATATATTTAGGAACTTACCACTCCAGGCATTTCTTATGAACATAAATGATATCTGTTGGGCATGGACTGCCATTGTCACTGGACACAAGCTTTCCCTTTTGATAATGCGCCATTGGACCATGAAACTGAGGAGGTGTTCTAAATGAATGGCAGAAAACGCATTCATCTTCAAATAAGTTGATTGGCGTTTGCAGTCTCTTCAATCTAGTAGCACGTCCCATGTCTTTTGACATGCCATCGTTGCCATGTTTTCCAGGCATGTTGTTTTCTCTATCAGAATGTTGTCGAGTGTTGCTTAGATTAGAAAGAGGCAATGAAACTTCATTTGCATCTACCGCAGCTTTCTCATTTGAACCCTCTGCAGCCAATGCTGTCTTATTCCTAACAAGACGTGATTTACTCAGAAAGATGCTTTGCCTAGTCAACTAATTGCTGTTCATATGACTTCGTTGAAGAATCTCGAGATTACTGCTGTCCCTTTCTCCAAATACGCTGTCAGCCATTGTGCTCATGATCTGGTCGGCGATGGCGCTCTCCGCCCCTCTCCCTCCCCCTCCCCCTTCCTCCACCGCCCGGTTCGCGCGCGCGATCCGCCGAGCGAAGCGGGCTACGGCCTCTTCGCCGCCGCCGCCGCCGCCTCCGCCTCGGGCAGCGTCGGCGAGCGAGTGAGCGAGTGAGAGGAGAGGAGGAGAGGAGAGGAGGAGGGCGCGAGAGACGAGGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0315700.1 | 5 | 23932070 | C | A |
| Osa05LNT0315700.1 | 5 | 23934077 | T | C |
| Osa05LNT0315700.1 | 5 | 23934370 | C | T |
| Osa05LNT0315700.1 | 5 | 23934729 | T | C |
| Osa05LNT0315700.1 | 5 | 23934933 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0315700.1 | osa-miR5827 | Translation | 4.0 | 8.179 | 1 | 21 |
| Osa05LNT0315700.1 | osa-miR5827 | Cleavage | 5.0 | 12.583 | 1 | 21 |
| Osa05LNT0315700.1 | osa-miR6247 | Cleavage | 4.5 | 10.198 | 1 | 21 |
| Osa05LNT0315700.1 | osa-miR159c | Cleavage | 4.5 | 22.431 | 1 | 21 |
| Osa05LNT0315700.1 | osa-miR816 | Cleavage | 4.5 | 12.261 | 1 | 20 |
| Osa05LNT0315700.1 | osa-miR1429-3p | Translation | 5.0 | 14.688 | 1 | 21 |
| Osa05LNT0315700.1 | osa-miR1869 | Cleavage | 4.5 | 15.583 | 1 | 24 |
| Osa05LNT0315700.1 | osa-miR2093-5p | Cleavage | 3.5 | 12.542 | 1 | 20 |
| Osa05LNT0315700.1 | osa-miR2863a | Cleavage | 4.5 | 18.033 | 1 | 21 |
| Osa05LNT0315700.1 | osa-miR2868 | Cleavage | 4.5 | 8.809 | 1 | 20 |
| Osa05LNT0315700.1 | osa-miR5072 | Cleavage | 5.0 | 12.383 | 1 | 22 |
| Osa05LNT0315700.1 | osa-miR5522 | Translation | 5.0 | 18.978 | 1 | 21 |
| Osa05LNT0315700.1 | osa-miR5524 | Cleavage | 5.0 | 18.86 | 1 | 21 |
| Osa05LNT0315700.1 | osa-miR2876-3p | Cleavage | 5.0 | 21.399 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0315700.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0315700.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0315700.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Osa05LNT0315700.1 | 5 | qRFC-5 | Physiological trait | Eating quality | RG470 | RG474 |
| Osa05LNT0315700.1 | 5 | nan | Physiological trait | Eating quality | RM305 | RM178 |
| Osa05LNT0315700.1 | 5 | nan | Physiological trait | Eating quality | RM305 | RM178 |
| Osa05LNT0315700.1 | 5 | nan | Resistance or Tolerance | Drought tolerance | C43 | RZ70 |
| Osa05LNT0315700.1 | 5 | nan | Resistance or Tolerance | Drought tolerance | C43 | RZ70 |
| Osa05LNT0315700.1 | 5 | APAGE1 | Physiological trait | Eating quality | nan | nan |
| Osa05LNT0315700.1 | 5 | qNBL-5 | Resistance or Tolerance | Blast resistance | RZ649 | RZ225 |
| Osa05LNT0315700.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0315700.1 | 5 | QFla5 | Morphological trait | Culm/leaf | RG470 | RG346 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)