© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0320100.1
TACGAACTGAATTCAAAATTTCACTCGTTAAATGGATAGTAACATCCGAACGTATACACCAATCATCCGAAATCTATATGTCAAACTATTACACGTTGATCTATGACATGATGCAACAAAGCTCACATCGTTGCACAAAAAATACACTTGAGTTAATCATCGTACTTCTGTGAGTTTTTCATCTGTAACTGACTGCCCGACCATTTCCTTTCCCACACTGTTTGGAGCACTTACCAAGATTTTAATCCGTCCAGAAAAATACACATTCATTGATGAGCCCCTCTGATGAAGTGCAGGGTGAGCAACTGGTAGGCTATTTTTCAGTTCCAGTTCTTTCTTTGCCTGTAAAAAAATTGACAAATAGAACCTAATCACTTCTCTGTGATATGAAATTCCACGTAGTCACGCGGTAACAATGGTACCCTACCAACCTAAAATGTTTTTTCCTAATCATATTTTCTTTAAAGAGCGTAAATGGTGTGAGTACTTTCTGTTCTTCTGCTGGGCCCTCCAGAAGCAAGCCAGCGCCCCAAATGTACAGCTGGCAATCGCAACACCCAGGGCAGCTCCAATTGGGACGCTTGCAGCATTAGAAATCGATGAATCCTCTGAAACTATCTTCTTCTCTTGTTGCTGAAGAGACTCCATGTAGGTCTCCTTGTAGGATGATACAAGCTTCTTTCCATAGTAGTTAACCAAGAATTGATACACTGCATCCTCGTTCCAGTCCACAGCTCCATCGGTGACCTTGCTTGAGCGGTAGCAAGATGGGCAGAGCTGATTTGGAGGCCAGGTAACCTTCGGAAACAAGGGATCACCAGTTCCCATATCCTTTTCTTCTTTCATCAATCTCATATTGACTTTGTTATGTGTGCTCCATAACCAGAGACTGAGCTCACGAGCAGTTCTGAAGGGGGCTGACACGCTTGAACACATTTCATAAAAGTGCTTGCGGCATTCCTCACAGATGAAGAAGTTGTGAATAAAATCACATATTGATGTAAAGGTTGACTGGCTCTCTCCATCCCCAATTCGGACGGTTAGTGAATGCATCAAAACCCATAGACCACAGCTAAATCCTCTTGTTTCACTTTTACTGCCGCGGCAGAACAGCCAATATCCACGTGGCACCTCTTTTCCACAGATCCAGTGGTTCTCTTCCGCAACACTTTCCAACAATTTAGAACCCTCTTGTGAACTTAACGACAGATTCGATGACCAGTGATCATCGAAGTTAATAAGTAGCTCAGCAGATCCCCTTCGGCACCTCTTGGATGGGTGACGAGCCACCAAAATTTGTAAAAATCTGATGAGCGAATCACGATTCTTTGGTTTGATCGTCTTGCGCTCCAAAATTATCTGTAACGCTTGAGCTGTTGCTTCCTCAACATCGTAAATTGCTTGAACAATCTGCTCAGGATCCGAAGCATTCTTTGGAAGCATATTTTCATTCTCGTACTTTTTGTCTTCTAAACTGAAAGAGCTTTTCATCTGATTATTTATCCACTTCAGTAAACGTTCTGCTGTTCTTCCATCATCAATTAACTTTATTTCATTATTCTCTTGCTTGGGATCCCACTTAGCAGAAGCAAATTTTGTTGGTGGACCCCAAAGTAGGAAAGGGTAATGGTCAACTGAGAATCTATTGCAAAGATCGATGTTCACCTTTGATGCACAATCAACCCTAGCCATCAGTATTAACCCTGGATGTGCAGCGTCCCGACCATTGAATAGTTTTGCAACCTTCTCATAATGAGGCTTGTAGTTTCTGCAAGCTGGACACCAGTGGGCGAAGAACTCGACGACGGCCCAGGGCTCCAGCGAGGCCTTGAGGAAGGCGTCGAAGTTGGTGGCGTTGAGGTCGACGGCGGCGTCGGCGTCGACCTCCCCGGGGCCCTCCCTGCCGCCGAGCGAGCGAGCGGCCGCCCCGCGCGGCGCCGCGGCGAGGGAGGCGGCGGCGAGGACGAGCACCAGGACGACGCGGCGCGCCACCGCCGCCGCAGCCATGGATCGGGCCACCGGATCTCTCTCCCGCCGCCGTGATCCGCTTCGGACACCTGCCCCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0320100.1 | 5 | 27475375 | T | C |
| Osa05LNT0320100.1 | 5 | 27474180 | A | G |
| Osa05LNT0320100.1 | 5 | 27475067 | T | C |
| Osa05LNT0320100.1 | 5 | 27475611 | T | G |
| Osa05LNT0320100.1 | 5 | 27475963 | A | G |
| Osa05LNT0320100.1 | 5 | 27477190 | G | A |
| Osa05LNT0320100.1 | 5 | 27478071 | T | C |
| Osa05LNT0320100.1 | 5 | 27477772 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0320100.1 | osa-miR5528 | Cleavage | 4.5 | 9.825 | 1 | 21 |
| Osa05LNT0320100.1 | osa-miR5834 | Translation | 4.5 | 11.533 | 1 | 21 |
| Osa05LNT0320100.1 | osa-miR1425-3p | Cleavage | 4.5 | 17.453 | 1 | 21 |
| Osa05LNT0320100.1 | osa-miR5144-3p | Cleavage | 4.0 | 14.922 | 1 | 21 |
| Osa05LNT0320100.1 | osa-miR5486 | Translation | 4.5 | 14.837 | 1 | 21 |
| Osa05LNT0320100.1 | osa-miR399f | Translation | 5.0 | 24.878 | 1 | 21 |
| Osa05LNT0320100.1 | osa-miR399g | Translation | 5.0 | 24.878 | 1 | 21 |
| Osa05LNT0320100.1 | osa-miR399e | Translation | 5.0 | 24.878 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0320100.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0320100.1 | 5 | QFla5 | Morphological trait | Culm/leaf | RG470 | RG346 |
| Osa05LNT0320100.1 | 5 | nan | Physiological trait | Eating quality | C246 | C1447 |
| Osa05LNT0320100.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0320100.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0320100.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Osa05LNT0320100.1 | 5 | qGR5-1 | Physiological trait | Germination/dormancy | C246 | RM26 |
| Osa05LNT0320100.1 | 5 | qRA5-1 | Morphological trait | Shoot/Seedling | C246 | RM26 |
| Osa05LNT0320100.1 | 5 | qRDW5-1 | Morphological trait | Shoot/Seedling | C246 | RM26 |
| Osa05LNT0320100.1 | 5 | qRFC-5 | Physiological trait | Eating quality | RG470 | RG474 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)