© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0317500.1
GCATGATATATTCTTTCTGGATCGTTTCAACAAAACTGGGTGACAAAATTTCAGTAAGGTGTGTACACACATCATCCAAGATCCAACAAGGAAAAGTACACCAGGCAACAAGGAAAATTTTCATGGTCGACGAGAGGGTCCATCTTTTGGGCAAAAAAAGCAACACACTGCCTGACGAAGCCTCAGGTCGACTCGCTCTTCGGCCGACGAGTTGTGGCGAGGACTGCAGCGCGGAGAATCGCGTCCAGTACAGATGGCCAGTACTCAGCTGGTGCCTGATGATGTGCTGCTGCTCAGTTAACACTTTCATTGTCAGCATTTCTCAACCATAACCTAATTCCTCGTCCCAGAAGAGCACAGATACTTCAACATGTACTCATTAGAAGAACAAGTGTCGGCCAAATCCTGATGAATTCTTGTTATAGACTTCTGAAACGACTTCAGAGCAGGAAGCAAGGCTCTGGAGTTTTGTTGAATATAGTTTCCGTGAATCTTGCATAGCTCCTGAGACCAGAGGAGAATAAATTCAAGATGGGGACAACTTTCCAAAAGGTCAGAAAATGCTTCGATTAATCTCTGAAGATACTTCAAGGGTGTTGATGAACAAATTGCTCGTACATTGGATGGATCCACTGAAAAAATGCACTTCTTGATCAAGGAGTCTTCATTTAACCGGAGGCTGAGTAGAAGGGCTCTTTGCTGTTGGTTTTCCTCAAGAGCTTCTTCCACTTTCTCAGGGGTAACATCAATGTCAAGATCTGTTGGATCAAAAATAAAAGAATCATCAACAGAGTACAATAGAACACCATCAGTGGTTGCTGCAGCGAAAGATCTTCCTGTTGGAGCAAATTTCACGCATTTTGTCCGAGCTATGGGCCTTCCACGATTTGCCATGGAACCAGGCAAACCAAGCCCCAAGTTGCCTCTTGTTTGTTGATCGATCCCCTCCTCAACATCACTATCCTCATCATCAATCAGATCTAGTGCACCAGCATCCGTCATCTTCTTTGAGTTCAGAAAATCAAGTACTCCGTCCAACGAGAGATTGCGGGTGATCTGGAATCTACGCAAGAGCACCTGTTCTCCAACATCATACATGCATATATATTTGCTGTTTCCTCCAGCTAAAATATAAGTCCCGTCAGCAGAATAGCACAACGTTGTGAAGTACTTTCCTATACTTGTATTAGCAGCAGATCTTCTGTCAGTCATGAGACGACCCCCGGCAATATCCCTGCGGCCTTCAATTGTATACATCAACAGGCCGTCAAATGGATCCCAGAAATGGATTAAGCCATCTAGTGTGCTGCATGCTATCTGTCTTCCATCAGGGCGATAAGCCAAAGTAAGAACATCATGTGAATGTTGAAAAGTTTCCACTGCACCCTTGCTCTCAAATACGTCCCAAAGGCGAACTGTTTTGTCCCATGATGATGAAGCCAAAATAGCATTGATTGGCGAAAACATTAGGCCATGAACTGGTCCTTGGTGACCACTGAGTATATCCAACAAACGACCAGTCTTCATTGACCAAACAAATATCTCAAATGAATCAAGTGTTCCAGCACATATTACTTCTCCACTCTGATCTGCCGTTAAAGAAACAAATTGTCTGGGCAATGCAGTAGTAAATGTCTTGAAATTTCGATAGCGGAACAGATCCCATGCTCGAATAGTCCCATCAAGGGAGGCACTGAGAAGAGAATGATTATTGGCCATAAAATGAACTGCAGTAACAGCGTTTGTATGCTCCGAAAATGTTATGAAACAGAACCCAGAGGAGACTGTCCAGACCTTGACTTTGTTATCATCAGCTCCAGTGGCCAGTAATTGGGAGTCTGGTGAGTATGCAATGCAGTTCACATCAAAGTAGTGCCCCTGCTGCTTCAAAATGTAGCTCTCTGATCGCCACTCCCACACCAGTAATTGCCCAAGTTTGGCACATCCAAAAACTAACCAATTCCCCAAACTGTTGAAAATAGCAGTAGTGATCTTCTCCCTTGATATTGACAGTAAGTGGAGGCACACAAAGTCTGGCATCTGGTACAGCCCAAATACACCATTAGAGAAACCAACCACCACCATGTCAAGCTCCCTATGGTAATCACAGGCTGTTAACTTAGCCGGTGACTGCATGAAGAAGTCCTTTTTCTGCAGCTCCCACCTTGTGAAATGCAGCGGGGTAGTGTCTGGTTCTTCCGATTCTCCGAAACTCTTCCTTTTCCTGCTCCCGCCATCCAATTCGGGCTCGTCACCGTCCAATTCAGCCTCACCATCCTGTACCGCCTCCTGCTCTGGCGTCCCTGGTGAAGGTGGAGGCGAATCATCACTTCCTTCCACCAAATTCCATGTAAAGATAGCTCCGTCCTTGGTAATTGTGTAAGCCCCAGTGACTCTCCCTGTCTTCTTATCTGTGGCGAAGAAGGCGCCAACCACGGCGGCGCGGTGGCCAACGAAGAGGAATGGTTTGCCTCCAAGGCCTTTCTTGACAGGCAAGAGGCGGGCGGTGAGGTCCTTGCAGGAGGCGAGGAGGAACGAGGAGTCGGGAGACCAGTCGAAGGCGGTGACACCGGCGGCGAAGCCAGGGATGGTGCGGAGCAGGTGGAAAGGGAAGAACTCCTTGCGGAACGCGGGCGAGCGCCAGATCTGGACGAGCTTACCGACGGCGACGGCGATGAGGTTGCCGTCGGGGCTGAAGCGGACGGCGGAGGGGGCGGACTTGAAGGCGATCCGGTGGAGGACGGCGCGGCGGCCGAGGTTGGCGTAGAGCGCGCGGCCGGCGTCGTCGACGGAGAGGAGGAAGTCGCCCGAGGGGGAGACGGCGAGGCGGGTGACGTTGGAGGAGGACTCGAAGGGGAGCGTGAGGGAGGAGGAGGCGGAGAGGTCGGTGGACGCGACGCGGTTGCCGACGGCGGAGAGGAGGACGGAGGAGTCACCGGCGAAGACGGCGTCGCCGCCGCGGTACGGCGCGCCCAGGAGGTTGTGGAAGCGGTAGTTCAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0317500.1 | 5 | 25790448 | A | G |
| Osa05LNT0317500.1 | 5 | 25790499 | T | C |
| Osa05LNT0317500.1 | 5 | 25791523 | T | C |
| Osa05LNT0317500.1 | 5 | 25792863 | G | C |
| Osa05LNT0317500.1 | 5 | 25792867 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0317500.1 | osa-miR5539a | Cleavage | 5.0 | 15.827 | 1 | 22 |
| Osa05LNT0317500.1 | osa-miR5820 | Cleavage | 5.0 | 15.163 | 1 | 21 |
| Osa05LNT0317500.1 | osa-miR6247 | Translation | 4.0 | 17.696 | 1 | 21 |
| Osa05LNT0317500.1 | osa-miR5539b | Cleavage | 5.0 | 15.827 | 1 | 22 |
| Osa05LNT0317500.1 | osa-miR395u | Cleavage | 5.0 | 21.971 | 1 | 21 |
| Osa05LNT0317500.1 | osa-miR396a-3p | Cleavage | 5.0 | 20.497 | 1 | 20 |
| Osa05LNT0317500.1 | osa-miR396b-3p | Cleavage | 5.0 | 20.497 | 1 | 20 |
| Osa05LNT0317500.1 | osa-miR408-3p | Translation | 4.5 | 24.127 | 1 | 21 |
| Osa05LNT0317500.1 | osa-miR419 | Cleavage | 3.5 | 10.998 | 1 | 21 |
| Osa05LNT0317500.1 | osa-miR426 | Translation | 2.5 | 16.025 | 1 | 21 |
| Osa05LNT0317500.1 | osa-miR1882a | Cleavage | 5.0 | 20.073 | 1 | 24 |
| Osa05LNT0317500.1 | osa-miR1882b | Cleavage | 5.0 | 20.073 | 1 | 24 |
| Osa05LNT0317500.1 | osa-miR1882c | Cleavage | 5.0 | 20.073 | 1 | 24 |
| Osa05LNT0317500.1 | osa-miR1882d | Cleavage | 5.0 | 20.073 | 1 | 24 |
| Osa05LNT0317500.1 | osa-miR1882e-5p | Cleavage | 5.0 | 20.073 | 1 | 24 |
| Osa05LNT0317500.1 | osa-miR1882f | Cleavage | 5.0 | 20.073 | 1 | 24 |
| Osa05LNT0317500.1 | osa-miR1882g | Cleavage | 5.0 | 20.073 | 1 | 24 |
| Osa05LNT0317500.1 | osa-miR1882h | Cleavage | 5.0 | 20.073 | 1 | 24 |
| Osa05LNT0317500.1 | osa-miR2096-5p | Cleavage | 4.0 | 19.654 | 1 | 21 |
| Osa05LNT0317500.1 | osa-miR2097-3p | Translation | 4.0 | 14.118 | 1 | 22 |
| Osa05LNT0317500.1 | osa-miR2118e | Cleavage | 5.0 | 14.356 | 1 | 22 |
| Osa05LNT0317500.1 | osa-miR2118r | Cleavage | 5.0 | 14.356 | 1 | 22 |
| Osa05LNT0317500.1 | osa-miR2931 | Cleavage | 4.5 | 16.078 | 1 | 20 |
| Osa05LNT0317500.1 | osa-miR5486 | Cleavage | 5.0 | 12.488 | 1 | 21 |
| Osa05LNT0317500.1 | osa-miR5491 | Cleavage | 4.5 | 17.857 | 1 | 21 |
| Osa05LNT0317500.1 | osa-miR5498 | Cleavage | 4.5 | 8.006 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0317500.1 | 5 | qNBL-5 | Resistance or Tolerance | Blast resistance | RZ649 | RZ225 |
| Osa05LNT0317500.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0317500.1 | 5 | QFla5 | Morphological trait | Culm/leaf | RG470 | RG346 |
| Osa05LNT0317500.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0317500.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0317500.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Osa05LNT0317500.1 | 5 | qRFC-5 | Physiological trait | Eating quality | RG470 | RG474 |
| Osa05LNT0317500.1 | 5 | qRGR-5 | Physiological trait | Germination/dormancy | RM421 | RM480 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)