© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0320400.1
ACATACTTCACATGCTCAAAACACACGTGAACTGAGTAACTGACCACAAACCCAACCACACCAGCTGCCTCAACCACACTTACAAGTTACAACAGACATCACCATGTTAAGTATCATACAAACCAGGCAGCATTTTATTTTGGGATACACAAAGTCACAAAGCTTGCACATATACAGTACATACACAGCATATATTGGTGTCCCGATTTTGTCACAAATACACAGTAGTCCAGTGTCACAAACTCACAATGCCATGAGTCACGGGCTGCAGGGGATGCCGGCTTCAGAGAAGGTGGTGACAAGCTTCGGCAAGAGCTTGGCTAGCATTATCTTGAAACCGGTTGAGGAGTTCTTGCATCCGTCATCCGATATATAGGCGCTGTCACGAGCATGTCCAACAAGATCGCCGCCGAGATAAGCCTTGCAGGCATCCAGAATGTGCGGCGCGCAACAAGTGAAGTGCTCCTTGACAAAATTCTCGAAATGCTTTGGTGGCTTGTGTAAAATGTACGTCATGGACTTGCATGACAGCAGGAAAGCGTTCTCATTGTAAGTGATGGAGTTCTTCTCTCCATCTGCTTTCCCCATGAATTTGTCATAGCCAGCCTCATTGAAGTAAGGTTTTTCATTGAGAACAAGAGCTTGAAGGGACAGCAGCAGTTGAAGAACAGTTGAATTTTCAGGGTCCCACACTTCACTACCAGTTCCTGCCCATGTTTTGAGCAGGCTAAGGCACACTTTGCCAGACTCATACAAATTTGGGTTCAAACGGAGGCCACCGGAATGGTAGTGAACAGAAGGTGGCTCATGAGGATAATCAGGAGGAAAGAAAATATCAAAGAAGAAAAGATTGTCATGATAAGGTGTTCCAGCTGCACCTACAAGGCATGCCCTCAGGAGGTCCATCCTTTCTTCATAAACTCTAACATGAATACCATCTGGCAGATCGTTTTGTAAGATTGACCATTCCTGTTGTATCTTCTTCACCCAACCTCTTTTGACATTTTCGTGACCAATTTCTTTGACAAAGTGGTGATCAGAACAGTCGGTCACAACATCAAATCCTTTTGTCATGGCATTTTCTGAAGCTAATGTTGGCTTCTCAAACTGTGTTATCAGCTCCATGGTCTGTTTCTCTTCAGAGATATCTTCTGCAGATGGCTGCAGTTCTGCTGTCGTCACAATTTGATACTGAGAATCTGCATTGACCGAGCTGGAAAATGTTGAATCATGAGCACCAAACAAACTAGAAGCCACATTTGTCAGAAAATTAAATGCTGTCTTGGAAAAGAGGAAAGCAGTGGCTTTGCGCAAGGATCCTGTACAGTCTCCAGCAGATTCTTCCAGCGCACTCTTAGTATCCTCAAGGTGCATTTTCTCCTGCTCAGCCATGTCTACCAAATCATCAGTAGTGTGCTCCTCGATCATGGATTCTAGAGAATCATCTAGAATCCTATCTAATGCAATAATTTCAAAATGCTGAACCCTAGATATCGCACCACTAGCCCATTGGACTTCAAGTCCTTCATCATTGTATCCAAGAACATTGCCAATACATGATAAGAAGGCAGAGGAGGTATCCAAGCTCTCCCTGCTAACTGCCACGGTTCCATTGGTAAGATTTGCTTCAGAATTTTCTATGTTGACAGCAGATCTAATAATGACTTCGCCAGTGAAGAAGGAGAAATCTGGGTGTAATACTAGCTCATAAGCACTCACAGTCTCCTCAGTGAGTCCATCTCCATAACTGACAGTGTCACTATCAACTGAAACAGCCCATTTTACCTTTACAGTCCGTTCAAGTGCATCCACACTTGTCACTATCCCAGTCCGCTGGCATCTACCATTATCCTCAACTGTCAATTTCTCAAGGATAAATTGCCCAGGCCAAAAATCATGATCACCAAGAGTACTCACAGGAACCAAACTTTGAGGTTCTAAACCAAGAGATGTACTTCCATCTTGCCATAAAACATCAACACTACTCTTTGTCTTTGCAACAACATATGTTTGAGAATAATCTGAACCATAAGTTCCGATAGCCGTTTGAGTGTCGGAGCTGGACTTCCAGGTCATACTCATGAAGCAAGATTTGTCAGAATTTTCCCAGAGACTTCCCTCGCAATCCGAAAGAGTGCACCAGTCACCCAACTGCCAATTGGCATAAGGGAAGCATGAAAGCAAAGTGAGCTTCTTTGGGTCCTGAAAGTTTGGAGGACTTGATGATTGACCTCCCCAAACATTTGTTACTGAGGTGATCCAGTTCACATGTACCAGCCCAACGTCGACATGAGACACTACTCCTTCATCTCTACTAGCTTTCCATGATCCACACAACCATGTACCCGACTTAGAAATGGAAGGATGAACAATTCTCACACGTTGGCCTGGATAGTAAAAATAAGGTGCATCTTCAAAAAGGATTGGAGGAATGGGCTTCAGTACCTCAGAATCTCTTAAGAGCATTTCACACCTTGCCCCATCACTGAACACAACAGTGACCAGGTCAAATGCCCTGATCACCCGTCCAATCCATGGCCCCATCACCACACAATCACCAGAGACAAAGGATCTAACTCTTGAAAGTTTCTTGCTGTTGACATGTTTTATTATGTCACCAGAGCTCGTTTCCAAGTCAACAAGCATATCAACTCCAACTACACGGCCCAGCTGACCTGATGGGTCAGCTGCAGAGCAAACTATGTCTCCATGCAGAAATCCTCTTTCAAAACTTAGAAAGTTATCGATCTTTCCAATGCTCTCGTCCAAGCTGGACAAGATGTTCTGGGCATGACCACAGTATGTAAGTTCACATTCTTCTTGGTCTTCTTCACTGTCACTAGTTTCAGCGTATGACTCAGTGTCCGAGTCAATTGCATATAGATCCATCTTTCCGAGCCCTTCTTAGGATAGGCGCACTGATGTATAGAGTTGATAAATAACAAAACAATCTTCCAGACTGAACAATCAGAATCTGAAAGCTTCCTGTCCAAGATGCTAAAATACAACGGCCACCAGCCAAAAATTATTTCTTGAATCGTTCTGGACTTCCTGGTGTTCAGTCTTTCACTGAGATCGATATTGTGGTAGAACCAATGTGTGTACAGTGCTAATGCCAAAGGAGAATTACCACGATATATAGTTGCAGGAAATAATGATGTAATACCACTAACTTCCAGAGGATATTTGATCCAAATATCTAATGCGGATAGTAGTAGAGTACCTAGTGCCAAAGGAGATTTGCCCAAAGAGCAATCTGAAGCTAAAGGTAGTGCCAAAGGAGATTTGCCCGGAAGCAATCTAAGCTAAATGCCAAAGGAGATTTGCCCGAATAGACAGACTATAGATAGGTATTTTGCCAAAGGAGATTTGCCCAGCTGAAGGGTTCTCTCAATAAGAGGAATATGCTCAGGATAATCGATCGACAGGAAGGTGCAATTGCCAAAGGAGATTTGCCCTAAAACAAGGAATAACTTGTCACAGGTGTTAATTCCTGGAGAGGTAAAGACCGGCTGAATGATTTTTTTTGCTTTGGATGATTAGAGGACACAAGTGGTCATAAGCAACAAATCTCATCAAGAAAGCAACAAATATAACAAGCTTTCATTAGATATGGCTTCACTTGATAAGATCACGAGAATATAATGTTCTTTCAAGTCTATTTGCATTGATCAGCAGGCCCCATGAAAGTGCATCCATCCCCCTTTACAGGATCCCGGGATCGCATGCAGAATATCCATCCACACGGCTGCTGAATTCGCCGTCCAAAGTGCAGCACAATCTCATCATCTGCATCTGCCTTTTGGTTGGTCAGCTCCTCACTTCCCCAGCTTTCTGTTAAAATTCGGTAGAGATCCTGATGTATCAGAACCTGAAACCCTTCTCTCCCCCGAGACAATGTGGCTGCATTGCTGGTTGCTTGCTGCACTTAGCTTTCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0320400.1 | 5 | 27742138 | A | C |
| Osa05LNT0320400.1 | 5 | 27742835 | T | A |
| Osa05LNT0320400.1 | 5 | 27744584 | T | C |
| Osa05LNT0320400.1 | 5 | 27744699 | T | A |
| Osa05LNT0320400.1 | 5 | 27745987 | A | G |
| Osa05LNT0320400.1 | 5 | 27747904 | T | C |
| Osa05LNT0320400.1 | 5 | 27748739 | T | G |
| Osa05LNT0320400.1 | 5 | 27748072 | C | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0320400.1 | osa-miR5526 | Translation | 5.0 | 17.463 | 1 | 21 |
| Osa05LNT0320400.1 | osa-miR5531 | Translation | 5.0 | 14.685 | 1 | 22 |
| Osa05LNT0320400.1 | osa-miR5542 | Translation | 3.5 | 17.977 | 1 | 21 |
| Osa05LNT0320400.1 | osa-miR5792 | Cleavage | 5.0 | 19.806 | 1 | 24 |
| Osa05LNT0320400.1 | osa-miR6247 | Cleavage | 5.0 | 15.265 | 1 | 21 |
| Osa05LNT0320400.1 | osa-miR6251 | Cleavage | 5.0 | 20.527 | 1 | 21 |
| Osa05LNT0320400.1 | osa-miR6255 | Cleavage | 5.0 | 11.919 | 1 | 22 |
| Osa05LNT0320400.1 | osa-miR166a-5p | Cleavage | 5.0 | 19.654 | 1 | 21 |
| Osa05LNT0320400.1 | osa-miR166b-5p | Cleavage | 5.0 | 19.654 | 1 | 21 |
| Osa05LNT0320400.1 | osa-miR166e-5p | Cleavage | 5.0 | 19.654 | 1 | 21 |
| Osa05LNT0320400.1 | osa-miR395b | Cleavage | 5.0 | 16.716 | 1 | 21 |
| Osa05LNT0320400.1 | osa-miR395d | Cleavage | 5.0 | 16.716 | 1 | 21 |
| Osa05LNT0320400.1 | osa-miR395e | Cleavage | 5.0 | 16.716 | 1 | 21 |
| Osa05LNT0320400.1 | osa-miR395g | Cleavage | 5.0 | 16.716 | 1 | 21 |
| Osa05LNT0320400.1 | osa-miR395h | Cleavage | 5.0 | 16.716 | 1 | 21 |
| Osa05LNT0320400.1 | osa-miR395i | Cleavage | 5.0 | 16.716 | 1 | 21 |
| Osa05LNT0320400.1 | osa-miR395j | Cleavage | 5.0 | 16.716 | 1 | 21 |
| Osa05LNT0320400.1 | osa-miR395k | Cleavage | 5.0 | 16.716 | 1 | 21 |
| Osa05LNT0320400.1 | osa-miR395l | Cleavage | 5.0 | 16.716 | 1 | 21 |
| Osa05LNT0320400.1 | osa-miR395s | Cleavage | 5.0 | 16.716 | 1 | 21 |
| Osa05LNT0320400.1 | osa-miR395t | Cleavage | 4.5 | 16.716 | 1 | 21 |
| Osa05LNT0320400.1 | osa-miR398a | Translation | 4.5 | 13.481 | 1 | 21 |
| Osa05LNT0320400.1 | osa-miR395m | Cleavage | 5.0 | 16.716 | 1 | 21 |
| Osa05LNT0320400.1 | osa-miR395n | Cleavage | 5.0 | 16.716 | 1 | 21 |
| Osa05LNT0320400.1 | osa-miR395p | Cleavage | 5.0 | 16.716 | 1 | 21 |
| Osa05LNT0320400.1 | osa-miR395q | Cleavage | 5.0 | 16.716 | 1 | 21 |
| Osa05LNT0320400.1 | osa-miR395w | Cleavage | 5.0 | 17.683 | 1 | 22 |
| Osa05LNT0320400.1 | osa-miR395r | Cleavage | 5.0 | 16.716 | 1 | 21 |
| Osa05LNT0320400.1 | osa-miR1424 | Translation | 5.0 | 18.577 | 1 | 21 |
| Osa05LNT0320400.1 | osa-miR444f | Translation | 4.5 | 19.062 | 1 | 21 |
| Osa05LNT0320400.1 | osa-miR1850.1 | Cleavage | 4.5 | 13.462 | 1 | 21 |
| Osa05LNT0320400.1 | osa-miR1882e-3p | Cleavage | 5.0 | 10.938 | 1 | 24 |
| Osa05LNT0320400.1 | osa-miR2869 | Translation | 5.0 | 19.316 | 1 | 21 |
| Osa05LNT0320400.1 | osa-miR2873a | Cleavage | 4.0 | 19.726 | 1 | 24 |
| Osa05LNT0320400.1 | osa-miR395y | Cleavage | 5.0 | 16.716 | 1 | 21 |
| Osa05LNT0320400.1 | osa-miR5521 | Cleavage | 5.0 | 14.526 | 1 | 21 |
| Osa05LNT0320400.1 | osa-miR5521 | Translation | 4.5 | 17.976 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0320400.1 | 5 | qRFC-5 | Physiological trait | Eating quality | RG470 | RG474 |
| Osa05LNT0320400.1 | 5 | qRSd5 | Resistance or Tolerance | Other soil stress tolerance | C1447 | RM26 |
| Osa05LNT0320400.1 | 5 | qRNw5 | Resistance or Tolerance | Other soil stress tolerance | C1447 | RM26 |
| Osa05LNT0320400.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0320400.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0320400.1 | 5 | QFla5 | Morphological trait | Culm/leaf | RG470 | RG346 |
| Osa05LNT0320400.1 | 5 | nan | Physiological trait | Eating quality | C246 | C1447 |
| Osa05LNT0320400.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0320400.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Osa05LNT0320400.1 | 5 | tp5b | Morphological trait | Culm/leaf | RM26 | C1447 |
| Osa05LNT0320400.1 | 5 | qTDW5-1 | Morphological trait | Shoot/Seedling | RM26 | C1447 |
| Osa05LNT0320400.1 | 5 | qMRL5-1 | Morphological trait | Shoot/Seedling | RM26 | C1447 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)