© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0316300.1
GCTGGTCGTGGTGCCTTCTCTCTTCACAAATGGTCCCTTGTGAGCTGCTATGAATAATTCCATCTATACTTATGTCTGGAAACACCGTGCTTTGGACCAAAGAAAAAGTTCTCTTTTTTTTTCATTTTTGTGATTACAATGAAATCGCTGGCCAGCAGGTCCAGGACAACATCAGGGGGCTCCATTAAAGCAACCTGGAGATTCCTCATGAGCTAGGGTTAGAACCCAACATGGACATGGCAATGGCATGAACCACTTGGTTACAGTTACACACTTGCACCGACAATAGAAAACACGAGAACTACTGTAAACTGAAGAACATATTCAGCACCTTTTGAATACGAACAGGGCGTCGTTAAGCTGAGATATCAAAAGAATCCCCTTCAGTCGCATTCTTCAGGATCACAGAATTGGGTTCAACTAACAATATTCTAACGCCCAGATTCGTCGCTGTTTCCGAACCCTTGATACAGGATATCAACCAGATTACAACTCAAACGTGATCACGGATCATAAAACAAACTCAAGATGCTGAAAGGAAGACACGCCATCAAGATTTATTGTGAGAATACCCTGACCCGGCAACTGCCATCTTGTCCCCATCTCGTTAACTTTCTAATTCTCCACCCTGAACGCTTTAACATACTATCTGCTCGACTTCTGGTAGCATTCGCCAACAAACCAATTCATTTGCGGTTTTGTTCACTTCCCCTTCTCTGATGCTCAATGGATATACAATAAAAGCAATAGTAGAGTTTGTGCTTCTGTTCACTTCCCTTTCTCTGATGCACAACAAATACAATAAAAGCAAGGATATAGTTTTTGTCATCCAAGCACACTGATCCAGGACCAAATCACCACGTGACAGTGGATTGAAATTACTCAACCAACATACATGTATCATGTATGGTCCAATATGAGTGAGCATGCAGAGGGCAGGTAGGGTTTGCATTCTGCCAAGGTCTATTTGCGATGCACCGACCCAACAGCAGAAGACTGCAAACACTGCATGGTCTACATCCTTCAGAAAGAGGGTTTATGATTAATCAGCATGGCTCAAACGGCCATGTTTATGGTTCACGTCAAACACTTTGTAAGCTAGAACTGTAGTTATGTTATTCTGAATCACAAGAGGAAAAAACCCTGGTCACTTCCATCATTAAGTGAAGTTAGTGAATCACCAACACCCTCGTTGCAGTATTTTTCTGAATGTGTTACTTGCCCATCAATATTTGCAGCATGTTTCTGGATATATTACTAGCCCATGAATATACACGTGAACTAGAAACACATCATGCAGCCCTGTTTGAACAACTCGAATCACATCTCCTCTAAGTGAAGGTAAGATCCAAAGAACTGAAAGATCTCCAAGATATCTCTCCAACCCCTCTAACCAACCAAGCTAATATCATGAAGGAATAATAAACAACGGATCATCAAGTTATGGCTTCAATGCGCACCCAAGAACCTACCCAAGAACCTACACAAACTGACCCCCATTCTGCCCTGTCATCAACAAGATGAAAATCATGAAACATAACCTCATCGTACTCTTTTCCCTTCCTCGTCACTTATTTTTCACGCCTGTGCTTGGGCTTTGTATCAGTACTGCTATCTTTGAGAAGTAATATATTCAGGTGGACCATCGCGGTCTTCAATTTACTAAATAAAGACTGGGGATCAGCATCAACTCCACTGGAATCTCGAGAGCAACATCTCTCAGAGCACAGAATTAGTAGCCAAAGGGAACTGATTTACTGAACACTTGATAATCATCTTGGTGCAAACAAGTACCATGTTTCGTGCCTTCATTAAGAATTATTGGAAGCAGATGCAGTCAGCAAGATGCCATCTTACTCTAGTAATTATCGAGCAATTCAGCAGTGCTCATTAGGGCAAATGTTCCACTCATAGCATAACCAGATCAAACATATAATCCATGGTGCCTTTTAGGGAGATCAAGAAAACAATATTATCATTGATGACAGCTTGTTAGTGCCGATGAGCTCCATGTAGACTATGTTGTGTACTTACTCAAAACATCTAGCACAGCAACAAAACGCATTGGTAGGCCAGCAGGCTCAAACCCCATCTCTTCAATGTTGTAGCTCATAATTAGAAGCCTGGATCTCATGATGTGCGATAACGATCAACATATGCCTTCACAAGTTTTTCTATCTTTGGTGCAGAGGCTGTTATATAAGTAGTTATCGCCTTCTCAGTCTCTGGCATCTGATTTGGCTCAAGTGAAGCAAAAATCTTATCAACAGATTTTTTCACAATCAGTTTATGAGCCTCTTTACTCAAATTGCCTTCCTTCCAGATTGGTTTCACCAGCTCCTTTACATGCTCCACCAAATGAAAACGAAAGTCTGATTTCTCATTGTTAAGTGATGCATCATTTTTCCTTTCACAGGTTTTCACCCTATTATCACCATCCAGGCTAGAGCTGTGTCCCCTATCATATGAAATCAAACCAAAATCATTTGATCCTTTAGCAGATACATTCCTTGCCAACTTGTCAGCAAAAGTCAATGGTTTTTCAAGACTTCCCCCTCTTATAACATTCGTATCTACATGTTGGCTTGAAATGCTGCAGGATATGTTTGAGGTCTTCAGATTATTTAAACTTTCAACTTTGGGAGGGTCGATACTGTCGACAAGTGGGTCATACTGACTTTTTGAAGGTGATGTACTGCCAGGAAAATCAGGAAAATTAAAAGAAGGTACAAAAGGCACTGAAGTTATCCAAACCTCATCCTTGATTGGGGAAAGTTTCCCAGCCGATGCTACCACAGGTTGAGATGAACTGCTCACATGTAATGTAGACCTAGAGGTACCACCCTTGTCAAAATCAGCACCTTTATGGTGACTGGCATCCTTATCAGGTGTTAATTGATGAAGAGGCAGGGTTCCATGGTGAGAAGTTGCTCGGAGAGACTGATTAACCAAGAAAAAATCAGAGCTGTCATGACCTTGCTTTCTGAATCCTGTATAACTATTCAAACTGTATGAGACATGGCTTGAACTTTTTTCTTCCTGATGTTTGTGAGGAAGATTCTCTGTTGCTCCACCATAAGCTGACAACTTCTTGCTATATTGGTGAGGATCTAATGAAATAGTTGAGTCAAACGGTTGATACCGATAATCAGGCTTTAAGGGGTTCTTTTCAAGGTAAGATCTTGATAGATGTGAATCCCTTGGACTGTCACCCTTGGCCACTTCAAACTGCAGCTTTCCTCCATCTAGGCGCAATCTAGAATAGGCACCCATGTCATTCAAACAGTTGTTAGTGCCCAAACTAATTTGATGTCCCATGAAATAAGGTTCATGATTCTTCTCTTGAACTACTGGAAGCTGAACCACCTCATTAGTAGGATTTGCAGTCAATGAACCACCAATTTTGAAACCATGCGAAGCCTTTAGCATGTGACAACTATGTTTAACAACGGGATGTGTCAACCCCCTATTATCTTCACCATATGCATGAACAAGGGTCCTATATATCTCATGTTGGGATGACCCCGCTGAATTTTTGAACTGGTGCTCTTTTGAGCTGGATGGATGTTGTATTTCAGATCCTTCTCCAGTGCCTCCATGATTTCCATAAACCTGGTTATCAGAACCAGATACCTCCCCTTCATGAAGAAAAGTGCAACTCTTCCCATTCTTGCATCGCCCTTGAGCATAAAAGGTACAGGTACGCTTTCTGGTTTTGTTCTTCATATCTCCACCAGGAGATGAACTCAAAGCATTAGAATCAGGTGGGCTTTGTGATACATGACCACCATGCAAATGAAGACCTCCAGTTTTGGATGTATCATCAATGGTAGGAGGTACAGGATCATTCCCAGCTTTCTTCTGATATTTTTCATCGCCATGAAGCTGCAGTGCTGGTTTCTTCTCAGCAGCAATCACTCCAACAAAACCGTTGGGATCCTTGGAGTTGGGCGACGGGTCCCTGGCCCTCTTCGTCGTCCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0316300.1 | 5 | 24454774 | G | A |
| Osa05LNT0316300.1 | 5 | 24454807 | C | T |
| Osa05LNT0316300.1 | 5 | 24456010 | T | C |
| Osa05LNT0316300.1 | 5 | 24456843 | C | A |
| Osa05LNT0316300.1 | 5 | 24457660 | T | C |
| Osa05LNT0316300.1 | 5 | 24458478 | A | T |
| Osa05LNT0316300.1 | 5 | 24458527 | A | G |
| Osa05LNT0316300.1 | 5 | 24458531 | A | C |
| Osa05LNT0316300.1 | 5 | 24464061 | T | C |
| Osa05LNT0316300.1 | 5 | 24466751 | A | G |
| Osa05LNT0316300.1 | 5 | 24469216 | G | C |
| Osa05LNT0316300.1 | 5 | 24454562 | T | C |
| Osa05LNT0316300.1 | 5 | 24463693 | A | G |
| Osa05LNT0316300.1 | 5 | 24466970 | T | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0316300.1 | osa-miR393a | Translation | 5.0 | 23.9 | 1 | 21 |
| Osa05LNT0316300.1 | osa-miR393b-5p | Translation | 5.0 | 23.9 | 1 | 22 |
| Osa05LNT0316300.1 | osa-miR437 | Cleavage | 5.0 | 17.14 | 1 | 21 |
| Osa05LNT0316300.1 | osa-miR1850.1 | Translation | 4.5 | 11.842 | 1 | 21 |
| Osa05LNT0316300.1 | osa-miR1852 | Cleavage | 5.0 | 14.898 | 1 | 21 |
| Osa05LNT0316300.1 | osa-miR1871 | Cleavage | 5.0 | 17.672 | 1 | 24 |
| Osa05LNT0316300.1 | osa-miR2096-3p | Cleavage | 4.5 | 19.085 | 1 | 21 |
| Osa05LNT0316300.1 | osa-miR2101-3p | Cleavage | 4.5 | 19.071 | 1 | 22 |
| Osa05LNT0316300.1 | osa-miR5151 | Cleavage | 5.0 | 14.924 | 1 | 22 |
| Osa05LNT0316300.1 | osa-miR5339 | Cleavage | 4.5 | 18.283 | 1 | 21 |
| Osa05LNT0316300.1 | osa-miR5498 | Cleavage | 3.0 | 11.727 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0316300.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0316300.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0316300.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Osa05LNT0316300.1 | 5 | qRFC-5 | Physiological trait | Eating quality | RG470 | RG474 |
| Osa05LNT0316300.1 | 5 | qRGR-5 | Physiological trait | Germination/dormancy | RM421 | RM480 |
| Osa05LNT0316300.1 | 5 | nan | Physiological trait | Eating quality | RM305 | RM178 |
| Osa05LNT0316300.1 | 5 | nan | Physiological trait | Eating quality | RM305 | RM178 |
| Osa05LNT0316300.1 | 5 | APAGE1 | Physiological trait | Eating quality | nan | nan |
| Osa05LNT0316300.1 | 5 | qNBL-5 | Resistance or Tolerance | Blast resistance | RZ649 | RZ225 |
| Osa05LNT0316300.1 | 5 | QFla5 | Morphological trait | Culm/leaf | RG470 | RG346 |
| Osa05LNT0316300.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)