© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0317800.1
CACACAACAAAAGATCACTGTTTACTGCATCTTTTCTTTCCAATACACAATCCACAAGCCAAACATGTACAGACAGAAGGTTAACGTAAGAACAAGGCCTTTGCTACAAGGATTACATGATTACATCATCTGTATGTGTGTAAAACCATCCCTAAAACAATGCACGTTGTACACTCCCGGCACAACAAAAAAACAAGCTTGAATGTAATCTGAGCCACCAATCTGGACCCAATCACTACCAACCTACACTACTTACAAAAATCACACTATATTTGTTTGTTTCCCATCTCTGTATATAATTACAAAGTTAGAGCAAATCTTGTAGCCTGACCACTCAGCTGCACGCAATATACAATTAATTAGCCTTGTGCTCATGGTAGCCTTCTATGTCCTACACCAGATTATAGTCGAAAACCAAATCCAAATCCAGGAGATCAACATGTTACGAGCAATCACCTCGCCGATGCACTTGGAAGTTGGAACCTATGTTTCCCCATGATTGATGTCCTATATATTTTGTACCAGATGATCCCCAAAACTCTTATCTTGGCACTCTTATTGTATCTTCTGAGTATCTCAAGCAAGAAGTGTACAGTGCAAACTGGCCGTAGCCAGGAGGGTGCGTTGTGATAGCACCTCTATGCTTCTCGCCCTTGCTATTAATTCCATTGTGAACAAGGCATCGTGTAAAAGAAAAGGTGTCATACAAGTAGCACAATCTTCTATTATTTCCCTATTTGGCATTTACCTGATTTTAGAAATGCTCCTTGTGAAACTCAAATTTTGACGTGCATCTGCCATTAAAATCATGGCAAAGATCGCTTAATTCCTGAGCCAGAACTGGAGCCCCACAGTAGAATACTCCTATTTTAGCATAAGGATGTTTGGAGGCTATCTTAGAAAGAACCTTCTTAAAATTTGGCCTTGCAAAATGTGTACGGACTTTAGTTCCAGATACTATATCAACACCATTCTTGGCATGGTTTAGAGCTTGCAGCATAGTAATGAGTGCTGACCGAGCATCCCCTTCCTCGTAAACACTTGTGAGGTAGTTGTGCATCTCAATAATATTCCTTTGATCTAGTTCAGCAATCTCATTCATGACTCCTTTAAACCAATCAAAAGAGCCTTGTTCACGTGTCACCCAATAAAAATAAGCATTTGTTGTCTTCAAAACCCTCTTTGGTTTTGAGGTAATCCTCATAAGGGTGTCAAGATCAACATGTGCTTTATTGCGTCCGATTGGCGGGTAAAGATCACCTGAAGCTTCTTCCTCTTCCTCCATTTTGATGATGCTGTTGATAAGGTCTTTCAATATGCTGATAAAAGGCGTTGCGCCAATTCCTAATCCAACCAGCAGTAAAACATCATACTTGCTGTAGTCTTGCGCAGGAGAGCCATATGGACCATCAATCAACAATTTGGGTAAGGCTTTCTTGGTAGTCTCATCTGCTCTAAGGAGACCACTTTTCCCACCCACTGGTGGCTCACAAGCCGCTGAGAACACCCTCTTGAGCTCTCTTGTCCAGTCACCAAGTTGCCGAACATGAATGCTGAGATAGTCATCCCCAGGTGCCGAAGTTATTGAGAAGGGATGCCATTCAAAGGGTGAAACAGCTGGACATTGAACAAACATATACTGCCCACTCTTATAACGGAATGTGGGAGGCTTAGACATCTGCAGTGTTAAAACATTACCAGGATAGATGGCCACCTTCAACAGACGGACAGAATAACTGCCAGACCTGAAGAACCTCAGTGTCCTCTCCCCTACATACAAACAAACGGGCACTGCAAGATACATCCATGTCGTCCTTTTGTACCATATGCGGATAAGGTATAGCCACTCTCCATGAATTACAAGTGATATGTACACAATGATGAATAGATGGTGAGAATACCAGAAAGCGTTGAAGCCAGTTAATTTGTCAAATGGCTTTGGAAGCTTCACCAGGCTACGGCGGAACCACCTGGTTGCAAGAGTAAAAGCGATAATCATGCACACAAGCATGATTACCCCAGTTATGCCCTCCACTCCTTTGACCAGGGTCAAATATGTTGGCTTAGTTTCACCAAAATACTTCCCTAGTGGAGCATACTTCTCCTCCGATGAACCTATGAGCCGTGGAAAATCACATACAAGATGGAGCCCTCCATGAAGGATAACACCAACCACAATTGCTGCTGCAATAGTCTTGTGGAAGTTGATGTTGTCATCGAACGGCAATGCCCGTGCAGCCCTTGTATTCCTCAACCAAGTGATGGTGTTGCGGCATACTGGCAGGAGGATAATAGCCATATTCAGCTTAAGAGTCTCAGCAGCCCCTTTTGCAGTTGTTACACAGTAGCCCATCACGTTAAAGACATATCGGTGGCGGTATTGTATGAATTTCCAAATGAACAACCCAGCCATTATCCCAATCCACAGTGCAAGTACCCACAGGCGCTTCCAGTTGTCCTCCAGATAGTAGCTTAATTTGGTGCTTATTTTCCGGATTGGACTCCTTTTCCTTAGACCAGCAAGGTTCTGGCTTAGTGCCTGGCTTGTGTAGCTCAATGCTTGGCTATAGTTCACATAGGTATCTTTTTGCAATAGCAATGTCTCCAATTGCCAGAGCTCAATGTAGCCAAGCTGTTCGGGATCAAGTTCCTCCATGATCAAGGCCGCATATTCCTCTGCTTGCTCCTTGAGTCTTGACAGTTTATTAGCAGAAGCACTTAACATAATAATCTCTTTCACCTCAGCCTCCGTAATATGGCCATCTGCGTTCTTATCCACCATATCGAAGAAGATCTGGAGGCGCGAGTCGAAGCTGTTGTCGGTGATCTGCTGCCAGATCTCGCGCAGTTCTTCCTTGTTGATCTTGTCCACCTGCATCTGCCGCCGCCGGCTCAAGGTGTCGAACAGCTCCATGGCGAACTCCTTCGACTCCGTCATCCCTATGCATTGCGGGAAATCGTCGCGGGAGAGGTAGCCGTCGCGGGCGAGGCGGTCGAAGTTGGCCTGGACTTCGATCCACGCGTTGCTGGCCTTGTTGGGGCCGCTGATGAAGCGGAGGCCGCGGATCGCCCGCTGCGCGCCGGACTTGGTGCGGTCGAGCTGCGCGCGCTGCCGGCGCTCCGCGCGGGCCGCGAGGGCGGACTCGATGCCCGGCGGGGCGGTGGTGGTGCTCTGGGTGCGCGTGAAGCGCTTGGTGAGGTCCTGCGAGAACTGGCGCGCGCGGGCCATGGCCTCGGCCTTGAGCTCCTGCGAGAACTGCAGCAGCCGGTGCGACGACGTCCGCCGCATCGCCGGCGACCTCGACCGCGACGCCACCCCGCCAGGCGGCTCCGCCCGCCTCGGCGGCGCCACCGCTGACGGCGACGCACCCGACGACGACGCCACGGCCGCTCCCCCCGCCGCCGGCTCGACGCTCCTCAGCACAATGGTGTCGTCCTCCTGCAGGTCGAGCGTCACCTCGACCAGCTCCTCCCCGTCGTCGGAGCTCCGGTCCGACCCGCGCGGCGACGACCCCGTGCTCAGCGACCGCGGCGTCGTCACACCAGACCCCCATCGCGGCCGCACCGGCGTAGTGCCGCCGCCGCTGCCGCTGCCGATTCCCGCCCTCATCACTCCCCCTCCTCCCCTCCTCGCACGCACGCAATGCGCCGCTCCCTTGGCTGGCTGGCTGGCTGGCTGCAGCTAGCCCACCACCAAAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0317800.1 | 5 | 26244358 | A | C |
| Osa05LNT0317800.1 | 5 | 26244533 | G | A |
| Osa05LNT0317800.1 | 5 | 26239435 | C | G |
| Osa05LNT0317800.1 | 5 | 26241264 | A | C |
| Osa05LNT0317800.1 | 5 | 26241470 | A | G |
| Osa05LNT0317800.1 | 5 | 26244821 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0317800.1 | osa-miR5543 | Cleavage | 4.0 | 20.047 | 1 | 21 |
| Osa05LNT0317800.1 | osa-miR393a | Cleavage | 5.0 | 14.895 | 1 | 21 |
| Osa05LNT0317800.1 | osa-miR399e | Cleavage | 5.0 | 14.281 | 1 | 21 |
| Osa05LNT0317800.1 | osa-miR399f | Cleavage | 5.0 | 14.281 | 1 | 21 |
| Osa05LNT0317800.1 | osa-miR399g | Cleavage | 5.0 | 14.281 | 1 | 21 |
| Osa05LNT0317800.1 | osa-miR399h | Cleavage | 4.5 | 14.281 | 1 | 21 |
| Osa05LNT0317800.1 | osa-miR393b-5p | Cleavage | 5.0 | 14.895 | 1 | 22 |
| Osa05LNT0317800.1 | osa-miR395v | Cleavage | 5.0 | 19.667 | 1 | 21 |
| Osa05LNT0317800.1 | osa-miR1428a-5p | Cleavage | 5.0 | 16.799 | 1 | 21 |
| Osa05LNT0317800.1 | osa-miR1857-5p | Cleavage | 5.0 | 15.217 | 1 | 21 |
| Osa05LNT0317800.1 | osa-miR1870-5p | Cleavage | 4.0 | 12.177 | 1 | 24 |
| Osa05LNT0317800.1 | osa-miR1882a | Cleavage | 4.5 | 12.185 | 1 | 24 |
| Osa05LNT0317800.1 | osa-miR1882b | Cleavage | 4.5 | 12.185 | 1 | 24 |
| Osa05LNT0317800.1 | osa-miR1882c | Cleavage | 4.5 | 12.185 | 1 | 24 |
| Osa05LNT0317800.1 | osa-miR1882d | Cleavage | 4.5 | 12.185 | 1 | 24 |
| Osa05LNT0317800.1 | osa-miR1882e-5p | Cleavage | 4.5 | 12.185 | 1 | 24 |
| Osa05LNT0317800.1 | osa-miR1882f | Cleavage | 4.5 | 12.185 | 1 | 24 |
| Osa05LNT0317800.1 | osa-miR1882g | Cleavage | 4.5 | 12.185 | 1 | 24 |
| Osa05LNT0317800.1 | osa-miR1882h | Cleavage | 4.5 | 12.185 | 1 | 24 |
| Osa05LNT0317800.1 | osa-miR1320-5p | Cleavage | 4.0 | 17.964 | 1 | 21 |
| Osa05LNT0317800.1 | osa-miR1863b | Translation | 3.5 | 16.446 | 1 | 24 |
| Osa05LNT0317800.1 | osa-miR5340 | Cleavage | 3.5 | 13.487 | 1 | 23 |
| Osa05LNT0317800.1 | osa-miR5485 | Cleavage | 5.0 | 20.39 | 1 | 21 |
| Osa05LNT0317800.1 | osa-miR5489 | Cleavage | 4.5 | 22.328 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0317800.1 | 5 | qGT5-1 | Physiological trait | Eating quality | RM538 | RM480 |
| Osa05LNT0317800.1 | 5 | qRGR-5 | Physiological trait | Germination/dormancy | RM421 | RM480 |
| Osa05LNT0317800.1 | 5 | QFla5 | Morphological trait | Culm/leaf | RG470 | RG346 |
| Osa05LNT0317800.1 | 5 | qNBL-5 | Resistance or Tolerance | Blast resistance | RZ649 | RZ225 |
| Osa05LNT0317800.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0317800.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0317800.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0317800.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Osa05LNT0317800.1 | 5 | qRFC-5 | Physiological trait | Eating quality | RG470 | RG474 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)