© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0317900.1
ACCATTCTTATTTAAAAAATATAAATATAAACATTTAACCATTCGTATTGAGAGAGTTCGTTTTTTTTTAAAAAAATACCCCTAAAGTTCTAAAAATAATTAAAAAAATTGCCACGTGAACCACAGGGCCAAATTGGTAGGCCCATTTAGGGACTGAATTTTGGGTCGCTCCCTAAATGGGCCGGGCTAACATAATGGACCAGGTTTGGCCGGGCCAAACGTTTATTATATTCCCCTTCATTTACCCCCTCCTCATCCTGCTCTCTACAAACCACACAATTTTAATCCAACGCTGCAGACGAACCCAATGGGACATGAACACATGAACATCCCCGCTCGCATGATCATTGGACATAATCTGGGTTCTCCTTGTTCCAAGACAAGTAAGACGGGTCTCCAAGTGTCCTTGGCTTAACCATGTTGAGACCAACGAAGGCCAAGGCGATGAGGAAGGAGATGGTACCGATCGCCACATACGCGAAACCGATGAAATTGTTCTTGCCGCCGATCCAAGAAGTGGTAGAAAGAACCAGCGCCTTGGTGCCTCCAAAGCTGTACGTGTTGTAGTTGTTCTGAATCACCACTGTGATTTCATCGCTCGCCATTATATCCGTCTCGATTCTGCCGTAGAGCTTTCTGAATGTTGGGAGTGCAGCTGTTCTCATCCAGACAATGAGATCCTCTTGCTCACTCAATGGTAATTTCTCATTTAGCTGACCACCACCTATGAGCCCACCCTTCTGGAAATTTTCGGGGAAAACATCACTGCCAAACTTAATGGTCCTGTCACTGCTCCAAGCTATGTTCTTCTTGTTCACTTGGACAGTCTTCTTGTTGACAGAAAATGTGAAGGTGTCATTGAACAGGCTCCATGCTATGAGGCCACACGGAACAATAGGGGCTCCGCCTTCACTGATGGCTTCAGGATCACAAGTTTTTATCACACTTGAGAACTCCTTGGACCGCAGCTGTTTATCGCTCCGGCTCTTGACATATCGCCGATGGTTTTGGTAGAAGTTTTCCAGCTGGTAGTAAACTTGTATGGGGCCTTTCATAGGTTTTGGCACAGTAATCGTTCTGGTGCACGCTTTGTCAGTCTTGGTGTCCTGAATGAACCCGACCTTGTCGTTAGCCGTCACACACTCCCCATCATATTTATCCACCAATTCAACAACCTCCTGTGATGCTGCAATTGAAACGAGCCCTATCGGTATGAAGATGATGCCGATGAGCGAGAAGGCCCCGATGACAATTCCAGGAGTATATAGTGGTTTCCATGCCGGAAGCTCCTGCTGCGTGAACTTAGAATACTTGGGCTTCATGGATCGCTTTGCGGCCACCGAATCGCTCTCGGATCCTGATGTACTCATCTAGGACGTATATTATGTCTTATGTTTTTGGTTGGATCCAATCACGCAGGGAGATCGTCTCCTTCTTTCCTCCTTCCTTTCCTCTGAGAAGATCGAAGGCGACGGCGATTGCGGCATGGGATGGGATCCGTATCGTCCTTCGTTTCTGTCCCCATCCCCGCGAACGCTACAAAGGCGGAGGAGTGAAAACGCGGGCGACTCCTCTCCTCCACGCGCTGCG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0317900.1 | 5 | 26322460 | A | T |
| Osa05LNT0317900.1 | 5 | 26323307 | A | G |
| Osa05LNT0317900.1 | 5 | 26323395 | T | A |
| Osa05LNT0317900.1 | 5 | 26323396 | T | A |
| Osa05LNT0317900.1 | 5 | 26323849 | A | G |
| Osa05LNT0317900.1 | 5 | 26324358 | A | G |
| Osa05LNT0317900.1 | 5 | 26325100 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0317900.1 | osa-miR5535 | Cleavage | 4.5 | 22.375 | 1 | 22 |
| Osa05LNT0317900.1 | osa-miR5792 | Translation | 4.0 | 17.88 | 1 | 24 |
| Osa05LNT0317900.1 | osa-miR1862a | Translation | 5.0 | 15.201 | 1 | 24 |
| Osa05LNT0317900.1 | osa-miR1862b | Translation | 5.0 | 15.201 | 1 | 24 |
| Osa05LNT0317900.1 | osa-miR1862c | Translation | 5.0 | 15.201 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0317900.1 | 5 | qNBL-5 | Resistance or Tolerance | Blast resistance | RZ649 | RZ225 |
| Osa05LNT0317900.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0317900.1 | 5 | QFla5 | Morphological trait | Culm/leaf | RG470 | RG346 |
| Osa05LNT0317900.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0317900.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0317900.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Osa05LNT0317900.1 | 5 | qRFC-5 | Physiological trait | Eating quality | RG470 | RG474 |
| Osa05LNT0317900.1 | 5 | qGT5-1 | Physiological trait | Eating quality | RM538 | RM480 |
| Osa05LNT0317900.1 | 5 | qRGR-5 | Physiological trait | Germination/dormancy | RM421 | RM480 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)