© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0318200.1
CTCTGTTGCTCCGGATAAATTTAGCCGGAAATTTGTTGGAAGGACAATACTGTGTTCTGCGTTTATACAGTTTACAGGACTTGCAAGCTACTAAAGGTTGGTGCCTCCATCTAAAGTTCTAAACACCAGCACGGTGCTGGTGCAACTCTATAGAATGCAATTGCTCCTGGGGGTTCAGAATCTCAGGAAAATCCAAACAACTAAAGCATAACAGCTGCCAAGAGAAGAGATCCACTAGAGCTCCTCAGCCTCACGGTATTGAGAATGAGCCGCAGCAAGGAGAGCAGCGCCAATGCCTGACCCGTCCTTGGCGAGCTTGATGACAATGGTGGAGGACACATCCTCCCCAAGCATGTCCCTCAGGGTGCTCTCCACGCACTCGGCGAAGATGGTGTAGTGCTCGTAGAGCCCACCGTCGACGGCGATCACCGTCCTCTGCTTGTCGGTGTTGGGGACGTCGCGCCCAAGCTTCTTCAGGATCCCGTGTATCCCTGCAGCAGCAAGGTGAGCGGCGCGTTTCGCAACGATGTCGCAGACATCCACCACAAGCCTTCTTGTTTTAAGGGAGGTGTTTTGGACCCCCAGGATATCTTTCAGTTTCGCTCCAACTGTTCTGAGATCAGGTGATCTGTCGCAGTGCATCATTGACATGTATGGAGTCCTGATAATAAATGGAATCTTGAGTTTTGGTGGTACTTCATCACCAAAAAGAGAAGCTTCTTCAGCCATCTTTAATAGGACTCTACGAACAATTTCTCCCAAATACATGCCAGAGATCAACTTTTCGTAAACCTGTTCACCAGGATTCAAACTTTCAGCATCTAATGCTTGATCAAATTCAGTCAAAGGAAGATGGGATGACCTGAAGTTCCCCCATTCCATATTTATTACCATATCTCCTGACTTCGGCAGGAGGTCATGCCATTTAGGAATTGCATTGGCACGTTCCACGTATGCTGCATTAGTACCTGTTCCCAGTATAACAGCAGCAATGACATCATTATCATCATATCTCCCACCAGCCAATGTCCCTATAGTATCATTTATCAATGCTGTGACTTTCATATCAAGCCCCTGGCGTTCAAGAGCCTTGGTTAATTCAGTCACAACATCTTCACCAACCGTTTCATCAATCGAAAAACCCTTAGTCCAATTAATAAGAGTGCCAGATGCAATTGAAGTTTGCTTTACTGGGAAAGAGAACGTAAAGCCAAGTTCTCTCTGCCTCCCCTCAGCAAGATGAAAGTCTTCACCCTCTGAAGCAACAAATTTTGCTAAAGAAGAAGCAATAAAATCAAATAGTTCATTTGAACCACCAGTCATCAGATGCGGAGGAATTGAAATCTCGTCATGTTCTTGCTTGATAACTCTCCCTTCCTTGCCACCTAATTGAACCCGTAAAACACGGAAATTTGTACCTCCAAGGTCAAGCGCATAAAACACCCCCTTCTCTTCCCCGGAAGGGAGGGCGTCGACGTAGCTGATGATCATCTTGAGTTTGCTCCCGCCCTCGGAGGCGAGCCCGGCGTGCATCTCGACGGCCATCGCGTCCGCCACCTGCCGCAGCCGCCCCGGCGGCGCCGCGCACCGCTCCTCCAGCTCCCGCAGCACCGCGTCGGCCCGGCCCCACCGCTTCGCCTCCCGCAGCTGCCGGCGCACCAGCAGCGCCACGCCGAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0318200.1 | 5 | 26419579 | A | G |
| Osa05LNT0318200.1 | 5 | 26420797 | A | G |
| Osa05LNT0318200.1 | 5 | 26422359 | G | C |
| Osa05LNT0318200.1 | 5 | 26419318 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0318200.1 | osa-miR5820 | Cleavage | 4.5 | 13.591 | 1 | 21 |
| Osa05LNT0318200.1 | osa-miR5820 | Translation | 5.0 | 16.455 | 1 | 21 |
| Osa05LNT0318200.1 | osa-miR5079b | Translation | 5.0 | 13.228 | 1 | 22 |
| Osa05LNT0318200.1 | osa-miR172d-5p | Cleavage | 4.5 | 21.622 | 1 | 20 |
| Osa05LNT0318200.1 | osa-miR1852 | Translation | 4.5 | 16.422 | 1 | 21 |
| Osa05LNT0318200.1 | osa-miR2878-3p | Cleavage | 2.5 | 20.419 | 1 | 24 |
| Osa05LNT0318200.1 | osa-miR5079a | Translation | 5.0 | 13.228 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0318200.1 | 5 | qRFC-5 | Physiological trait | Eating quality | RG470 | RG474 |
| Osa05LNT0318200.1 | 5 | qGT5-1 | Physiological trait | Eating quality | RM538 | RM480 |
| Osa05LNT0318200.1 | 5 | qRGR-5 | Physiological trait | Germination/dormancy | RM421 | RM480 |
| Osa05LNT0318200.1 | 5 | QFla5 | Morphological trait | Culm/leaf | RG470 | RG346 |
| Osa05LNT0318200.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0318200.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0318200.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Osa05LNT0318200.1 | 5 | qNBL-5 | Resistance or Tolerance | Blast resistance | RZ649 | RZ225 |
| Osa05LNT0318200.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)