© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0318300.1
TATCTGTATCTTGCTGAATGGAAAATTAGGCTCAAACAGAGAAGGGGTACACCCGTGTGGTAATCATTTACAGTTTTCAAAAGAAACAAGAACGCTATACACTTATGATCAAAAAAAAAAAACGCTATACACTTTTCAGAAGAAAACCTATAGCTATAGTAAATCATCCAGCTATGCATTTACCTAGTACTAACTCCTTTTTTTTTTACAATTGTGAACAGCAAAATCAGGCAGGTTATTCAGCGACCTTCAGCTGAAGAACTTGCCTGCACAATCAAATATATATATTTTCACTCAAGTTCTATCTTCTTCCGTTACCAGATGATACTCAACCTCTGCATCCGTAAATGTTAATGCTTTCTGCAACTTTCTGTGGCAGAGAACCTCAACATCTGCCATGAAGACTGCAGTCACAGGGCGGTGATCAGAAAGCTTAAGCTCTCCTCTCCTGTAGGAAATTAACCTGATTCCCTTTCCTCGTGAAAGAATCCTATCACACCATGCTGGTGTTCTCCTTCCAGATTTTGGCTCATCACTTACATACTTTTCTGAGTCAAACTCGTATTTATATGTTGGGGGGAAGCTGATATCTCCTTCGATCCAACCATCAAAAGTGTGTCCTTTACTCAATTCTCTTTTTAGCTGATCATTCTCAAACAATCCATCCCAATCTTGCTTGGAGATAAGTTCATGTGCTCTTTCATATGATAAGTTGATTCGGTAGTTGAGATCTCCAAACCATATGATCCTTTCATGACCCAATATTCCCTTAGGCGTGCTAAGTCCAGGAAGTGGGTTAAATACTGTTCTTCGGAGGATTTCTTCAACATCTGCATTTCTTTTCAGTTCATCGCCATCCTTTTCTCCAGAAGTTAGGTGGCAACATACAAAGCAAAAATGTGTCTGATGTATAGACATGCTGACTGATATTGACCCCTTGTTGCCCATATAACCCATTGCACCTACACCGACAGTTGATACTCTCAAATTCTGAATGTGCTTCCGCAAGTCTCTCCGAACCCATATTGAAAGATATATTCCCACCATTTGCTTGCTTACTATTCGCAGAAAGCATGGCCTTTTACTTTTAATCACTCCATTGTCACTGTTAACTTGATGGGATAAATCATCATTTGGAAAATTCACTGTTGATTTCAAAGATGCTGGAGTTGCTAGAGCCTTCAGTGAAGTGCTAGCCCGAAGACACTGAGCCATCATATCCAATGGCTGTTCAGGCCAAATCATTCCAAGCCTTTCTGGATGATAGAGTAATTTGGTTGTCTCTTCCAGTTTTGATCTGTCTTTTTCATAACTTAAGTTGGGGGACTGATCAGAAGTCTTTACTGAATCCATCCTGCTGAAATCTTTGCCTTTATGAACTCTTCCGTTGGAAGCAGCACTGAAGTTTTCATATGTTTTATCATGAACTACATCATTGTCAATAGCTATATCATCATTTTGTTTAATCAATGGATGAAGCTCACCATAATTGTCACTGTCAGACTCGCTAAGCAATTCATCTTTCATCACCATAACATAATCTGATGGATTAAACCTTGATGGTGAAGGAGGATCACTGTGACATTTATACTGCGGCTTATCTGGACAAATCTTATTCAAAGTTTCACGAATAATATGCTCCCATACTGCAATTGGACTGTTATCCTCAGAACCAAATATGTTTCCAGCATTTAATGGAACAATTTCTTGAAATCCAAGAACATAAATATCAGCCTGCTCCTCCTTATCCAACCAGTCTTGAATGTCCAGATCACTGGGTGGAAACTTGCCTGCAAGATTCCATGTCCCTACACAAATCCTGAGTTCTCTGATGTCAATATACTGAGCGCGAAGGGTCTCTGATTTGCGTCTTCTAAGCCTGTAAGGCATAGATTTAATTTCATCCCCAATTGTTCCTGCACCAAGTCCATCTAAACTCGTCCCTTCACCATATGATTCATTATCCCTGTCTTCGCCGTCGAGCTCGCCGTCGCTGGCGTCGCACTCGTCGGCGCTGAAGTCGGAGTCGCCCGACCCGGAGCCGACGTTGAGCCACTTGCGAAGCACCACCCTGCGCCACAGCCGCAGCGCGCCGCACCAGCAATCCACGCCGCAGCACAGCATCATCGTCTCGGCGCACCTCTGGTTCTCCCTCCTGCCCCCGCACCGCATCTGGGACGCGGCCATGGCTGGCTCCTGGAGCTGGTGGCCTCGGCGAGGTAGGAGCGGCGACGAGGCGGAGGAGGAAGAGGACGCCATTTTCGCTGGCTTCTTGAGCGGGTGGGCAACTGACTGGGCCGCCGCCTAAATGCAATGTGCTATATAATTGAAGGTTATTAGTACTAAATATTTTAATTAATTACTAAGTCCCCTAAAAACTGCACGAAGTACATTTTTCTAAATATTATTTTGCGGGAGTAATGTTCCCAAAAAAAAGTCAACATAACACCAACAAATTCTCTTTTATAAATGTCAAAAGACTTTACAATTGTACTATTATGTAATGTTCATTAAGATAGACTTGACTATATTATTTTCATATACCTAAAACATATATTTTAAACAATAAAGTGTCTAGTATAATGTATTCATATGATTTGTTACTACTCTACTTTTTTCTACAGAATTAGTCAAACTTAAAGTAGTTTAACTTTAACTAAAATTAAATCACTTTATCACCTGAAATAGATGAAGTACTTTGATTGCGCAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0318300.1 | 5 | 26596872 | C | G |
| Osa05LNT0318300.1 | 5 | 26597089 | G | A |
| Osa05LNT0318300.1 | 5 | 26597896 | T | C |
| Osa05LNT0318300.1 | 5 | 26597953 | A | T |
| Osa05LNT0318300.1 | 5 | 26598956 | G | A |
| Osa05LNT0318300.1 | 5 | 26599162 | T | A |
| Osa05LNT0318300.1 | 5 | 26599557 | A | G |
| Osa05LNT0318300.1 | 5 | 26601722 | T | G |
| Osa05LNT0318300.1 | 5 | 26601806 | G | T |
| Osa05LNT0318300.1 | 5 | 26596991 | C | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0318300.1 | osa-miR1440b | Cleavage | 5.0 | 23.027 | 1 | 21 |
| Osa05LNT0318300.1 | osa-miR1440b | Cleavage | 5.0 | 12.8 | 1 | 21 |
| Osa05LNT0318300.1 | osa-miR6246 | Translation | 5.0 | 16.978 | 1 | 23 |
| Osa05LNT0318300.1 | osa-miR7692-3p | Cleavage | 4.5 | 20.546 | 1 | 24 |
| Osa05LNT0318300.1 | osa-miR319a-5p | Cleavage | 5.0 | 16.683 | 1 | 21 |
| Osa05LNT0318300.1 | osa-miR171g | Cleavage | 4.5 | 18.949 | 1 | 21 |
| Osa05LNT0318300.1 | osa-miR395w | Cleavage | 3.5 | 8.052 | 1 | 22 |
| Osa05LNT0318300.1 | osa-miR810b.2 | Cleavage | 4.5 | 12.593 | 1 | 21 |
| Osa05LNT0318300.1 | osa-miR1847.1 | Cleavage | 5.0 | 16.853 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0318300.1 | 5 | qNBL-5 | Resistance or Tolerance | Blast resistance | RZ649 | RZ225 |
| Osa05LNT0318300.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0318300.1 | 5 | QFla5 | Morphological trait | Culm/leaf | RG470 | RG346 |
| Osa05LNT0318300.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0318300.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0318300.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Osa05LNT0318300.1 | 5 | qRFC-5 | Physiological trait | Eating quality | RG470 | RG474 |
| Osa05LNT0318300.1 | 5 | qGT5-1 | Physiological trait | Eating quality | RM538 | RM480 |
| Osa05LNT0318300.1 | 5 | qRGR-5 | Physiological trait | Germination/dormancy | RM421 | RM480 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)