© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0316400.1
AGCCCAAGAAGTTAGTAGTAGTAATAAACATGGTTGAATAATGCATTTGATTGAAATTACTAGTTTTACATTTGATTACATGGAGCACCTGATTCTTCTAAACAAGCTAATGTGCTATCGGATCATCAATTAGTTACAGCCACCGATAGCACCCCCTTTGAGGATCAGTGCTGCAACACTTCCTCCTCTACCATATACCCGGTAGGGTGCCTGCCTGCTCCAGAAGAGGATACACCGTCCATCAGGCATGGAAATGTTCTCCTTCTGAACCACTGAACACATGAGATTGCTTGATTCGGCATTGCTTATATCTTCTGCTTCAGTGCCTGACGCAGCTGGACCTTATGCCCGTCGAGCTTTGCCTCCAGAAGTTTGGACTTGAGGTTATGCGTGTTCTGTTTCTGCGCGCCCCGGGGCCACTCTATGCATCCTTTCATGGCACGAACCACATGAGGGTTTAGCAGGTCTGGACTCCATTCTCCGACGCTTGGTGAAACTGTGCACACTTCTCCGTTCTTCAAGCTAGGAGAAAGTGCAGCATTTGACATTCGACCGCTTGAGAGCCTGCCGTTCAGTAACTCGGATCCCGTCTTCTTATGGCCATCACCATTCGACGATCTCCACAGTCTGCCAAATGAAGACCCCTTCTTCCGGTACTTCTCTGCTGTTGTTGAACAGACTTCACTGATCTCGCTATTTGACCTGTTGTCATCCCAATCTGTTCCACTCACCGATGCATCATTTCCACCACAAAACCCATTTACCGATGGTTCGCTTCCATCCGGTGAATTGCTAGAGCCCTGCTCATCAACATGGCTGACAGTCTCCCATCCACTATCATCTTCCTCCTCATTTCTATCACACAGTTGATTGGAATATTTGTTCAATGGTTTTTCCAAGAAGATGTCTGTTTCCGGACTAACTGTATGGATCTTCGTTGCATGCCTCTTGGGGGTACCTCCATTACACTGCCCAATCTCCTTCTCATTAGCATCATCCCTCTCTCTGAGTTCCTCGAACACAGCAAAAATGTCCTCTGAAGGAGGTGGTGGTTTGTAAGAGAACTCTTTGATGTCATGAAACTTCATGGAGCAAATTGCTTCCCTGAGCCTTTCTCCATCTCTTAATGCTTCTTTGTTCACACCGTTGCCTTGGTGGAAACTGAGGAAAGACTCAAGGTCAGACTGAAGCTTGCTTAGCTGTGAATACTTGCTGTCCAGTGTCAGCTTTGCATCAACAAGCTTCATCTGTACCCTCTCTTCACGCCAAACCTCTGCCATCTGCAACATCTTCTTTTCTTCCTCCACCTCATCTCTCATCTTCATTGATTCACTCTTCAGGGCCTCAACCTCAGCTTTGTCTTCCGCAATCTCCTTCGCTAATTCGTCACAAACCTCCTCCATTAACTCCCTAGCCTTCCGTTCCTTTTCATAATCTTGCAAATATCGCTTCGCTGCTGATTTCAACTCAGATAGCTCACTGACCAACTTGGAATTCATGATTTCTGCCCTTTGACGATTTTTCCTCTCCCGGTTCAGTTCCTCTTTAACAGCATCTAAGATGTTTCTAACCTTATCATTCTCCTTGCTCCTCCAGGATGCCTTTTCCTCAGCAAGGTTCCTCACCAGGTGATCAAGCTTCTTCTTTGCAGATCGACTCTCAGCTTCAAGCTCATGGATCCGGTTGTGGGCCTGCAAAAGCTCTGCCTTTAACGCAGAGATTTCTGCATCGGCAGATACCGGATAACGGTCACACAAAGCACCATCAGTACCCCTCAAATTGTTGAGGCCCCGACGGTCCCACTTTGTTGCCACCTCCATTTCAATTCGAGGGGATGGAGAGTAAGCTCCCACCTCCTGAATGATGTCGTTGCCAAGAGGCTTACTTCCTGTCCTACCTTCAAGAAGCGCTTTATAATAATTACAACGATCAGGCGTATGCGGTTGCTTTGGGCTAGGCTCGAACCGTCGGCGCGGCGCCTCCCGGGACTCCGTCGGCGGCGGCGCCTGCGGCGGATGCACGCGCCAGAGAGCCGCCGCAATCTTCCTCACCGACGCGCCCGCGCCCGCTCCGGCACCGCACGGCGCGACGGCGTCCCCGCCGCGGGCCGCGGGCCACCGCAGAGGCGGGGTGTCCG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0316400.1 | 5 | 24541484 | A | C |
| Osa05LNT0316400.1 | 5 | 24541491 | T | C |
| Osa05LNT0316400.1 | 5 | 24544001 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0316400.1 | osa-miR5534a | Cleavage | 5.0 | 9.361 | 1 | 21 |
| Osa05LNT0316400.1 | osa-miR5534b | Cleavage | 3.5 | 9.361 | 1 | 21 |
| Osa05LNT0316400.1 | osa-miR164a | Cleavage | 4.5 | 21.401 | 1 | 21 |
| Osa05LNT0316400.1 | osa-miR164b | Cleavage | 4.5 | 21.401 | 1 | 21 |
| Osa05LNT0316400.1 | osa-miR164c | Cleavage | 5.0 | 21.401 | 1 | 21 |
| Osa05LNT0316400.1 | osa-miR164d | Cleavage | 4.5 | 21.401 | 1 | 21 |
| Osa05LNT0316400.1 | osa-miR164e | Cleavage | 4.5 | 21.401 | 1 | 21 |
| Osa05LNT0316400.1 | osa-miR164f | Cleavage | 4.5 | 21.401 | 1 | 21 |
| Osa05LNT0316400.1 | osa-miR1423-3p | Cleavage | 5.0 | 9.454 | 1 | 21 |
| Osa05LNT0316400.1 | osa-miR1863a | Translation | 5.0 | 21.105 | 1 | 24 |
| Osa05LNT0316400.1 | osa-miR2096-3p | Cleavage | 4.5 | 12.785 | 1 | 21 |
| Osa05LNT0316400.1 | osa-miR2105 | Translation | 4.0 | 8.766 | 1 | 20 |
| Osa05LNT0316400.1 | osa-miR5499 | Cleavage | 5.0 | 11.787 | 1 | 21 |
| Osa05LNT0316400.1 | osa-miR5499 | Translation | 5.0 | 18.381 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0316400.1 | 5 | nan | Physiological trait | Eating quality | RM305 | RM178 |
| Osa05LNT0316400.1 | 5 | nan | Physiological trait | Eating quality | RM305 | RM178 |
| Osa05LNT0316400.1 | 5 | APAGE1 | Physiological trait | Eating quality | nan | nan |
| Osa05LNT0316400.1 | 5 | qRGR-5 | Physiological trait | Germination/dormancy | RM421 | RM480 |
| Osa05LNT0316400.1 | 5 | qNBL-5 | Resistance or Tolerance | Blast resistance | RZ649 | RZ225 |
| Osa05LNT0316400.1 | 5 | QFla5 | Morphological trait | Culm/leaf | RG470 | RG346 |
| Osa05LNT0316400.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0316400.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0316400.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Osa05LNT0316400.1 | 5 | qRFC-5 | Physiological trait | Eating quality | RG470 | RG474 |
| Osa05LNT0316400.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)