>Osa01LNT0028400.1

GGTGAATATTGAATTCAAAAATAGCAGGACCATCCGATGGAGAAAAATAGTAAAGCTTGGTTTTTCTGGAGCTTTTCAACGCCTGCCTCACATGTGTGAGAGAGCAAAGAAAATTTAAAAAATGCATAGGGAATAGAACTAGCAATAGAACTATCGAAATAGAAGGCTTTCCAAGCAATCCATAGTCCCACACGGCACATAACTGTAGAAATGTTTGCAAAGTTCAGAAAACAAAAGGCAAAACCGCCACCTAATTTTGGTATATTCTAAAAATTAGTCCATAAAAATAGTGTGTATTGTACATTTTGTCCCAAGATTAAATTAGCATTGGGTACAACAATTAATTCTATAAGTTAGGCCACTTGACTGTGCATGAAAAAGATCTAAAGTTTGGACAATTTTCATAATAATACGTAGAGCTTTTGGTTTAATTCAGAGAAAGGTTTCCATAACTACAATGATTAAAAATAATTCGTGCACTTAATATAATACATATGTTCCACAGGGCGGGCATGCGGGAGCGCCAGTCCCACGCTCCCAACGGCGGGAGCGTATCGGTCCTGCACGACCAGCTCGGTCCCGCATCACCAAACAACG

Explanation	CPC Score
noncoding	-1.31047

Transcript ID	Chromosome	Locus	Ref	Alt
Osa01LNT0028400.1	1	25391975	G	T
Osa01LNT0028400.1	1	25392090	G	A

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa01LNT0028400.1	osa-miR5541	Translation	5.0	15.944	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa01LNT0028400.1	1	nan	Morphological trait	Root	RM23	RM306
Osa01LNT0028400.1	1	nan	Physiological trait	Source activity	RG532	RM472
Osa01LNT0028400.1	1	nan	Resistance or Tolerance	Salinity tolerance	RM1	R886
Osa01LNT0028400.1	1	nan	Resistance or Tolerance	Salinity tolerance	RM1	RM5
Osa01LNT0028400.1	1	nan	Resistance or Tolerance	Salinity tolerance	RM1	R886
Osa01LNT0028400.1	1	nan	Morphological trait	Seed	CDO118	CDO455
Osa01LNT0028400.1	1	rfw1b	Resistance or Tolerance	Drought tolerance	C813	C955
Osa01LNT0028400.1	1	nan	Resistance or Tolerance	Drought tolerance	RM129	RM5
Osa01LNT0028400.1	1	brt1d	Resistance or Tolerance	Drought tolerance	C742	C904

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus