© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0318400.1
CACAACCATTTCCTGCCTTTTTATTATGCTCTCGGGGTTAATGAAACACATGATTGCCCAGACGGGGCAAATTATTCAGAATAACATGCTACAAGCTAATCTAGCCTTGACATAGTATTTATGTAGCGGAAGGTAGTGCCCGGTTCTTAGGCAAGGGGCCAATGTCATATATGATCTCCCTGTGGCAAGACCAAACGAGTTTAATGGCTTCTGGAGTTCCGATCCCTGCACCTCTTGGATCACCAGCAGGCCCAAACCAGTGGTTCTGTGGAGCACCAGTTGTCCTTGCTCGGATGCCGGCATATGTTGTCCCGTTAACTGATCGCCCAAGTACTTCCTGCAGGAATAAAGGGTCGTTTGAAACAACTGCAGCCGTCAGATGAGCGTTCATCCTTTCACAGGCTTCTAATACTAATTCAAGCTCATCATCAGAATACTCTGTAACCACCTGGAAAGGACCAAAGATCTCCCTTGTCACAAGCTCAAAATTGCCACTTTTAAGGATTTCCGATAGAGGAACAAATACAGCAGTTGGTTTGAAGGCACCATATATTTCTGGGATAGAATGGTTCTCCAGAGGTTCACCACCAAACAGGACCTTTGATCCTGGTATTTTGAGAAGGTTTTTCATGTGCTCTATCATGCTTGATGTTGTAACAGTAAGGACTGGGCCAATGGTCAAGTCTTCAAGCTTCCTTCTTTCAGAAAGACTTTTCATTTTATCAAGAAGCCCACTAGACGACCAATTCTTGTGCATGAATAGAATAGACTGAGCAGAGCACTTCTGACCACTGCAAGCATAAGCATCCTGGTCGCAAACCCATGCAATGTAATCAACCTCTTGAACATCTGGACCAAGAATTTTCCAGTCAAAACCAGCATCTTCCAATTTGATTTTGCCTTTCAAATCAGCAGCCAATTTCTCTGCTATCCGTGAGCTCCCAGTGAAGAGGGTCATTTTCGGATTTGCCTCTAACAGCAGCTTGTTCATCGTGATACCATCAGAATTTATGAAGTCCACATCCTCTGCTGGCATCCCACATGCGTGAAGCAACCTAAGCATCTGGTCCATCACAATGCTAACTTTGCTGTCAACTTTGAGGACAGGTTTATTTCCCATATACAGTGCTCCCATTAGTTGCAGTAATGGAATCTCCAATGGGAAATTGAACGGTGTGATAATTGCAACCGGACCATATGGCCAACGGTAACCATTACTGCTTTGTCCAAGATGGTTGCCAGGTACAGCAAATGATCGAGCCAGAAAGCGTACCTGATCTCCACAAAAGTTCTCCAAGAATTTTTGAGAGACTTGAACTTCTGCAAGAGCTTGCTGATAGCTCTTTGGAGATACCCTCTGGATAAGTTTAGCAAAGAAATCTGAAACCACAGGTTGACCAAGCATGTTTGCAGCTTTGGCAGATATATCTCCATACATGAGATACCTGCATATTAAAGATACCGAAGTTCGTCAAAGCATACATGAGCATTGTTGTTAACTGCCACTGTCAGTGTCAGTTATACAGTACAAGTTTAAATATAGTACACAGTTTTTTATCGTATTGAATTTTTCCTACTCCACAAAGTTTGTTTACTGTGTGTAAAGCATGTTGTTATCAGCAATATATTTTTGGGAAAATTGATAATTTGTCACTCCTTAGAGTGGTACATCATTTTCCAACTCCATGTGACCCTAGGATCACATGTGATAGACACACAGGGGGGTAAATCATCCATTTGATACCAAATCCCCTATGTGTATAGCTTGGCTTTTCGGGGGAGTTGGAGTCAACTGTGCAAGAACAAGGATACTGTAGCTAACTATTCATGTAGCATAGCACAAATACTTCAGTGACCAGGAGTTTGATAAAGCTCTCTGGAGCTTTAAGTGGGTTGTGAAGTCCATGCTTTGGGCAATTAGATAAACTCTCTACAAATGGCTTTATTTCTGCTTCCTGAACCTCAGCAACTTTGATAAATTTTTCACCATTTAAAGGATCAACTAGCCAATTCCAGTTACCAGATGTTGTCCAACTGCCCTGCACAAAATTCTGCACTTCCGCCGGGCTCGAACCTGAAATTTCCTGAGGAGACACCGTCGCGAATGGCGGCGTGTGCATCCACCTGGAGGCGAGCGCGGCGGGGCCTGACCGCCGGACGGCGGCGGCGAGGCGCCGCCGGGAAAGGATGAGGCTCATGGCTCTCGATCGGCGAGCTCGGGCCGCGCGCGGCGCGGCGACCCGGCGGTGGAGCGGAGCGGAGTGGTGTCCTCGCCTCGCTCTCTTCTTTCCACGGTACGGTCTCGTGTCGCGACTCGCTGCGTGCGTGTGCAGTGGCAGCGGCAGCGTGGGTGTCCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0318400.1 | 5 | 26636287 | G | A |
| Osa05LNT0318400.1 | 5 | 26635914 | T | C |
| Osa05LNT0318400.1 | 5 | 26638150 | C | A |
| Osa05LNT0318400.1 | 5 | 26638308 | C | G |
| Osa05LNT0318400.1 | 5 | 26639321 | A | T |
| Osa05LNT0318400.1 | 5 | 26639990 | A | G |
| Osa05LNT0318400.1 | 5 | 26640229 | A | C |
| Osa05LNT0318400.1 | 5 | 26640322 | C | T |
| Osa05LNT0318400.1 | 5 | 26635512 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0318400.1 | osa-miR5526 | Cleavage | 4.5 | 9.222 | 1 | 21 |
| Osa05LNT0318400.1 | osa-miR5821 | Cleavage | 4.5 | 23.897 | 1 | 21 |
| Osa05LNT0318400.1 | osa-miR5825 | Translation | 4.5 | 13.189 | 1 | 24 |
| Osa05LNT0318400.1 | osa-miR166b-5p | Translation | 4.0 | 19.512 | 1 | 21 |
| Osa05LNT0318400.1 | osa-miR166d-5p | Translation | 3.5 | 19.512 | 1 | 21 |
| Osa05LNT0318400.1 | osa-miR166k-5p | Translation | 3.5 | 19.512 | 1 | 21 |
| Osa05LNT0318400.1 | osa-miR167d-3p | Cleavage | 4.0 | 22.861 | 1 | 22 |
| Osa05LNT0318400.1 | osa-miR2095-5p | Translation | 4.5 | 12.603 | 1 | 22 |
| Osa05LNT0318400.1 | osa-miR2876-5p | Translation | 4.5 | 19.082 | 1 | 21 |
| Osa05LNT0318400.1 | osa-miR5150-5p | Translation | 5.0 | 21.882 | 1 | 24 |
| Osa05LNT0318400.1 | osa-miR5339 | Cleavage | 4.5 | 16.193 | 1 | 21 |
| Osa05LNT0318400.1 | osa-miR167a-5p | Translation | 4.5 | 21.157 | 1 | 21 |
| Osa05LNT0318400.1 | osa-miR167b | Translation | 4.5 | 21.157 | 1 | 21 |
| Osa05LNT0318400.1 | osa-miR167c-5p | Translation | 4.5 | 21.157 | 1 | 21 |
| Osa05LNT0318400.1 | osa-miR167d-5p | Translation | 4.5 | 21.157 | 1 | 21 |
| Osa05LNT0318400.1 | osa-miR167e-5p | Translation | 4.5 | 21.157 | 1 | 21 |
| Osa05LNT0318400.1 | osa-miR167f | Translation | 4.5 | 21.157 | 1 | 21 |
| Osa05LNT0318400.1 | osa-miR167g | Translation | 4.5 | 21.157 | 1 | 21 |
| Osa05LNT0318400.1 | osa-miR167h-5p | Translation | 4.5 | 21.157 | 1 | 21 |
| Osa05LNT0318400.1 | osa-miR167j | Translation | 4.5 | 21.157 | 1 | 21 |
| Osa05LNT0318400.1 | osa-miR167i-5p | Translation | 4.5 | 21.157 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0318400.1 | 5 | qGT5-1 | Physiological trait | Eating quality | RM538 | RM480 |
| Osa05LNT0318400.1 | 5 | qRGR-5 | Physiological trait | Germination/dormancy | RM421 | RM480 |
| Osa05LNT0318400.1 | 5 | qRFC-5 | Physiological trait | Eating quality | RG470 | RG474 |
| Osa05LNT0318400.1 | 5 | qNBL-5 | Resistance or Tolerance | Blast resistance | RZ649 | RZ225 |
| Osa05LNT0318400.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0318400.1 | 5 | QFla5 | Morphological trait | Culm/leaf | RG470 | RG346 |
| Osa05LNT0318400.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0318400.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0318400.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)