© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0320900.1
ACTCAGAAAACTCATTCATTCAGTGATGCACTTCCCAAAGAGTCCTAACATGCCGGAAGCCATACAAAAGGCTTTTGCTACATGCTACTAGTAAACAACTTGCTGCTATACCTTTATTCAGTGCAAGCTATTATCAATAGAAAACACTGGCTTATCTAGACGCCTAGAATATTTTTTTAGATAAAGGAGATTTCTTGGGAATTATCCTGGTCACAAGACAACTTCCTAAGTTCTCGTCAGATACTTGCAGCATAAACATACTAGCAAAAGGCTAAACGACCAGCATGACACTTGGTACAACTACTCCAAGTATCTCGCAATGTGACTTGGCAGCTCAGCGCTGTTCCCTTCCATAGTCAGGAGCTTGTAGAAAAGATCCCTGCGCAAGGCAGCAACCCTACCCGAATCTAGAACATTGCTCAGCTTGCCATCATAGAACTCGCGCGCATAGTATAATGTGTGAAAAACAGAGTTCCATTTTTGGCACCTCGGGCTAATCTTTGTGTGGTACGTACATGTCCATCCATCCGGGTTAATATCCCAGTCATCGAAGAATTTGTTTATACATGTTAGCAAGCCTGTGTGGATCATCGTAACTGTCTGACGGTGCTTAGCACTCACATCGGAGACCTCCCGGTGTTGCAAGACAGGGTCCAAAATGTGCATTTGCCTCTTCTCCCATGTCCCAAATGTAGCATGCCCATGTATCACTAGCTAATTGAACCGGGGAAATGAGCAGTTGGCAGTTCTGTATTTTGTAGCCGCTAATATGTTGATCAAACATGTCACTGACTGCTTTCATGGAACTGAAGTTTCGTTCAAACATCAAAGCTTTCGCGAATTGGGGTAGGAAGAAGTGACGCCACCGCTGCCCACATGGGTTTGTATTCATCTTGGCATCTAACTGTTGGTAGAGTCTGATCAATGCTGAACAAAGGTCCGCATGTAGAATACCACCGCGGATGACCTGCATTTTGATTTCCTTGGCACTTATCTCAATTGATGTAGGCTTGTCGTGCTTGAACCAAACCCCGGTTATATCGTCATCACATGACTCCTCAAGCCAACGGAATAATCTCCCAGCTAATATAGAGTTTGGCCACCATTCATGAACTGTGCGCATTGAAAACGATGACATGCAAGATGGCCTTAGATGATTCCCCGCCTCTTTCGTCATCTGCGTCTCGCAACGTTCTGATTGCCCTTGGTACTTATCCTGTGCACCATTGTTGTTTTGATCCAATGTGGCGCCGTCTCTCATGTTAGCTTCTCCCACAGCAGCTGCTGATACCAACCAATCGAGGAAACATTTGTCTTGCGTTTGGAAAACTGTGTTTTGGACTTGATCCAACCCACGATGGTTTGTATGAACTGCTGACGTCGCTTGGGCTGGTGATTTTAATAGATGGTGATGTGCGATACGGGCCGTGCGTGACACCGACAACGGATTTGCACGGTCAGCAGCTGGATTTTGCTGCCCTCTTGCTGCATTTGCCAATTTGTTTGGCCCTAACAAGTCACCTTTGCCTCTCAAATCAATGGGGGTTTGGGATCTATTTGCTGCAGAAGCCTCATGTGACAACTTGCTTCGTTTACGAGTAGTCTTGGCACCACCATGTGATGCAGTTCTTCGCATCGTTGCTGCTAGCATATCGTCAGTATCCACACCTTCGATTGCGCCATGTAATCGAGCGTTGGATCGATCGGGATTTGCTTGGACAGCTTGATCCATTACAGCCGAGTAACATTTCTCACCGTGTTCCGCTGCCAAAGCCTGCATGCCTTCCGTTAAAGATGAAAAAACGAGGCCGCATTTCTCGTTGTGCTTCGCTAACAATGCCAGAATGCCTTCCTGCGTTGCCTGAAATGAATCTTTGATCTCTGCCATGGCCTCATCCAACATCTGCGTGCATCGTTCGCCAAAATGACGCGATAGATCGGACAGCTTGGCAGGCAGGTCGTTGCCATGGCTATCGCTATTGCTCGGGTCAGTGTCGTCGTCGTCCGAAACGTCTATGGGCTCCTCGTAAGCATCACACCGAGCTTTACCTTTGCCCTTCATTGATGAAGAAACAACTGACTCAACAACATTTTTTCGCTTCAAAATGGAGTACTACGCAGTAATACGCTTAGCTTTGATCTCTACCGTCTTAGTAAAGCACAATCGTATTTTTTCCCTTCCCACTGAAAAACCGCTGAAAAAAATCCATTGTATATAAAAAAAAGAGACCAAACCTAAAGAGATTCTGAAAAAGAGAGAAAAGAAAGAATCACGTTCAGCAGATCCCGTCCCGTTGCAATGCTTGAGCCCGAGGCAGCCTGTGACTACTCCCTCCGTCCCTCCCAAACTAATAAGCGTGTGTTTGGTTTGGGGACAAAGTGGGATGGGTTAGACCTATCCCAGTTTTTTAGGATGGGATAGTTCCAGTTGTCTGTTTGGTTTGTGGTATGGGATGGTTATAGTTTTTTGTTTGGTAGAAGGGATTGAGGTGGGATGGGATGGAGAACTTTCACGGACCGTTAGGGCCGTCTGGCTCCCAGCGGCTACCTCGCAGACGAGCGGCGGCGGTCGTTCACAGAGGCGGAGGAGGTTGCAGACGAGGCGGCGGCTGGACGCGGAGGCGCGCGCGGCGGCAGTCGCGGACGAGGCGGCGGCTGCGCACGGAGGCGGAGGCGGTCGCGGAGGCGAGGCGAGGCCCGGACGAGCGGCGGCAGTCGGTCGCGGAGGCGGAGGCGGAGGCGGTTGAGGACGAGGCGGCGGCCGGACGCGGAGGTGGCGGCGGTCGCGGACGAGGCGGCAGCCGCTCACGGAGGCGGAGGCGAGGAGAGGCGCGGATGAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0320900.1 | 5 | 27960235 | G | A |
| Osa05LNT0320900.1 | 5 | 27958502 | T | C |
| Osa05LNT0320900.1 | 5 | 27958572 | G | A |
| Osa05LNT0320900.1 | 5 | 27959045 | A | C |
| Osa05LNT0320900.1 | 5 | 27960290 | G | A |
| Osa05LNT0320900.1 | 5 | 27960627 | T | C |
| Osa05LNT0320900.1 | 5 | 27961814 | T | C |
| Osa05LNT0320900.1 | 5 | 27961315 | G | A |
| Osa05LNT0320900.1 | 5 | 27960675 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0320900.1 | osa-miR5526 | Cleavage | 4.0 | 19.63 | 1 | 21 |
| Osa05LNT0320900.1 | osa-miR1437b-5p | Cleavage | 4.5 | 24.542 | 1 | 21 |
| Osa05LNT0320900.1 | osa-miR418 | Cleavage | 3.5 | 15.391 | 1 | 21 |
| Osa05LNT0320900.1 | osa-miR530-3p | Cleavage | 4.5 | 16.148 | 1 | 21 |
| Osa05LNT0320900.1 | osa-miR1846d-3p | Translation | 5.0 | 12.154 | 1 | 20 |
| Osa05LNT0320900.1 | osa-miR2926 | Translation | 4.5 | 21.718 | 1 | 20 |
| Osa05LNT0320900.1 | osa-miR2926 | Translation | 5.0 | 15.906 | 1 | 20 |
| Osa05LNT0320900.1 | osa-miR395x | Cleavage | 4.5 | 20.143 | 1 | 21 |
| Osa05LNT0320900.1 | osa-miR5160 | Translation | 4.5 | 18.5 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0320900.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0320900.1 | 5 | QFla5 | Morphological trait | Culm/leaf | RG470 | RG346 |
| Osa05LNT0320900.1 | 5 | nan | Physiological trait | Eating quality | C246 | C1447 |
| Osa05LNT0320900.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0320900.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0320900.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Osa05LNT0320900.1 | 5 | tp5b | Morphological trait | Culm/leaf | RM26 | C1447 |
| Osa05LNT0320900.1 | 5 | qMRL5-1 | Morphological trait | Shoot/Seedling | RM26 | C1447 |
| Osa05LNT0320900.1 | 5 | qTDW5-1 | Morphological trait | Shoot/Seedling | RM26 | C1447 |
| Osa05LNT0320900.1 | 5 | qRFC-5 | Physiological trait | Eating quality | RG470 | RG474 |
| Osa05LNT0320900.1 | 5 | qRNw5 | Resistance or Tolerance | Other soil stress tolerance | C1447 | RM26 |
| Osa05LNT0320900.1 | 5 | qRSd5 | Resistance or Tolerance | Other soil stress tolerance | C1447 | RM26 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)