© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0317400.1
CGTGCAACTCTGTGCTGGGAAAGTATCGAAACATACGGTTGAAACATGCTACATCGTGTAAGGTATAACCTCTGTCCGAATCATAACAACATTCCAACAAAAGCTCAAAGCGGCACAACAAGGAGACACGAACCTCAAAGATCAAACAACCCTATACCCTGGCGACGGTGGCAAAAGGGAGAACTTGAAGTAAGAAGAAATGTGCAATTAAATTCCTATGGTGTCACCTAGGGTTCATTCCGACGCCGTGTAGTTAATAGCGGATAATATCACTCAAGATGCTAAAGAAGTGGTTGATATCTATCTTTTCCTCTCCACCATAGACTGCTTCCGCGCTTCCTCCTGATGGCCCTTGTGCAGCCATCTCAACGAGTGTGTACAGCTTCTTGATTGGCATATCGTCCAGTGCTTCTGCAGCCGCATCAATGTCCGCTTCATCGAACACATTGAGATGCCGCAACACCTTTGTAGCATCCTCCTTTTTCAGTTTGGGGACATGGTATGTCACGGAGAACACGTCGCACATACCAATGGATTCTAGAAAGCCTACTTCACTTGTTGTTCCAATAACAAGCAAGTTCTTGCCCTTAGGAGGAACCCTCTTGAGAAGGACTAGTAGAGTTTGTGAGATTATGTTTGAAAAGCGTGGTCCAATGGCAACATATTCCAGTAACCTTTCGATGTCATCTAGAATTATGATGCCAAACTGAGATTTGTATGCATCCTCAAAAACCTTGCAAATCTGTGCACATTTGCTGCTTTCACTGAAACCAATCATTGTCTCTGCTGATATAATTTTGACGTAAGCAAAATCACTGTCAATGCCAACAGTAGCAGCCAAAGCCGATTTACCACTTCCAGCAGGACCTTCCAAGAGGCATGTCACAAGTGGACTACCTTTGCTAACTTTAACTTGCTCAACAAGAAGCATACCTCTCTCATACAAGTGCCTATGTGCCTTGCCACAATCAACCATACCCCTTAGCCTGCATCTTTCAAGGTCATCAGTGGAAGCACCAAATGCAGGGGTAATTTCATGAAGTGCATTCACAAAATCATCCATAGTAACCTTAATGCTTTCTTCATCCAAAGGCTTGGTAAGGTCATCCATGCTTATCTGCCTGTTCAAAGCATATGAGACTGCACTTTTGACGACACCTTCCAGCTCTGCTCCACTGTAGTTCTTTGTCCGTGCAGCTAGCTCCTGAAGATTAACATTCGGGGAAAGGAAAGAGCTTTCTTTCATCTTATTCGTATGAATTTGAAGAATCTGCAAACGGCCATTTTCATCAGGCAGGTTTATCTCAATATGAACTTCCAATCGTCCAGGCCTCAGTAAAGCTTCATCAAGTAAATCCTTACGATTGGTCATTCCAATGAGGAGCACATTATTCAATGCCTCAACACCATCTATCTTTGTAAGGAGCTGATTTACAATGCTATCATGTACACCCGTACCATCTCTGGTAGATCCTCTAGACTTGCAGATAGCATCAATTTCATCGAAAATGATAACGTGGAGGTCACTCTGATCACCTCGTGTCTTCTGGTCATTTTCAGCATCAGCGAACAAATCTCTCACATTCTTCTCAGTTTCTCCAACAAACTTGCTCAAGACTTCAGGTCCATTTACAATCTTGGGTTCATTTCCGTTCAGCAGTTTCCCAATTTGACGGGCCATAAGAGTTTTGCCAGTACCAGGGGGGCCATACAGCAATATACCTTTAACATGCTTGATGCCCAATTTATTAACAACATGAGGAGGAAACACCCTTGAAGCAAATGCCCTTCTAAATATGTCTGTGAATTCAGCACTTAATCCACCTATCCCCAACTTTTCAAGGTTAAACTCTTTGTGCTTGAAAAGCTTGCTGCTAGCAGCTTCCTTTTGGTTTACTACCTTAATTCCTGAATTAGGCGCAGCCTCAAATATGATGTATGTATCACTTGACAGGAATCCTCTGTCCAAAGGTGTGGAATTTTCTTGGCCATCTAGCAAAGCTTGATTGACAGTGAATATATAGTTTGTCCCACAAAATTCAAATGGTACTCTTTGCCCAGATGTCATGACCTGATCAAGAAATCTCCTTCGAAGTTGTTGGGCAAGCACAACAGCATCCAGCTCCTCATTTCGGTTGGTTCTTGCCTTGGTATACTCTAGTTCTAATGTGAGCAATGCCAATTTGAAATCATCGGGAGGGGCAAAACTGCTAACAGTGATTGAATCCCCAGCTGAAACCTTCGTCTGGCGACGCTGAATGGCATTCAATGCGATGCTTCCAGCAGAAACAGCATCATGGGCAGTGGATATTCATTAAGGATCACACATGAGAAGAGAAACTTATAATTCAATTGGGAAGTAGGCACGAAATATCATCAAAGCATCTCAAAGCTGAGACATCATGATCTCATCGAAGGTAGATTTGAGAGCAATAATAACTGGAAGCCACATTACGGTGAGCCCAGCAACCCCAGCACAGAACACTAAACTAAACATCAACACTGGAGGATAACAAATCACAATAACATTTGCGCTTAGGCACGCTACTAACCATCACACCAAGTCACCAACTGGTTTTCTCTACGTTCGTGGATTCATACGGGAACCACTACCAGACCAGATCAAAATCGCCAGAACGGGCTCATTTGGGGGGAGAGAGATCTAAGCGCGGGGGAGAGCACACGAACCGATTTGGTTACGAGATCGGCAAAAGGATATCGCAGGGTGAAGACGAAGGCGTCGCCGACGAGGGCGAGGGCGTTGGGGAAGCGGCGGATGTCGGCGGAGGAGACGTACGCGCAGTTGGTGAGGGCCAGCTCCTGCCCCGGCGTGCTCGCCACCACCATGGACATGCCCCCGCCGCCGCCGCCGCCGTAGCCGTGGTAGTTCCTCCCCGCCATGGCCGCGTCGCCGCAGCGGGGGTGAGATCTCGCGGGAGCAGAGAAAGGGGACGACGAGGACGAGGAGGACGACTCGCCCGCGCAGGAGAGATGCCGAAAGGAAAGGAAATGGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0317400.1 | 5 | 25782597 | G | A |
| Osa05LNT0317400.1 | 5 | 25783719 | A | G |
| Osa05LNT0317400.1 | 5 | 25785511 | G | T |
| Osa05LNT0317400.1 | 5 | 25782722 | T | G |
| Osa05LNT0317400.1 | 5 | 25786997 | G | A |
| Osa05LNT0317400.1 | 5 | 25787724 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0317400.1 | osa-miR159e | Cleavage | 4.5 | 17.648 | 1 | 21 |
| Osa05LNT0317400.1 | osa-miR169f.2 | Translation | 5.0 | 20.786 | 1 | 21 |
| Osa05LNT0317400.1 | osa-miR171c-5p | Cleavage | 4.5 | 19.459 | 1 | 21 |
| Osa05LNT0317400.1 | osa-miR166g-5p | Translation | 4.5 | 15.769 | 1 | 21 |
| Osa05LNT0317400.1 | osa-miR414 | Translation | 4.5 | 22.709 | 1 | 21 |
| Osa05LNT0317400.1 | osa-miR1876 | Cleavage | 5.0 | 17.974 | 1 | 24 |
| Osa05LNT0317400.1 | osa-miR2099-3p | Translation | 4.5 | 17.207 | 1 | 20 |
| Osa05LNT0317400.1 | osa-miR3979-5p | Cleavage | 4.0 | 18.139 | 1 | 20 |
| Osa05LNT0317400.1 | osa-miR5071 | Translation | 4.5 | 22.8 | 1 | 21 |
| Osa05LNT0317400.1 | osa-miR5519 | Cleavage | 5.0 | 15.051 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0317400.1 | 5 | qNBL-5 | Resistance or Tolerance | Blast resistance | RZ649 | RZ225 |
| Osa05LNT0317400.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0317400.1 | 5 | QFla5 | Morphological trait | Culm/leaf | RG470 | RG346 |
| Osa05LNT0317400.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0317400.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0317400.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Osa05LNT0317400.1 | 5 | qRFC-5 | Physiological trait | Eating quality | RG470 | RG474 |
| Osa05LNT0317400.1 | 5 | qRGR-5 | Physiological trait | Germination/dormancy | RM421 | RM480 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)