© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0028800.1
GTACCATGTTCGATCTCCATTGAACTTAACCAAAAAGCAAACTGAGACACAGACACAGAGAGTAAAAAGTCAATCGACCAATGAACTTTGTTGTTTGCATCCTGGAGCACCAATTTCTACTGGCACAAATTCTACATCATCGCCAGCTTCTACAGCAATACAAACCTGAACCCCAAAAAAAAGCAAAAGGAAGACAACAATAAATGTCTACTGGCAGATTTCACTTGGCGCGAGTTCTTCAGCAGTTTGACCATCGCTAACCCCCTTTCCTTTTCTTTTCTTCTATCTCTTCTTGTGATGTTAGTTCAGAAATCTCTTTTTCAATAGCCTTCATTTGTCGAAGAACATTGGCTCCAGAGTCATGAGCTGCTTCCTTGATATGTTCATACAACTTAGTCTTGCATTCTAGCTCAGCCCTTTTAGCTTCAATTTTCACAGTCCGGTCTACTTCAACTTTTTCAACTCTGAATGATGTATTTCTAACAGGTTTTGCTTTTGGATTCACTGCTAACTCAGACCAATCTATGCAACTATCTGAAAGCGATCGGCGGTGCTGAGATCTTGAATGCCCAACCGTACTTCTATTTTCATCACCCATATCAATCTTTTGAGGAGGAAGATACTTCATATCAATCTTTTGAGGAGGAAGATTAATTGTTTTCTCAAACAATGTGTTGTGAACTGATACGCCTACTATACCTTGCTGTCTCAAAAATATCAAATGACTCTTCAATGTTGCCCTAATGTTATCTGTCATGGTCTCTATCTCAAGCCTTTTCTGTAATAAGGATGTTCCGAAACCCATCTCAGGAAGTTTTAAAAATTCTTTGTAACCCAGTTTGTTGATGTAGCGCCTGAAATCACGTTCTTCTGTTGCAGCTTTGAAAATCCCTTCTTTGGATACCTGTTTTTCATATATTCTTTCCTCAATAGTACACGAGGTTATAAGCCTATAGATGATGACATTCTTCTCCTGTCCAATTCTGTACACTCTATCAACGCATTGATTATCCAGGCTCGGATTCCAAGATGGATCAGCGATGATAACTCTGGAAGCATTAGTTAAATTTAGACCTATACCACCCACTTTTGTGGTCATTAAAAATATGGGAGGCCCATCTTTACTTTGAAAGCCCTTAATAATAGCTTCTCTTTTAGAAGCTGTAACAGTCCCATCCATACGAGCAAAATGTACTCCCTTGTTGGTTAGTGCCTCCTCTATTTCATCAAGCATTAGGCGCGTCTGTGAGAAAATTAGCACCTTGTGCCCTTCTTCCTTAAGTTTTTCCAACAATTGCAGTATAAATGTAAGCTTGCATGACTTGAGACAATTTGATGTCTTTGTGGTATTCTTTGCAATCAAAGCTTCAAGTTTTTTGACAATGCCCTGTAACGTCCTGTTTTCTTTCAACGCTAATTGTTCCTCACAGGAATCTACAGCTGTCAAGTTCTGAGGATGGTTGCATATCTTTTGGAGCAGCATTGTTGCAACAAATGTTGATCCCTTCACTGTCTTATCAATCAAATTGCTCTTCATAAATGTTTCATATAATTATATCTGATATGGCGTTAGCTTCAGCCAGATGACAAGATCAGCTTTATTAGGTAAAAGGCTTTCAATACTTTCCTTGGTGCGCCTAAGAAAATAAGGTCGCACCATTTTGCGGAACTCCATGGCCTTTTTAGAAGATATCATTACTACTTCAGTTGTTGCCTCAAGCACATTTCCCATGTCAATTGGTTTACAGAAGTCTCTTTCAAAAGCAGCAAGAGAGCCCAAGACAGTAGGACAGCAAAGACTCATTAGTGAATGAAATTCCGAAAGGTTATTTTGAACCGGTGTTCCTGTGAGGACAACTGTTTGCCCACGAGATAAGCTTTTCAGCGCAGCAGCATTTTTCGTATTTGGGTTCTTCAGCACGTGACCCTCATCAAGAATCACATAGTCCCATGAAGGACAAGCTCTTCTCATCTTTGAGCTTTTACTGCTCATGCCGTTTAGTTCTTCATTATACAACCTCACCAGATCATACGTAATAAGCAGAACACCACCTTCCTTTAGCACCTGCGCTAGAGAATCATGCCTTGTCTTGGCACACCAGAAGCTATGTATAAGATCTTCATTAAAACCAACTTTTGTTAATTCAGCAATCCACTGATGCAAGATTGTGCCCGGGGCAACAATCAATACCCTTTGTGTCAAATCGGAATAAAAAAGGCCAGCTAGAAAGGCTGAAGCCTGGCGGGTTTTGCCTAGGCCCATATCATCCGCAAGAATTCCCCCACCGGATTTTTCACAGTGGAGCCTCCAGAGCCATTCAAGCCCATCCTTTTGATGAGGGAAGAGACTAGAAAATATCTCACTAGGAAGGAGAAAGGGGTGTTTTATATGGTGTCCAGTTGCTGCGATAACAAAAGCACCTGATCTATTAATAGACACCTTTTCACCACCAAGATTAACAGTGTTGCCATTTGAGAGAATTTTAATTACAGCTAGCTCAGAACTGAAGAGCACAAACCCTGATCCTTCAGAAAGTTTATTTTCATCCTTCTGAGTGATCTGATGGTCAACTACTGTTCCATATGGAGAGAAGAAGTGCACAATATCATCATTGGACACTGTCCAGGGAAGGCCATCCAGAGTTATCCTCCGGTTTGTCTTCTTGTCCTTATACTGAATGGTGTCTTCCATTAATGTTCTATCAACTACAACATGTTTTCCTTTGATAATATGCCTGCACTTGATTATTTTATCAGAAATGGCAGCATCGGCATAAGTAATTTTAGCAGAATCCCCTGCCTGGGCTGTGCCCTTGGCCCTGATAATAATCAAATCAACTATCTTTCCATATTTAATGAAATAGTCTGCTAGGTCAGCTGTCATAAAAAATGACAGAAACCAAATTAGTATTACAAAAAGTTAGTATGCCATGGAAAATCTGTTTACCAGGTAGCTGACTGTAAATATTATAACTATGGAATTCAGATTAGTTAATGAGAAAATCGTAATCATTGAACCGGTGCAATAGATGTTATAATCCATCATCCTCCATTATAGGAATTATTCACTGTTGTTCTTACCAGTTTCAACTCATAAAGTACAAACATCTCTTAAATCGCATGATGGAGTTATGCCTTTGAGTCAATTGAACTGTATATATTTATAAGGAAACATAAATACCAACCAGGGCAGACGAATGGGCTCATGAAATAGGTGCGCACCATTTGCTACTTGCATAGAATATAGAAACAAAAACCCAGAAACTGAGCACACAGATTGAAGAATTTGCCTCAGCAACCTAGTGTGTCATTCCAGTCAGATATTTATTGTCAAGTACAGTACTTAACGGAATCTATGAATATCTATCTTCCAGGACTTGCTTTGAGCTGTTAGAAACTTTTATTTGGAGCAGAAAAAATAACGGAATAATATCCCCAAAAAATACCATATGACAATTCGCTAGGCAGCCCTCTTATAACAACTTGCCCAGCATGGCTGCTGCCCTCGCCAAGTTCCTTAATCTGTACCATCGCTGCAGTTTTTCCTTTCTTTTTTCCTCCTCCGAGACGGCGACCGGCGGCGAGCACGATGGCGGCGCGGCGACTTCCCGGTCGGCTTCCGAGTTCTGATTGCTGTCGACGAGCACGGCAGGAGAGAGCACGGGTGGGTTGGTAGAGTCAATTGGAGCGGATTTACAACGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0028800.1 | 1 | 25525214 | G | A |
| Osa01LNT0028800.1 | 1 | 25526379 | T | A |
| Osa01LNT0028800.1 | 1 | 25527239 | G | A |
| Osa01LNT0028800.1 | 1 | 25528922 | A | G |
| Osa01LNT0028800.1 | 1 | 25531284 | C | T |
| Osa01LNT0028800.1 | 1 | 25531542 | A | G |
| Osa01LNT0028800.1 | 1 | 25525417 | T | A |
| Osa01LNT0028800.1 | 1 | 25527848 | C | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0028800.1 | osa-miR5796 | Translation | 5.0 | 9.822 | 1 | 21 |
| Osa01LNT0028800.1 | osa-miR5826 | Translation | 4.5 | 19.044 | 1 | 24 |
| Osa01LNT0028800.1 | osa-miR1861o | Cleavage | 4.5 | 11.65 | 1 | 22 |
| Osa01LNT0028800.1 | osa-miR395f | Cleavage | 4.5 | 18.16 | 1 | 21 |
| Osa01LNT0028800.1 | osa-miR395f | Cleavage | 5.0 | 19.785 | 1 | 21 |
| Osa01LNT0028800.1 | osa-miR399e | Cleavage | 5.0 | 16.25 | 1 | 21 |
| Osa01LNT0028800.1 | osa-miR399f | Cleavage | 5.0 | 16.25 | 1 | 21 |
| Osa01LNT0028800.1 | osa-miR399g | Cleavage | 5.0 | 16.25 | 1 | 21 |
| Osa01LNT0028800.1 | osa-miR399k | Cleavage | 4.5 | 16.25 | 1 | 21 |
| Osa01LNT0028800.1 | osa-miR166l-5p | Cleavage | 4.5 | 17.824 | 1 | 21 |
| Osa01LNT0028800.1 | osa-miR444a-5p | Cleavage | 4.0 | 11.75 | 1 | 21 |
| Osa01LNT0028800.1 | osa-miR1860-3p | Translation | 4.5 | 18.463 | 1 | 22 |
| Osa01LNT0028800.1 | osa-miR1860-3p | Translation | 4.0 | 15.776 | 1 | 22 |
| Osa01LNT0028800.1 | osa-miR1861a | Cleavage | 4.5 | 11.65 | 1 | 22 |
| Osa01LNT0028800.1 | osa-miR1861d | Cleavage | 4.5 | 11.65 | 1 | 22 |
| Osa01LNT0028800.1 | osa-miR1878 | Cleavage | 5.0 | 15.846 | 1 | 24 |
| Osa01LNT0028800.1 | osa-miR2095-3p | Translation | 5.0 | 16.279 | 1 | 20 |
| Osa01LNT0028800.1 | osa-miR2100-5p | Cleavage | 3.5 | 9.989 | 1 | 22 |
| Osa01LNT0028800.1 | osa-miR2122 | Cleavage | 4.5 | 17.099 | 1 | 22 |
| Osa01LNT0028800.1 | osa-miR2875 | Cleavage | 5.0 | 17.403 | 1 | 24 |
| Osa01LNT0028800.1 | osa-miR3979-3p | Cleavage | 3.0 | 18.787 | 1 | 20 |
| Osa01LNT0028800.1 | osa-miR535-3p | Cleavage | 4.5 | 23.633 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0028800.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0028800.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0028800.1 | 1 | nan | Resistance or Tolerance | Drought tolerance | RM129 | RM5 |
| Osa01LNT0028800.1 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Osa01LNT0028800.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0028800.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0028800.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0028800.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0028800.1 | 1 | nan | Morphological trait | Seed | CDO118 | CDO455 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)