© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0028500.2
CTTCAAAAGAATCACTGATGCTTTACTATTGAATTGATATTCTTTTTCAGTCAAGAATGGCCAGAAAATGCTTTCTACGACTGCATATATTTACATAGGTACCAAAAATCAACATCAAGGCTATATAGTTTGGATCTCTCGTTCTGCCAAAATTAGATTTTATTAAAACAAATTTTAGAGCCTAACAACATGTAATTTTGTTCAGATCACATATCAAAACCGCTCTCCACAACGCTATTCACAGTTTTGTTATCGATCATTTTTTATCATTAGGCTTTGAAATTTGTTTAATAAAATATAATTTTGGTAAAACTAGAAAATCAAAAATCCAATTTATTGTCCCCTACATCCCGAGCTATCGCTCTTCGGAATTGAATTTGTTCCATGCCTCCTTAAGAAGATCAAACACCTTCTCACAAATATATTTCTGTCTGATTGTAGCACCCCTTTGTTGTAGTTTATCGGGATGGACACAAAGGGTTGCCCTTCTATATGCTTTCTTGACAGCAGTTGCTGTAATGAGATCTGTGAGGGGAACCGATTGCCAACCATTATCTGAACCAAGGATATATTGCAATGTAGATAGCAATGCTCGCAGATTTCCTTCCTTTCCATTTGACCATCTCTTGACTTCGGGGTCAAGGTATTCAGCTAATCTATGTCTCTCTGCTTGCTCTCTCTGAGCCAGCATGTCCCGCATATTCTTTTCAGCTAGAGCTTTGGCCGCTCGCTCAGCTGTGCGATGTTCCCTCTCAGATCTTGCTTTATGTCTCAGAGCTGACTCAAACTCAACTACTTGATTACTAGAATCCGTGCTTCTTTCATAGTTATTAGAAGCTGTCTTCTGAAACTGTTTGTCCAGTTGATTATCCTGATTAGTAGACTTGAAACTGTCCTTGAAGGAGGATCTAAATCTTTCCATTCGCTCCTTTGCATCTGCAGCAGCTTTTGCCTTTTCAATTGCTCTCTCCCGAGCTTCAGCAGTTGCTCTCTCAACTGCTGCACGTTCTGCCTTTAGTCTAGCTTCTCTAGAAGCCTTCTCAGTAGCTGCTTCAGCAGTTGCCTTCTCCTCTTTCTCTCGAGCTTCTGCAGATGCTCGTTGACGTGCTAAGGTAATCCTTTCCAATGCTATTCTTTCAGCCTTTGCACGGGCCTCAGCAAATGCTCTCTCATGTGCTTCTTTCGTAGCTCTCTGAACAGCAAGTCTATCTTTTGCTCGCTCTCTCTCCCGTTCCTTCTCTTCTTCTAATTCTCTTCTTGACCTCTCTTTAGCTTGTTCCTTTTCTCTTTCCATTTTGTATATTTCTTTGTCTTCATCTAGTCTATGCAAGACCTCCTTCTCAGTTTCTCTCAGTGTCTTTTTCACATTTTCCCTCCCTTCAATTCTCTGACCATCAGGGGTCTCATCTATCAATTTCTGGACAAAATTCAATGTAGTGTTCTCTGTAAATTTAGGTACAATGTAGCTGTCCAAATGAAAATATTTCTGATCCTTTACATTTAATTTTGACTGTTTATCTTTGTCATCTCCTTCCATTTTACTTCCAATAGCTTGCCCTTGTTCCAGTGCTGTACTATTTTCTTCTGGAAATTCTCTTTCTCTGCAATCCTCTCCAAGGTTTTCAAGAGGGGTGCTCTTATCAGATGTCTGAGCAGCAATAGACTTGTCAATCTGAGACAAGTGCTGCATGCTAGCAGATGACTCTAAAAATGAAGCACTCAGTTCTTTTGAGCATGTGCTCATCTTCGTGTTAAAATCAGTGCCATCATCAATAATAACTTTAGTTTCAGAATCATTACCATTTCCATCATTTATTGCATTAACTCCTGCATATGCATCATTTGGTCCTCCATCGATACCACCTTCGACAGATAGCTGGCCCTCTTCATGGCTGAAAATTTCTTCCACCTGTGACTTCTCGCTATTATCTAACCAGGGATCTTTTGCTGCTTCTTCATTACCATGAGATACAAGATCCCCCATTCCGTCCATTCTGTTTTCAGAGTCTTGTATCTGATCTGAATCTTCAACAGAAGTACCATATGTACTAACATGGGTTTCCATCACATTAATGCCCTCCACAAATGCATTCGCTTCTTCTGCTTCTTCATTTTCATTAGCACTAGCACTTTCCAAAGTAATGTTAGCTTCCCTTTCCAGAGATCCAGATTTTTGAACCACATCTCCTTCCAAAGTAATATAAGCTTTCTCCTCAGTTCCAAATTTCTTAATTTCTTTGTGGATGAGTGATTCTGGAGGTGCTTCAGTTATTCCTATGTTCTTATTCTGCGGGCGTAATTCATCAGAAAAACTAAACATCTTTTCTTTCTCAACAGTTTCGGTCTCTCCATGAGCTGTACTCGAACTTTTCTGGAAATTTGGGGTTTCATAATATTCCACCGACTCTTCTAATTTTGATACTTTCACTTGACTTGCCTTCTTTTCATCAATATTTTCATTACGAAATTCATGATATTCCTGTAATATTTGGCTCTGCATCTCATCAGCACATGGAACCTCAAGTGCCTCTATATTGTTGTTTTCTTTGTTAGATTCTCCTAATGATGTTGTTTCCTTAGTACTAGCATCAGAAGGACTTTTATTACCATTGCAGTGACCTCCAGATATACAAGACTCCAAAGATGCACCGGGTATTTCTGGAGCATGTAGCTTTGAACTATCCACACATGAAATCTCAAATGCCCCATCATCACCATATCGTTCTTGATAATTTTGTGCCCCCACACATTCTTTGAAATGGGTCTCAGTTGACTCTTGGTATGTGGGTTTTTCATTGCTAAAAGAAATTTCTGGAGCAGTAGGAGCCTTGCATCCATCCTCCGTAGAACCTATAGCATATTCTCTCAAATTTACATGTTCCATTCTCAACTCTGCTATGTCACCACCATCCCATGATTTTCCACACCCTACAAAATCCCCTGAAGTGGTTTCTCCTTTTCCTTTCTCAAACTGGCCGAGCTTGCTGGAGGGATTTGTTGTCTGAACATTATCTCCTTCACATGTAACTGAGTTAGTTTTGCATTTCTGGTCAGGGCTAATCAGTACATAAAATTCAGCACCTGATGTCCACTTTCCTAGTTGTTCTAGTTTAGAGCCACTTTGCGCTGTATGCTGAGGCTTCCTTGGTTGTAGAACCCCTTTTTCATTGTGATCACAGTGAGTTAAGTTAACTGCACTGCTGTCTCCATTCTTATTCACCAAAGCTGTCTCCTCATAGGTCTTTTCCTCTTTCACTATCCTTCTCATGGTCAGCTTTTCATCATAAACACGCACCTCTTCAGGTGCCATACTTTCCTTAAGTTCTGTCGATTTTGTGCCTCTATGATGACCTGGCTTCTTTCGAAGTTTAAAACTGTCACCTTTTCTCTCCATCAATTCTTTGGCAGCTTTTAACCGAGCTTCAGCAAACTCCATTGCTTCTTTGATAGCAGCAGCAGCAGCAGCTGAGTTAGTACTGACTTCAGAATCTCCATTTGCTTTACTTTCCTTTTTATTAAGCAATTTGGATGGTGGCTGTACTTTGATGGGTTGTGTGTGAAGGCTGTTATTTGGGACCCTTAAGAATGGGTAGTCAGGGGAAGGTACGTCCTCACTTGATGCTGAATGGGTGCTTAACCTCTTGTGGTAATCTTCATCTTCACAATCAGTCTTAGAAATGGGATGACATGTTGGTGTGTGCAGGTTCTGATCAGCCATAGGATCACTACTAGCACTCTTCACACTTGAACTTGATGGGAAAGTCAGGCCCGTGCTTCCTTTTTCACCATTTGCTTTACTTTCCTTTTTATTAAGCAATTTAGATGGTGCCAATAAAGGCGGCTGTACTTTGATGGGTTGTGTGTGAAGGCTGTTATTTGAGACCCTTAAGAATGGGTAGTCAGGGGAAGGTACTTCCTCACTTGATGCTGAATGGGTGCTTAACCTCTTGTGGTAATCTTCATCTTCACAATCATTCTTAGAAATTGGATGACATATTGGTGTGTGCAGGTTCTGATCAGCCACAGAATCACTACTAGCACTCTTCAGGCTTGAACTTGATGGAAAAGTCAGGCCCATGCTTCCTTTTTCACCATTTGCAAATGTATCACAGTCCACTACTACAACTTGATCCATTGCTGACTTGTTTGAAATATTGCGAGAGTCAACTACATAACTTATCGGAGGCTCCACCATACAAGTAGTCATTTTAACTATATCATCTGGTCTTCCCCTGGTAGCCTTGTTATATGACATACTAAACTGTTTCCCACTATCCGGAGGAGAGGAGATTGGAGAAAATTCGTCTTCATCAAAGTGTTGGTCATAACCTACAGTTGAATAGTGTTGATGGAGTATAGATGGATCAGCATCTAGTTGGCCAGATTCTTTTCTGACTGATGACCTCGAGCTCTCGCTCGACGACGCGATCTCCGCCGCCAACGCCACCGCCTCCGCCAGCAGGTCCTCGTACGGCTCCGCGAAGTCCCCGAAGTCGAACCGGCCGAAGATCTCGCCGTACGCCCCTGCCCCGGCGCCGTCGTCGCGGGCGGCGGCCGGGGGCAGGTCGAGGTAAGGGATGGAGCAGGAGGCCGCGACGCCGCCGAACACCTCCCCGTAGTCCGCCGGCACCCCGTCGAACGCCACGGCGAACTGCGGCGGCCCGCCGAACACGTCGCCGTACGCCGCCGCCGCGTCCGTCGACGACGCCTTCCTCCGGTGCCTCCGCCGCTCCCTGTGCCGCGGGGGCGCCGCCGCCGCCGCGAGCTCCTCCATCCTCTTCCTTCGCGGCGAATCGGAGAGCGCGCGAAGAGGAGAGGGGAGGGGAAGAGGAGCAGCGGCTGCACAGTGGCACGCGACGCGCCGCCGGCTTTAGAGTTTTTCGGGGGTCGAGGCCTCGGGGACTTTGGAGTTTGGGGGGTTTTGGCCGGGAACGTGATT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0028500.2 | 1 | 25424033 | A | C |
| Osa01LNT0028500.2 | 1 | 25424699 | A | T |
| Osa01LNT0028500.2 | 1 | 25418819 | A | G |
| Osa01LNT0028500.2 | 1 | 25419063 | C | T |
| Osa01LNT0028500.2 | 1 | 25419075 | A | G |
| Osa01LNT0028500.2 | 1 | 25419163 | C | T |
| Osa01LNT0028500.2 | 1 | 25419174 | G | A |
| Osa01LNT0028500.2 | 1 | 25419325 | C | T |
| Osa01LNT0028500.2 | 1 | 25420957 | T | C |
| Osa01LNT0028500.2 | 1 | 25421046 | A | T |
| Osa01LNT0028500.2 | 1 | 25421774 | A | T |
| Osa01LNT0028500.2 | 1 | 25421926 | A | G |
| Osa01LNT0028500.2 | 1 | 25422650 | T | A |
| Osa01LNT0028500.2 | 1 | 25423153 | G | A |
| Osa01LNT0028500.2 | 1 | 25423569 | C | T |
| Osa01LNT0028500.2 | 1 | 25425593 | G | A |
| Osa01LNT0028500.2 | 1 | 25423585 | A | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0028500.2 | osa-miR5831 | Translation | 5.0 | 6.582 | 1 | 24 |
| Osa01LNT0028500.2 | osa-miR5831 | Translation | 5.0 | 7.901 | 1 | 24 |
| Osa01LNT0028500.2 | osa-miR6253 | Cleavage | 4.5 | 13.765 | 1 | 22 |
| Osa01LNT0028500.2 | osa-miR6253 | Translation | 5.0 | 17.384 | 1 | 22 |
| Osa01LNT0028500.2 | osa-miR6253 | Translation | 5.0 | 15.392 | 1 | 22 |
| Osa01LNT0028500.2 | osa-miR164a | Cleavage | 4.0 | 9.721 | 1 | 21 |
| Osa01LNT0028500.2 | osa-miR164b | Cleavage | 4.0 | 9.721 | 1 | 21 |
| Osa01LNT0028500.2 | osa-miR396c-3p | Cleavage | 4.5 | 23.266 | 1 | 21 |
| Osa01LNT0028500.2 | osa-miR164c | Cleavage | 4.0 | 9.721 | 1 | 21 |
| Osa01LNT0028500.2 | osa-miR164e | Cleavage | 4.0 | 9.721 | 1 | 21 |
| Osa01LNT0028500.2 | osa-miR164f | Cleavage | 4.0 | 9.721 | 1 | 21 |
| Osa01LNT0028500.2 | osa-miR530-3p | Translation | 4.5 | 12.959 | 1 | 21 |
| Osa01LNT0028500.2 | osa-miR530-3p | Cleavage | 5.0 | 10.267 | 1 | 21 |
| Osa01LNT0028500.2 | osa-miR815a | Cleavage | 4.0 | 12.158 | 1 | 21 |
| Osa01LNT0028500.2 | osa-miR815a | Translation | 5.0 | 12.829 | 1 | 21 |
| Osa01LNT0028500.2 | osa-miR815b | Cleavage | 4.0 | 12.158 | 1 | 21 |
| Osa01LNT0028500.2 | osa-miR815b | Translation | 5.0 | 12.829 | 1 | 21 |
| Osa01LNT0028500.2 | osa-miR815c | Cleavage | 4.0 | 12.158 | 1 | 21 |
| Osa01LNT0028500.2 | osa-miR815c | Translation | 5.0 | 12.829 | 1 | 21 |
| Osa01LNT0028500.2 | osa-miR529b | Translation | 3.5 | 18.581 | 1 | 21 |
| Osa01LNT0028500.2 | osa-miR529b | Translation | 3.5 | 10.573 | 1 | 21 |
| Osa01LNT0028500.2 | osa-miR529b | Cleavage | 5.0 | 14.963 | 1 | 21 |
| Osa01LNT0028500.2 | osa-miR529b | Cleavage | 5.0 | 13.438 | 1 | 21 |
| Osa01LNT0028500.2 | osa-miR1857-3p | Translation | 4.5 | 19.872 | 1 | 21 |
| Osa01LNT0028500.2 | osa-miR1870-3p | Translation | 5.0 | 19.51 | 1 | 24 |
| Osa01LNT0028500.2 | osa-miR1870-3p | Translation | 5.0 | 20.547 | 1 | 24 |
| Osa01LNT0028500.2 | osa-miR1883a | Translation | 5.0 | 11.277 | 1 | 24 |
| Osa01LNT0028500.2 | osa-miR1883b | Translation | 5.0 | 11.277 | 1 | 24 |
| Osa01LNT0028500.2 | osa-miR2870 | Translation | 4.0 | 17.501 | 1 | 21 |
| Osa01LNT0028500.2 | osa-miR2872 | Cleavage | 4.5 | 18.349 | 1 | 21 |
| Osa01LNT0028500.2 | osa-miR2907a | Translation | 4.5 | 22.172 | 1 | 22 |
| Osa01LNT0028500.2 | osa-miR2907b | Translation | 4.5 | 22.172 | 1 | 22 |
| Osa01LNT0028500.2 | osa-miR2907c | Translation | 4.5 | 22.172 | 1 | 22 |
| Osa01LNT0028500.2 | osa-miR2907d | Translation | 4.5 | 22.172 | 1 | 22 |
| Osa01LNT0028500.2 | osa-miR2923 | Translation | 4.5 | 5.323 | 1 | 22 |
| Osa01LNT0028500.2 | osa-miR812k | Cleavage | 4.5 | 7.517 | 1 | 24 |
| Osa01LNT0028500.2 | osa-miR812l | Cleavage | 4.5 | 7.517 | 1 | 24 |
| Osa01LNT0028500.2 | osa-miR812m | Cleavage | 4.5 | 7.517 | 1 | 24 |
| Osa01LNT0028500.2 | osa-miR5161 | Cleavage | 4.5 | 16.186 | 1 | 20 |
| Osa01LNT0028500.2 | osa-miR5497 | Translation | 4.0 | 20.185 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0028500.2 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0028500.2 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0028500.2 | 1 | nan | Resistance or Tolerance | Drought tolerance | RM129 | RM5 |
| Osa01LNT0028500.2 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Osa01LNT0028500.2 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0028500.2 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0028500.2 | 1 | nan | Morphological trait | Seed | CDO118 | CDO455 |
| Osa01LNT0028500.2 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0028500.2 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)