© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0319700.1
GGTTTGTAATCATGTCATACTATTTATTGACATATAACTGATGCTACACAGGCCACTAATTTCTTTACAAGGGTTGCTTGCCAGCCCCGTGTGGCGAGGCCAATACACAAAATCAATTACACGAGTGACATACAAGTAAGGCCAGGCACAATGCATAATATAATCACACGAAAATCGCATTTGCTAGGACACGATATGCTCTTCTTCTATGCAACCTACAGAAGTTGGGTGCCACCAAATGGGTTGGCTTGCTGATGCCCGTTGTTCGCCATTGGGAATGGGCCAAAACCAGAATCCAAAAATGGGTTTGTTGCAGGGCCCATGCCCACATGCTGCGGTTGCATTGGTGGTCCAAAGGGATTCGCTTGCATCATAGTTGGTATCTGTTGATGCTGCTGAGACATGGCAGCCATTTGAACCGATGGTGGAGGAGCAACTTGGTTCGACATTACGAAAGGATCATTTGACATGAACGGGTTGGGAGCTGAAGAACCATATAACTGCTGTTGCTGTCTCTGCCTGTAGTCCCCCTGGTCATATAGGCTTTCCAAGATGAGCTTGTCAAACCCACCACCCAGTTGACTATCTGCAGCAGATGAATTCGTGTTACTTGGAGTGGTAACAAGGGCGAGTTCCCACCCTGTTGGATCAAATCCTTTATCTTGCCATGTAGCGGTGCTGGATGTTGAAGCACCAGCATCTGCTGGAACAATGGCCAAAGCCAGAGCGTTGCTTTCTTCTATCGCTGATACACTAGGGTTCGGATCATTTAATCCCAGTAGATCACCAGTATCTGCCACCTTAGTCTTGGGAGGAGGAGGAGGTGAAACAGCTTCAGTAACAGGTGGTACTGGAACAGGTTCTTCAACAGGTGGTTTTTCCTCTTCGACAGGATCAGGCACAGAATCTTCCTCTTGTTCTTCAGGTTTATATGTCAGAAGAAGCCTCTCAGGTAATTCCAATGGTTCTCGCACTGGAACCATGCGTGGAGCCTCCCTCACATACTCTTCCATAGTGACAAGAAATGTTTGTGGCGGCTCCCTCAGAGTGGGAAATTGGAAATTCCTAGCAAGTTCTAGACCCCGGCAATTTTCATAGAAGTCAGATAGGCTCCCAGCCTGTTGGCCTGCCCTCCTGTAAATTTCAAGGGCTTTGAGTGCTTCATGTCTTGGCATCTCAAAAAACTTATCAACAAGGTTAATAATCCCATCGTTTATTGCACAATATATTTTGAAGCTCTCTTTTAGCACCAAAGCTAGAGCATATTGCACCAAGTAGTTATTATTTGCAGCTCCTTCCGGCCGACATCCAACAAGTCGATATAGTAACTGCTGCAAAGCTGGCAACTGCTCTAACAGATCCTGGGACTCCAATTCTCTGGTTCTGCTGTGCCCCTTTTCAGGACCTTGACCTTGTTTGGACAAACGTTCAGCTTCAACGTCATACTTGAGGACCCTGAAGCATTCCAATCTTTCCTCCAGAAACAGACCATATGTACGAACCCATGCAGAACAGTCCCAAGCAATTGGACTGGAGTCATCCTTGAAGTTTGAGAGCTGCAAAATACGCCCCCTCTGTGCAAAATTAAGAAGCTCTTCTCGAAAAGTAGGGTCACCCTCTCGAAGAAGTCTATGGATCACTACAAGTGTTTTCAAGGCTACAATCCAATTGCGTGTTTTTGCAAGCCGGCGGGAAAGCGCGTGGATACAATAGGCGACGTCTGCCCGAGGCCGAGCGATGGACGTCGCGGCAACAATCTCTGCAACAACAGCATACACGCCATCAAACACGGAAAACACCACCCGAGGCCAACCGAAAAATAGAACCCTAATAGCCTCCCCTCTCAGGAGCCTCCCCACTTTCAGGCACGATCTAATTATAAAACCCCAGTAATGCCTAATTAATCAAAAACCTAATACACGGAAATATACGGTGTGAGAACGAATCAACGCACTGCGCAGGTGGCGCTCCTTGGGAGGGCACTCCACGTGGTTAGTCGCCTTCACGATCGCCACATCCAGATCCTACAAAAAGCACACGCCCAAACGAATTTCCAATCAGAACCACACAGATCTAAAAGCCTCCACACCACATCAAAAAAAATCTAGGGTTCCCACGAATCGGCCAAACTCGGCCAGAAGGGGAGAGAAAAAAAAAATCCATCCCCCGGGAGTTCCGGATCCGGACCTTGAAGTCGGAGTTGAGGTTGGCGAGGCTGACGGTGGTGGAGTCCTTGAGCGCGCCGTACGCCTTGCGCCAGCTCTGCATCGCCGCCATTCCTGCGGCTCCCCTCCTCCGCCTCCTCCTCCTCGCCTCGCTAATTTTGGGGTGGTTTCTCTCTCTCTCTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0319700.1 | 5 | 27237794 | A | G |
| Osa05LNT0319700.1 | 5 | 27237847 | A | G |
| Osa05LNT0319700.1 | 5 | 27238663 | C | G |
| Osa05LNT0319700.1 | 5 | 27238697 | A | G |
| Osa05LNT0319700.1 | 5 | 27239069 | T | A |
| Osa05LNT0319700.1 | 5 | 27239218 | C | T |
| Osa05LNT0319700.1 | 5 | 27239232 | C | T |
| Osa05LNT0319700.1 | 5 | 27239668 | T | G |
| Osa05LNT0319700.1 | 5 | 27240449 | A | G |
| Osa05LNT0319700.1 | 5 | 27241857 | A | G |
| Osa05LNT0319700.1 | 5 | 27242338 | G | A |
| Osa05LNT0319700.1 | 5 | 27242435 | T | C |
| Osa05LNT0319700.1 | 5 | 27242534 | T | A |
| Osa05LNT0319700.1 | 5 | 27242844 | T | C |
| Osa05LNT0319700.1 | 5 | 27242935 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0319700.1 | osa-miR5806 | Cleavage | 3.5 | 15.146 | 1 | 21 |
| Osa05LNT0319700.1 | osa-miR399i | Cleavage | 5.0 | 13.758 | 1 | 21 |
| Osa05LNT0319700.1 | osa-miR393b-3p | Translation | 5.0 | 18.728 | 1 | 21 |
| Osa05LNT0319700.1 | osa-miR439a | Translation | 3.5 | 18.274 | 1 | 21 |
| Osa05LNT0319700.1 | osa-miR439b | Translation | 3.5 | 18.274 | 1 | 21 |
| Osa05LNT0319700.1 | osa-miR439c | Translation | 3.5 | 18.274 | 1 | 21 |
| Osa05LNT0319700.1 | osa-miR439d | Translation | 3.5 | 18.274 | 1 | 21 |
| Osa05LNT0319700.1 | osa-miR439e | Translation | 3.5 | 18.274 | 1 | 21 |
| Osa05LNT0319700.1 | osa-miR439f | Translation | 3.5 | 18.274 | 1 | 21 |
| Osa05LNT0319700.1 | osa-miR439g | Translation | 3.5 | 18.274 | 1 | 21 |
| Osa05LNT0319700.1 | osa-miR439h | Translation | 3.5 | 18.274 | 1 | 21 |
| Osa05LNT0319700.1 | osa-miR439i | Translation | 3.5 | 18.274 | 1 | 21 |
| Osa05LNT0319700.1 | osa-miR444a-5p | Cleavage | 4.5 | 16.335 | 1 | 21 |
| Osa05LNT0319700.1 | osa-miR1429-3p | Cleavage | 4.5 | 13.413 | 1 | 21 |
| Osa05LNT0319700.1 | osa-miR5488 | Cleavage | 3.5 | 22.41 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0319700.1 | 5 | qNBL-5 | Resistance or Tolerance | Blast resistance | RZ649 | RZ225 |
| Osa05LNT0319700.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0319700.1 | 5 | QFla5 | Morphological trait | Culm/leaf | RG470 | RG346 |
| Osa05LNT0319700.1 | 5 | nan | Physiological trait | Eating quality | C246 | C1447 |
| Osa05LNT0319700.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0319700.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0319700.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Osa05LNT0319700.1 | 5 | qGR5-1 | Physiological trait | Germination/dormancy | C246 | RM26 |
| Osa05LNT0319700.1 | 5 | qRA5-1 | Morphological trait | Shoot/Seedling | C246 | RM26 |
| Osa05LNT0319700.1 | 5 | qRDW5-1 | Morphological trait | Shoot/Seedling | C246 | RM26 |
| Osa05LNT0319700.1 | 5 | qRFC-5 | Physiological trait | Eating quality | RG470 | RG474 |
| Osa05LNT0319700.1 | 5 | qGT5-1 | Physiological trait | Eating quality | RM538 | RM480 |
| Osa05LNT0319700.1 | 5 | qRGR-5 | Physiological trait | Germination/dormancy | RM421 | RM480 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)