© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0315900.1
CTCCAATATCTGATGTTCATTAAAATGTTTGAAAATATTAAATTACACAGCTCACATGTGTATGATGCTTCCATTTTAAAAAAAAAAAAGCTTATAACAAAAGACAATAAGTATAACTATACAAGTCATCGTTGAGGCACATAGAAGAATTGCACCATATCTTGTCGTACCAACTTTGATAAAACCAATAAACCATAGCCCAATCAACCTCATTCTCATTCATCGGATTCATCTCAGCAATCTTAGCGTCCATTTTGGGATCAAAATAAATCCATTCCTGATATAGAGTGCACATCATAACGGCATAGCAATTGTATGCATTGATACGGACTTTAGTGTACATGATATGTTCGTAGTAACGTTCCCTCAAAATATTTTCTTGCAGCACCCCTGATACAGCCTGCCATGTAGATGCATAATCTTTATGTCTCGATGCTCACAGTAAATAAACGAACTTTTTCTAGAAAACAAATTGAGTAAAGCAGTTATAACTTGATATATTGTTATGTTCACAGACAAAGCAAAATGAGAGAAAAATAAAGTAAAACGGTAGGACTTGATATACCATTAGTCTCACAATGAAAGAGCAAATCTATGAAAAAAAAGGGGGGGCAAAAGTCAGACGATGCTTCTTGATTATGCATACCTAATGTTTTTTTAGCAAATACTACATCAAGATAATTGTATCAGTTACTCAGATGATCAGATCACATGATCCATGTTCTTTGCTGATACTAGTGTTTTCTTTTATAAGAAGTTGTTAACCAAATATTGAAAGAAATATTTTTTTTTCGGTTGATGTGGTAACGCTATCTGTGAACCTAAAGTTATATACATGCATATATATGTGTAACATGGTTGCAGTGCAGTGTAAAGCTAAGTTTTCGCTCTTTTTAAGACTAAGAGAGGAGGAGGAAAGGTGACAAATTGAGGTTATATTTGGTGTGTCAAGATAAAGTATATGGAGCTTGGATCAAAGCAAGACGAGTTCCAAACAGAGGGAAATAATTTCTCGTCTTTACTTGGTCTTGTCCATACTATTTTTCCTGGTTACAAACATGTATATTATTTCACTTCACAGTCAATGTGACCTTTGACTTGAATTAGTACACTTTAGCTCTAGCTTTTATCATGTGGATAAGAGGAGGACAATATCAGATTCTTTGCATTTGAGCTAAGAATCTCAATGTTCTCACTTTGTGTATGTGCACAGACACAGTGACTGGCTGCCTGCTAGCCCATCTATGACAAATGGATTGAAAGCTGCTTATCATAAAGCTAGTTGATATCTCTAACCAAACATCGTATAGCTATGTTCTTGATATACTGCAATATAAATAATCTGAAGCTACACGACTGGCGTTTGTTATATTAAGAGCAACAATGCAAAGATATGTAGGGCAACCGATCCACAGTATCTTCGCATCAGGATACTTCAGCAGATGAGCTGCCTTTGTCTTGGCAAGCTGCTCCACAGTTGTCAAAGAACCAATATCAAAATGCAATTTCAATATAGCAGCATCAATGAAGACAGTAGAAAAGGAGAGAGAGGAAATGATGGGTGATAAGCTTAGGCTGTTCTTCAGAGTGCTACTAACAGGCAGAGATAAAGTGCAGAGCTGTAGAACATCTCTTTCCGCTGAAGATTATTAAGAACATCAAAGTAAAATGTGAAACTGGATTAATAAAATGGATACTGAATTAATGTCGATAGTATTGAGAGATGATGATGCTAGTCTGGAGGTTTCAAAATGTTACAGAAGATTAATTCAATCAAAGGACACATTTGAACTTCAGAAAAGATAGCTGAAGAGAACATTTGCTTTTCATTCCTCAAAGATCAATTTATATTTTGAACTCATGAAACAGTAAAAGCTGAAGTACTCCTATAACACATTTAACCTGTCATGACCAAAGTAGCAACTGAGAAGAATTCAGAAATCATGGTTTGCAAAGAAATAGAGCATCAATTCACCAAATATACTGAACATTTCAACATTGGCACAATAACAACTAACTTCAATGCCTCAAGGAATATTCACTGTAAAATGAAGAACACTTTTCTTCTGTGAGGAATAAAATGAACCATATTTTTGTGAAGCTATGTTTAGAAAATTGCATGATATATTGTATTGCCAATATTCTATTTCTTAACCTATCCAACTAGGTCAAAGCTAGTTGGATAGGTCAAAGCTAGGTCAAAGCTATAACTATACAAGTGAACTGACAACAACAGGAATAATGCCTGCGAGTAGCTTTAACTGATAGGACCTATACTGAACTAAATTAGTTTGATGACATAAACTTGGCAGGTCAAGATACTCTCTGGGCTATCATAGGAAGAACCAAAGAGTATAATCTTTCTTACAACAAAGCTATGACCATTGACAAAAGATAGGCTGCTCTAGTTGCATAAAAAACTCACCAACAAGGATAATCATATAATAGACTATTTGTCATATTTCAGACAATAATAGACATATATACATGTTTTTTCCGATACTTCTATGATATCATTTGTGTCTTTGTGTATTCAGCTTATTATTTTTTGCATTTACATCGTTGACCTGGTTCTGGTTACTAAATAGGACAAATTTTATGCTTGTAGATATATATGAAATACACCTAATTGAACTTGATTTGTGTTGAAAGTATAGCACAGCTAGAAGGCAGAGCCAAACAGAGATGTAATTAACATGCCTGGGTCCAGATTGAAGACCCTATCGAACAAATAGAGGAAAGGACAGAAAGGGGAAAAAGTAAAGTCTAAGCGACATATGGCACGAAAAGGAAATCCAATTTCGGTAAGACTTGATCTGAATCGTAGTTCAGATCCAAGTCGGTTCAGTGAGGGCAACCGCGAAAGTCACCGAATGGGTTCGGTCCGTCTTTTCCTGATCTTTGTTTGTCCCCCCAAAAAAAGGCGTGAGAGGACGTTGCAGATGTCCGGGACGGACACGACTTCTTCTAACGCTAGAAGACCACAGGAAGAAACCCGGGACCAGAGCATGTCGTGAAAGACGCACACGGGGCGGGCGTGCTTCGTTGTTCAAAGATGTTCCAGATGATTGGTCTTCTGCCACCCTCAGCTGCACCACCCTTGTACTGTGAATTGCACAATGGTGTATTTGTTGTCCACTCCTGAAGTGTCTTCAAAGACCTGCACAACAGCCTCTTTCACCATCAACTTCCAGAATTTGGCCACACCGAGTGGTTCCATCTCCCAATCGGATGTTTACAATTTCCTAGTACTTTACTTTATCCAAGATAAACAGAGGTCCTGGCACACCAGACACAATCGAACATTTCTATTATCGAGAAAAAAAAAGATACATGAGGTAACTATCTCTACCTTTTTATTATCTCCTTAAATCCCTTGTTATTCTGTCTTCTTTGAGGCAAGCGATACAATTGGCATCAATCCACACGGACTACAATTTTCTCTTCAGTTGTGCCTCGGATGGCTGCAGCACCAGTCATCCCCCTCGTTGATGGATGTGCCATGGATTTGTGTCCTCCTCGTTGAAGGCTCAAGAAGACACGGCGACGTAGAGCAGGTTCGCCAACACACCACCTCGTGGAGGGATCAAGGCACCGCCTGAGACCTAGTGTTGGATGAAAGGGGAAAAGGGTGTGCGGTGGGGAGGAGGGATGGGTAGATGGCGAAGGGGATGCCGCCGGATCCAGAGGGAGAAGTGGCGCCAGCCACGGGGCTACAACGACAAGAATGGAAAGGGGAGGAGCGGGTGGTTGACGTAGACTCGAAAGGAGAAAGAGGAGCCGTGTGCGAGGGAGGCGGAGCGGCAGGAGTTGGAGGAGACGCAGGGGGAGGGCGGCGTTGTGGAGAGGTGAGGACGGGAGGAGGAGCAGGCGGCCAGGATGCGGGAGAAGAAAGGGGAAGGGAGCACC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0315900.1 | 5 | 23992285 | A | G |
| Osa05LNT0315900.1 | 5 | 23989038 | A | G |
| Osa05LNT0315900.1 | 5 | 23989041 | A | G |
| Osa05LNT0315900.1 | 5 | 23991465 | T | C |
| Osa05LNT0315900.1 | 5 | 23992910 | G | A |
| Osa05LNT0315900.1 | 5 | 23991007 | C | T |
| Osa05LNT0315900.1 | 5 | 23990910 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0315900.1 | osa-miR5815 | Translation | 4.5 | 14.806 | 1 | 24 |
| Osa05LNT0315900.1 | osa-miR5815 | Translation | 4.5 | 13.723 | 1 | 24 |
| Osa05LNT0315900.1 | osa-miR5143b | Cleavage | 5.0 | 23.41 | 1 | 24 |
| Osa05LNT0315900.1 | osa-miR5143b | Cleavage | 5.0 | 10.793 | 1 | 24 |
| Osa05LNT0315900.1 | osa-miR156j-3p | Cleavage | 5.0 | 11.928 | 1 | 22 |
| Osa05LNT0315900.1 | osa-miR535-3p | Cleavage | 4.5 | 15.471 | 1 | 21 |
| Osa05LNT0315900.1 | osa-miR814a | Cleavage | 5.0 | 16.194 | 1 | 22 |
| Osa05LNT0315900.1 | osa-miR814b | Cleavage | 5.0 | 16.194 | 1 | 22 |
| Osa05LNT0315900.1 | osa-miR814c | Cleavage | 5.0 | 16.194 | 1 | 22 |
| Osa05LNT0315900.1 | osa-miR1878 | Translation | 5.0 | 19.481 | 1 | 24 |
| Osa05LNT0315900.1 | osa-miR2090 | Translation | 5.0 | 12.872 | 1 | 22 |
| Osa05LNT0315900.1 | osa-miR2101-5p | Cleavage | 5.0 | 10.349 | 1 | 22 |
| Osa05LNT0315900.1 | osa-miR2922 | Translation | 5.0 | 20.696 | 1 | 20 |
| Osa05LNT0315900.1 | osa-miR2930 | Cleavage | 4.5 | 15.583 | 1 | 22 |
| Osa05LNT0315900.1 | osa-miR5143a | Cleavage | 5.0 | 23.41 | 1 | 24 |
| Osa05LNT0315900.1 | osa-miR5143a | Cleavage | 5.0 | 10.793 | 1 | 24 |
| Osa05LNT0315900.1 | osa-miR5160 | Cleavage | 5.0 | 10.317 | 1 | 22 |
| Osa05LNT0315900.1 | osa-miR156j-3p | Cleavage | 3.5 | 15.68 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0315900.1 | 5 | qNBL-5 | Resistance or Tolerance | Blast resistance | RZ649 | RZ225 |
| Osa05LNT0315900.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0315900.1 | 5 | QFla5 | Morphological trait | Culm/leaf | RG470 | RG346 |
| Osa05LNT0315900.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0315900.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0315900.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Osa05LNT0315900.1 | 5 | qRFC-5 | Physiological trait | Eating quality | RG470 | RG474 |
| Osa05LNT0315900.1 | 5 | nan | Physiological trait | Eating quality | RM305 | RM178 |
| Osa05LNT0315900.1 | 5 | nan | Physiological trait | Eating quality | RM305 | RM178 |
| Osa05LNT0315900.1 | 5 | nan | Resistance or Tolerance | Drought tolerance | C43 | RZ70 |
| Osa05LNT0315900.1 | 5 | nan | Resistance or Tolerance | Drought tolerance | C43 | RZ70 |
| Osa05LNT0315900.1 | 5 | APAGE1 | Physiological trait | Eating quality | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)