© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0320300.1
GCACAAACCAACTGATAATCTAGCATTCTAGCTGAATTCCAGCGTAGAAGCAGGGATCTGCTGATAAGAGTTCAATATGATATTCTTCAGAAGGCCAAGATGGTGTGGCGTCAATCACATACACAGCGGATTAAGGCTCCGCAGGTAGACGACACCCTCATGCTATGGGGAAAAAAGATATATAGCCCCTAAATACAAACACGGATATGTCGTTTATGTTTACCGGGGCAACTACAAGGCTATTTACATAGGCTACTTCCAGGAAACGGTTAGAATCCGGGGGCATAATGAGTTGAGGATCCTATTTCAATAGCGAAATTATTACTCCCGTCTATCGACCACGCGAGGCTATCAACTTATAGCCTCAATGTGGTGTCTGCTGGAGCTCTAGAAGCCGCGGCTTTGGCCTTCTCAGCTAGGAATTTGTCACACTCTGCTCCCTTGACAGTGAATTCCATCAGAAGTTCCTCAAATAATCTCTTCAGCGCGCTCTTAAACCTCGCCGAGCAGCTCTTGTCGCCCTCATCGACATCCTGCACACCATTTCCAACAAGACATCCAACTTGGGCACCGTCCAGATAGGCTCTGCAAGCTATCAGGATGCTCTGGCCATACTTGCGGAAATGACCGGCGATAAAATCCTCAAAATGCTTTGGTGGATTTCGCAGAGAATATAGCATTGTCCTGCAGGATAGCAGGAAAGTATCTTCATTATAAGTTAATGAACTCTTCTCGCCATGAGGTGTATTAGCATGCATGGCATATCCAGGCTCATTGAAATAAGGTTTGGCATTCAACACCAAAGCCTGAACTGAGACCAGGACTTGTAGCATTGTTGAGTTTGAAGGACTCCACCTCTCACATCCACTACCAGACCAGGTGTTCAACAGGCTAAGGCACACCTTCCCGCAAGCATACAAGTTTGGATTAAGCCGCAACCCACCAGACCGATAGTTCACCAGTGGAGGTACACTCGGATAATGAGGAGGGAAGTAAATGTCAAAGAAGAAGAGACCATCATGATAGGGAGTGCCTGCTGGTCCCGTAATAACAGCTCTAAGCAGGTCCATTCTATCCTCATATGCCCTCACGAATATGGTATCTGGTAAATCTTTTTCTAGAACTTTCCACTCGTGCTGAATACGCTTTGCCCATTCTTTTGAAGGCTTTTTCACTACCTGAACCTTTCTTAAATCTGGCTTCGAATAATAATGATCACTGTGATCATCAACAGTATCGAATTGCTTAAATGCACTGTATTTTTCATCAATTTTATCATCCATCATGTTCACAGGTTTGGTCTTATTTGCCATCTCTGCCGCAGTCGTCTGCAACCATGGTAAAGGAGCCTCCACACCAGGTGGGATATCCAAACCATCAAACTTGGAAGCCAAAGTGAAGTTATATTCACTTTCATAAAGTGTACTATCATAATCGTAATCATCATACTCATCTTCATCATAACCATAATCTTCTTCAAATGCCTCATAAGCATAGTCATCAATGTTGTTGTAAAATGGGTTCTCTTGAAATATTTTCAGGCCACCAAGTAATATATCAGGATTTTTTGATGGGTAGGAACTTGGGCCAGCAATTTCACCAGCCAAACTACTCTTTGCATGCTTTAGCCAGTCTATAGGATATCCAACAGCTTGCTTATTCTTATCAACTGATGATTTTTCACCAATAATCACAACTCCATCAGGATCATCATCAGCATCCAGTTCAATTACTTCATGAGGAACAACCTATTCAGCGTATAAAAAAAAACTCAAGCCCCACCATTTAACATTTCATAACATGATATTACAAAAATGTTTTGAAGGGAAATAATTGATCCTATACAGGAAATCGTGGTGGCTGAAAAAGCCAGAAACGTCACGGCAATGCTGAGTTCATAGAATAAAAACTGACATGGTTACTACTAATTATTCATCTTTATATTTGGCCTCTTTATGTTCTTTGGAGTCTGAACTCTATCTTGATTTCCAACAATGATGGTTGATGGAGATGGGCTTTTGGTCACAAAATATCATATGTTACAGAAAGAAAAAGAAGGCCCAGTGACACCTTTAAACAAACAAATTTCACTTGAGGCATCTCTAGATTAACCACAAGTTTTAGATGATTGTTAAAACATAATCCTAGAGTTATAGAAAGACATCAAAGAACCAAACAACCCAATAGACTAAGCTGGAATAATCAGATGACATGTACTTACAGCTTCCAGTCTCTACTACCAACGTCATATGTCAGATTATGTCTAAACCAGAATATTGGGTAGTAGGTAAAGATGTCAAATAATTGAACAATTGACCTAACAGACAGACAGAATAATCAAATGGCATGCACTTTCAGTCTGCCCATCCACTCTGGAACTGAAAATATTGCACATGCCAACATCACATTTACATGCCTAACTCTCCAGATAAGAAACAAACAAGGATTTTTACTCAAGCAGTGCCAGAGAATGCTAGACTACCACTCAAAAGCCCAACCAAAGATGTCCCATGCTAGATTTCCTTCAACATGAATTCTAGTCCATCATGAACCAGGCTGAAACATGGTGTCACTCTAAAGTCTAGACAGTCTAGATTGCTTCTCTCCTGCTTGGTTTATCAGGCATTTCAATGCAATCAAACCCTCTAAAAATTTCAGTACTGCAATCATAAACTATAATTCAGCAATCATCTAACAAAAACAGCCCAACTTCTCACCATACAAAAAAAACACAAACTCCACTTGATATTCAACATTGAGCGCATCTAAGATCAAAATTCAATATATCAAACTGCCACTGCCAGTCCATCTCAACCATTTCCTGGCACAATCAAAGATCATCTGCCCACACAATTCTAGTGCAATTCCACACCAAAATAACAGGTCATGGCATAACTGGAATCAACACGCAACCATTAAAACGATCACCAACCCTCCTTCCCACATCGAGCAATCACGCGCCCCAGTCCCCCCTACGGTTCCCAATTCCAACATCACCAAAAAAAATAATAAAATCATGCACCACAAACAAAGGTGAGATAGAGGAGGCGCCTTCCCACATCACCTGACTCCGCTTCCGCTTCTGGTGGCCGGAGCTCCACCCCCCTGCCGCGGCCGCCGCCGGCGTCACCTCGACCACGTCGGGATCATCGAACGACGAGCTCCCCGCGCAGAGGTAGCCCTTGGGGGCGTGGGTCGCCATCGCCGCCGCCGCCCAATGCGATCGCTCGCCGGCCCGCCGCGGCGCGAGGTGGCCCGCTTAGGGTTTCCGGCGAGCTAGGAGAAATGGAGAATTGGGGGAGGAAAGGGAGGGTTTGGGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0320300.1 | 5 | 27734526 | T | C |
| Osa05LNT0320300.1 | 5 | 27736768 | A | G |
| Osa05LNT0320300.1 | 5 | 27738185 | C | G |
| Osa05LNT0320300.1 | 5 | 27735545 | C | A |
| Osa05LNT0320300.1 | 5 | 27735709 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0320300.1 | osa-miR5794 | Translation | 5.0 | 10.744 | 1 | 21 |
| Osa05LNT0320300.1 | osa-miR5834 | Translation | 4.5 | 11.456 | 1 | 21 |
| Osa05LNT0320300.1 | osa-miR5079b | Cleavage | 4.0 | 22.941 | 1 | 22 |
| Osa05LNT0320300.1 | osa-miR395u | Cleavage | 5.0 | 7.905 | 1 | 21 |
| Osa05LNT0320300.1 | osa-miR396e-3p | Cleavage | 3.5 | 13.797 | 1 | 24 |
| Osa05LNT0320300.1 | osa-miR444a-3p.2 | Cleavage | 4.5 | 14.665 | 1 | 21 |
| Osa05LNT0320300.1 | osa-miR816 | Cleavage | 5.0 | 18.613 | 1 | 20 |
| Osa05LNT0320300.1 | osa-miR444d.2 | Cleavage | 4.5 | 14.665 | 1 | 21 |
| Osa05LNT0320300.1 | osa-miR444e | Cleavage | 4.5 | 14.665 | 1 | 21 |
| Osa05LNT0320300.1 | osa-miR1846a-5p | Cleavage | 4.5 | 23.874 | 1 | 21 |
| Osa05LNT0320300.1 | osa-miR1846b-5p | Cleavage | 4.5 | 23.874 | 1 | 21 |
| Osa05LNT0320300.1 | osa-miR1846c-5p | Cleavage | 4.5 | 23.874 | 1 | 21 |
| Osa05LNT0320300.1 | osa-miR2872 | Translation | 4.0 | 19.472 | 1 | 21 |
| Osa05LNT0320300.1 | osa-miR5079a | Cleavage | 4.0 | 22.941 | 1 | 22 |
| Osa05LNT0320300.1 | osa-miR5501 | Translation | 4.0 | 21.677 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0320300.1 | 5 | qRNw5 | Resistance or Tolerance | Other soil stress tolerance | C1447 | RM26 |
| Osa05LNT0320300.1 | 5 | qRSd5 | Resistance or Tolerance | Other soil stress tolerance | C1447 | RM26 |
| Osa05LNT0320300.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0320300.1 | 5 | QFla5 | Morphological trait | Culm/leaf | RG470 | RG346 |
| Osa05LNT0320300.1 | 5 | nan | Physiological trait | Eating quality | C246 | C1447 |
| Osa05LNT0320300.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0320300.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0320300.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Osa05LNT0320300.1 | 5 | nk2(t) | Physiological trait | Eating quality | nan | nan |
| Osa05LNT0320300.1 | 5 | tp5b | Morphological trait | Culm/leaf | RM26 | C1447 |
| Osa05LNT0320300.1 | 5 | qMRL5-1 | Morphological trait | Shoot/Seedling | RM26 | C1447 |
| Osa05LNT0320300.1 | 5 | qTDW5-1 | Morphological trait | Shoot/Seedling | RM26 | C1447 |
| Osa05LNT0320300.1 | 5 | qRFC-5 | Physiological trait | Eating quality | RG470 | RG474 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)