© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0316500.1
GAAGTGCAAAGCAGCATTAAGGCAAATGCAAGGTTTTTAAGATACAACACGAATACACTCTGAACATCAACTGCCCTTATTTAGGGCATTATGATGCATTACAGTATCCCCCCATTTTGGGGTTCCCTTCTGGGTGTACTCTACCAAAATACATAAATAGCAAAACATACACATTTTCAAGATTACGGACGGCACAATACAGACAGGCACACGTATTAGAGGCCTTCAAGTACCAGGTCCTTGCAGGGGGCAACCAACAGCTTGCGCTTAACGAACATGAGAACATAGTGAACCACCTTCCACAACATACAAGAGCGATATGTACTAAAGCCTCAAAGCAACCACCTCTTCAACAGTTCAGACGCCTTCTTTCTCACAAAGGTCTAGCAGTGATAAGGTCTCAGCTATGGAGAGCTCAAGACGAAACTTTGGACCATCGTAATGGTGCAGCACTGGTCTGAAAGCATCCTCTTCCAAAGGCTTGCAGAGCTTTCTAATGCGGATCCTCACCTGCGCTGGGAATCTAGATTCACCTTTACACTTCTTATCTTCCCATGCAGTGGGATCAATATTAGATCCTCCAAAACTAGAAGCCTCAAATACCCCATGAAGCTGATGGGTCGTGTAGTTATAGAGGAAAAGAGGTAGACCAGGAATAATTGCTCGGACTGAATCACGATATCTTGCTGGCAACCCAAAAAGCTGCCTCTTGAGATCCTCCTGCATGGTGTCATTGTTGCAAACAAAGATATATCCACCGAGCACTTCATTCCTTGGTAGCATCTCACTTGTTGGCAATGTTTTGAATCGTTTGTCAACAGCAGAGTTGCTGCTGTTGTTCCCGCTGCTGTTACTTCCATTGCTGTTGGCACCACTGTTTTTGCCATTGACATCTTTGCCATTTGGACTATGCAAATATTTGTTGACCCCAACATTCATCTTGAACGAGTTAACATTGCCATTGCCTCCCTTGGGGTACAGCTGATTCATGTTGTAGGCCATGCCGCGGAAAGGATTCTTCATAGCTGCGTCATTCATCCTGATGTCGTTCATCTTAAGATCTAGATTCATAAGGCCAAGATTGAGGTGGTCCATCTTGCTCTCATCTTGGTGGTAGGATACCTTATCCCATTGCTTGACATCAGGGATGGTGTTCATCCGCGCATAGTCAAGCTCATTCGTCCTCTCCGCCTTGGACTTGTTGATCTCAGCCAACTTCGATGTCATGAGAGACCACTGACGGTCCTCCACTACCTTCGACTGCCCACGGAACTCATCCCCGAGATGCCACAAGTTGTCCATAGCTCAGCTCAGTCTCTCCACCAGGATCCCCTCCCCTGCTCTGCTCGCGAGTCGCCAGATGGAGATCGCCGCCTACTCCCCCTCTTCTGTTCAGCCGCGACTCGTCTTGGGGAGGCGCAAGGAGCG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0316500.1 | 5 | 24552635 | C | T |
| Osa05LNT0316500.1 | 5 | 24553323 | G | A |
| Osa05LNT0316500.1 | 5 | 24554367 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0316500.1 | osa-miR5528 | Translation | 5.0 | 24.357 | 1 | 21 |
| Osa05LNT0316500.1 | osa-miR5813 | Cleavage | 4.5 | 21.816 | 1 | 22 |
| Osa05LNT0316500.1 | osa-miR166a-5p | Translation | 4.0 | 13.906 | 1 | 21 |
| Osa05LNT0316500.1 | osa-miR166e-5p | Translation | 4.0 | 13.906 | 1 | 21 |
| Osa05LNT0316500.1 | osa-miR395b | Cleavage | 4.5 | 17.867 | 1 | 21 |
| Osa05LNT0316500.1 | osa-miR395d | Cleavage | 4.5 | 17.867 | 1 | 21 |
| Osa05LNT0316500.1 | osa-miR395e | Cleavage | 4.5 | 17.867 | 1 | 21 |
| Osa05LNT0316500.1 | osa-miR395g | Cleavage | 4.5 | 17.867 | 1 | 21 |
| Osa05LNT0316500.1 | osa-miR395h | Cleavage | 4.5 | 17.867 | 1 | 21 |
| Osa05LNT0316500.1 | osa-miR395i | Cleavage | 4.5 | 17.867 | 1 | 21 |
| Osa05LNT0316500.1 | osa-miR395j | Cleavage | 4.5 | 17.867 | 1 | 21 |
| Osa05LNT0316500.1 | osa-miR395k | Cleavage | 4.5 | 17.867 | 1 | 21 |
| Osa05LNT0316500.1 | osa-miR395l | Cleavage | 4.5 | 17.867 | 1 | 21 |
| Osa05LNT0316500.1 | osa-miR395s | Cleavage | 4.5 | 17.867 | 1 | 21 |
| Osa05LNT0316500.1 | osa-miR395a | Cleavage | 4.0 | 17.867 | 1 | 21 |
| Osa05LNT0316500.1 | osa-miR166h-5p | Cleavage | 5.0 | 13.906 | 1 | 21 |
| Osa05LNT0316500.1 | osa-miR395m | Cleavage | 4.5 | 17.867 | 1 | 21 |
| Osa05LNT0316500.1 | osa-miR395n | Cleavage | 4.5 | 17.867 | 1 | 21 |
| Osa05LNT0316500.1 | osa-miR395o | Cleavage | 4.0 | 17.867 | 1 | 21 |
| Osa05LNT0316500.1 | osa-miR395p | Cleavage | 4.5 | 17.867 | 1 | 21 |
| Osa05LNT0316500.1 | osa-miR395q | Cleavage | 4.5 | 17.867 | 1 | 21 |
| Osa05LNT0316500.1 | osa-miR395w | Cleavage | 3.5 | 17.867 | 1 | 22 |
| Osa05LNT0316500.1 | osa-miR395r | Cleavage | 4.5 | 17.867 | 1 | 21 |
| Osa05LNT0316500.1 | osa-miR812a | Translation | 5.0 | 23.27 | 1 | 22 |
| Osa05LNT0316500.1 | osa-miR812b | Translation | 5.0 | 23.27 | 1 | 22 |
| Osa05LNT0316500.1 | osa-miR812c | Translation | 5.0 | 23.27 | 1 | 22 |
| Osa05LNT0316500.1 | osa-miR812d | Translation | 5.0 | 23.27 | 1 | 22 |
| Osa05LNT0316500.1 | osa-miR812e | Translation | 5.0 | 23.27 | 1 | 22 |
| Osa05LNT0316500.1 | osa-miR2905 | Cleavage | 5.0 | 14.52 | 1 | 21 |
| Osa05LNT0316500.1 | osa-miR395y | Cleavage | 4.5 | 17.867 | 1 | 21 |
| Osa05LNT0316500.1 | osa-miR5505 | Cleavage | 3.5 | 23.568 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0316500.1 | 5 | APAGE1 | Physiological trait | Eating quality | nan | nan |
| Osa05LNT0316500.1 | 5 | qNBL-5 | Resistance or Tolerance | Blast resistance | RZ649 | RZ225 |
| Osa05LNT0316500.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0316500.1 | 5 | qRFC-5 | Physiological trait | Eating quality | RG470 | RG474 |
| Osa05LNT0316500.1 | 5 | QFla5 | Morphological trait | Culm/leaf | RG470 | RG346 |
| Osa05LNT0316500.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0316500.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0316500.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Osa05LNT0316500.1 | 5 | qRGR-5 | Physiological trait | Germination/dormancy | RM421 | RM480 |
| Osa05LNT0316500.1 | 5 | nan | Physiological trait | Eating quality | RM305 | RM178 |
| Osa05LNT0316500.1 | 5 | nan | Physiological trait | Eating quality | RM305 | RM178 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)