© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0321000.1
CCTGCCGTACGAGGTAACTTTGTACGGGAATGATTTCCGACATTGAATATACTGTGTATACATCCTGCTACATGTTGGTAAATTACCAATACACTTCTACAAAACCGATAATCCTCTACTATGTATGGATAAACCATCTGTTTGAGCTAGATAGAACCAGATGTAAACCGTACCATCACTTGGTTGCCACGTGACCTTCAAAAGGCCAGACTTCTTAATTCATTCGTTTTATTCGCTATACTCGGAAGAATATGATGTACCGTCTTCATCCTCGTCACCGTTCTCCGCTCCACCACCGCCACCATCGCCATCGTCATTGTCCTCGACATCATCCTCGCCCATCTCAGCATCGTCGTTGTCTTCGTCAACATGCTGTTCTGCATCGTAGTCCTCTCCATCTTCCTCACCATCTTCATCCCCTTCGGCATCTTCTTCATTATCGTCACTCCCATCATCCATCATCTGAAGAGGGCTGGACCCAGAATTGTCCCTTGAATAATCTGGGAGCAGCTCATCGTACTCCTCGTTCATGGGTTCACTATTTTCCTCACTCGATTCCTCTGACTGAGAAGCTGAATTGTCCTCATCATCCTTGACATATGACGGCCTTCTCTCCAAGCCCCACTCTTCTGCACCAGAACTCTGAGGAGACTCCATGGCTGTTGTATGCTTTGCATTCCTTAGCATGCTAAAGCTGCCCAGCAAGTTTGGCTTTGGAATTGATCTGGCTCCAATATCTGATGGCTGCCGAGGTCTAACAGTTCTAAGTCCACGCCCACGTCCACGATTACGCCCTCGACGAGCATACTTTCGAGGAGCTTTCTCAGATGACACGGCGCTGGCACTGTAACCCCTGAACTCGATCTTGGGGGAGCTGCTAATACCTCTTGGGACCTTGCCACCACGACTCCGGGATCTGCCTCCCCTGCTACCGCCTCGACTACCTCGTCCACGGCCACCCCGACCGCCTCGTCCGTTGCTTGGAGTTAGCCATGTTTCTTGTCGATCAAAACCTGTTCCCATAGGTTCAGTTTCTTGTTTGGTCTTAGCAGGAGTATATCTTGGCGGAAGCTTCATGAACTCTCCAGCTCCCCGCTCCTTGTTTGATCCCACCTTCTGACGAAGAGTGTATGAGATGGCAGAATCTAGGTCTAACAATCTTAAGACAACAGCAGCAACAGTGTCAGGAACCCATGGAAGTACATCAGCAGATCCAGAACGTGGAACAGTATTTCGAGAAGCTGAATCTTGCGTGCTTAAATTAAGTAACTCAGTTGTTGTCTCAAAGTCAGATGACAAGAAATCCCGTCTTATGGCACCTTCCAGAATGGTTAGCATCTCAAAGACTTCTTTTGTAGACGATGTGGAATACAACTTCACACCCCAAGATTTCCGATAAACATCTGTCCAGAATGGTTCGAGAGCTTCAGCTGGAACTGAAGCCTCAACGGTTGCTAAAAGCAGCTTTAGCAATCTCAATCCTACAGGAACAGAATAGTCTGAAATTTGCATCTTCCAATTAGGATCTGTTCTCCGTTTCTCTTCACACTGTGAAGAGTGTTCTGAGATATTGTGAATGGATTTGAATGTCTTGTGGCAAGAAGCACAGTGTGTTTCTTCAGCTAAGTAAATCTGATAGCAGAAATCACAACATTGTATCAGCTCAGAGCATCGTTTCTTTCCATGTTTCATGGCACATGTTGGTTGGTGATTGTTGCATTCTTTCCACATCCACTTTATAAACAGATCAGCCCTTTCTGAAATTGCAGTCTTTTCAACATCATTACGCCCAAGTTCTATCCTGAAGGAATCTGAATATGCCATAGCACTATCGGTTGCAACACCAGAAAGGGTACTGCATGGACTTCCAAACTCGTTACTATGATTCGGACTTATGATCTCACTAGTTCCATTTTTCAAAACCCTTCCGGCCGACGGTTCTATGCTGGCACACCTTTTCCTCCCAATAGCTTCCTTGAAGGTTGGTTCAATGCTTTGCAACATTGAATGAAGATGTGACTCACGGATGCCACGAGTATCAAGAGAAGATACTAATGCATCAAAAGTCTCAATTGAGTCAATCAGCCTCCAGTATCCATCTCTAGATTCAAAAAAGATCCTTCCAGAACCAGGGTCATCGGGGGATGCAGAAGTTGAAAACTGCCAGTACCGGTTTCTTCTCCGATCTTGCCCGAGGGGTAGTGATCTGTATACATGAAGTTGTTCTGCTTTGTGGCCTATATATGATTTCAACTGAGATCTTGTTTTCTCAGATGTAACATATTGTTGACCAGACAAATTTTCTGGATTAGCACTAAATTCCTGCCTTACACCGTTCCTTTCATGAACCACGCTGCAAGCATTAGGCTGACTCTGCTGATCGACAGGCAACTCGTTGTTTACTAAGCTGCCATTTCCATTACTGTCTTTAACAAGGTTATGCACCGGTGTAAGATTACTTTCGGCGAGAGTATTTTGTTGATCTACATCGGTCTTTAAACCCATACCAGAATCATATTGCATTTTACTAGAAAATTCCTCCCTCGAACGTCTTTTATCAAGTTGTGCTTCTGCCCACATTTGCTTTTTCAAAGCACTTGCTGCCTCCAGCCGTTCCTCAAGAACTGCACGTATAGAATTTCCTTCAGTGGCAACACCAATCAATGCAACCAATGCATTGAGGCGCTCCTCAACACTGAGATCACAGTAGTCACCCTCCGCTAGCCCCTGTACCCAGGACTCCCCCTGGTTACTTTCGTCAATCTCTGCGTCTTGAGCACTGTCGGAAGCACCTTCATGATTATCCGATGAGATTTCAGCTGGTAGATCACTTGTAGTACGGACTTGTACAGACTTGTCCAGAGTGCGCAATGAGCTACTCTCAGAAGATTTAGTGTGGATGAGTGGTGTCGTTAATGAGTTAACTATGCTATTTGTTTCCTTCTTTATGTCACCAACTGCAGTTGGCATGCCACCATCTTGTGCCTTAACCAGGGAAGTCTTGACATCTTTTTCCTCAATATTCACTTCATCACCATCAGGATCATCGTCAGCATCATCACACTCAGAATCTTCATCCCTCTCAGCATCATCCACATCCTTCTCCACTTCTTCACACTCAGAAATAGTGTTCTGAAACACCCTTATTTTTTCACGTGCTGCTGCCAACACAGCCTCTGAATCAGCAGGATCTTTTCTGTATGGAGTTTTAACACAGTATGTTGAAGGTGCAGTCCTTTCGAAAAGCTTTGAATCCCTTGACAGTGCAGCAGATATAGATGCCTCAGGTGTCTTGCTTGTTGTAAGGTCTCTCAGTCCAGATTTCTGTATTTTTTCTGCAACTTCCAATATCGTGAGACCTTGGCTCCCTTCAAGTGACAACACATGGAACGCAGCAAACTTTACAGTTCCAGGTGTCAGACGGTGTCGAGACCTGCGGCGATTACCGTAGCCTCTTTCTTTCATTTTAGCAGCAGCATTTACAGCTGCTGAGCCACTTCTCAGTATGGAAATAACATCCTCACCATTACGACCCTCATTATCATCATGATTATTGACATTTTCAGCATTCCTTTTCCTTAACTGTGGTCCAAGACCAGCAGATAAACCAAACTGGCGCAATATTTCAGGCCATGTAAGCAAATTCAAGTGTCGCTGCCAGGCAAGTATGTTGAAGCCCCAATCGTATGCCCCTTCAACAATTTGTGGATGACCACCTCCAGGATTAGCAGTCATCCCTGAAGCAACTGAAGGAGTCCGGGCAACATCCTCAATATCTTTTATTATGGATTTCAGCAGAGCAACATGCAATTCTCCCAACAACCTTGAATCATAATCATGAAGAGACTGCACAAACTCATCAAGCGTGAATGACGGAATCCCAAGAACATCCGCAAAGGTAATGAAGAACTTCCACACCATCAAAAGGTTTCCAATATTATCTTCAGAGCTTGTCCATGGTTTTATTGAAAATGGCACCTTCAATCTCACAATTTCACTAGGAAATTGTCTCAGCATTCCTCTGAATGAATCAAGCTGCTGCAACGTGTCGCTATCAAGAGATAGCATAGAGGGCAACCCTTTGCTTCGTGAAACCAGTTCCATTAGTTCTAGGCGCTCATCTTCCATGAGCTCCATATACTCCCGTGCAATTCTACGTGCTGTAGCCCTTTCATTGGCAGCCTTCTGCCTTGCGGCTTCTTTCTCCTTACGAAGCTCCTCCTTTTGTCTTATTTTTTCAGCTCTTAAGGACTGCTTCAGCAAATATTTTTCCATTCGCTTGTGTTCACGCCTTTGTTCCCTTTGGAATCTCTCTTCTTCCTTCTGCTTTTCACGCAACAACCTCTCCTCTTCTTTCCTTCTTTCACGATCATTTCTCTCCATTTCCCTCCGCACTTGTTCTTCTCTCTTTCTGTTCAACATATCTTGCTTCTCGAGCTCCTTTCTGATTCGTTTTTCATGAGCCTCAACTTCCTTTGCAATCTTCACTTCCTCGCTATGTTTGCGCTTTCTTTCCATTCGAAAAGCATCGTCATCATGATAAACCATTCTGTCTGAGGGTGCAACGGAGTTTTCAAATCCAGCAACCTGAGGAATTCCATACTGGCTTTCATTTGGAACAGAACTAGAATTGATATTAGATGGATCCATCTCATAATCTGTTGATCCCGATGAAAAAACTGGTGGCCTGCCATGTAGAGATAAATGGCTAGAACCAGAAATTTGTCCATGGAATGTATAGCCAGGTGCCTTTTCAACACCATGGAGGAATCGTGATCCTGTCGACATCCTTGAATCCGAAGCTTCAGTTAAAACATCATAGTATCGTGACTGGGTCGTCCTCTCATATATATCACTTGACTGTTCAGGAATAAATTGGTATTCACGAACTGCCCGTGAACCAAGATGGGAAGAACTTCCTGTCATGGACTTTCTCTTCCCAGAAACTGTACTTGGAACAAAAGGATCTATGCTAGGCAAGAATGCAGATGCCTTAATGTGCTTTGTATCATGCCCAGAAAACATTTTGGCCTCATAAGATCGGAAAGGCTGTCTCTGTTGCTCTGGAACAATAGGCGCCCCAAATGCGCCAGGAGGGAGAGGATCAAACTCGACACCAAGCACTGGCCCATCCTCCCGGAGCGGCTCCCCTATCAGTCGTTCCACAGAATCAATCACCCGGTGCTCAGCTCGTGTGAGCTGCATTGGTGCCAACGGAGGTAGCATAACTTGTGGTGGCTCATAATATCTCCGCGCAACCTCTGATGCAGAAATCCTCGGAACAGCCGATGGTCTGCCAGTTCCTCTCCGGGAAGAGGGGGACAGCAACGGCTCGCCATACATCCCACCAGTACCCATTGTTAGCTCGCTGTGTGGCAGTGGTGGTGGCAGAACAGGAGGCGGCGCCATAACCGGCACAGGAACCTCCTCCTCCAGCTGCTGCCGCTTCGGCGGTGGCTTACGGTCCTTCAACCGCCGGTGGCAGAACCACATCTGCAGCTGCCTGTCCGTCAGCCCTAACTTCACAGACAACTCCGCTCTCATCGTCTCATTTGGATACGGATCCTCTGTGTATGTCCTCTCGAGAACCTCCAACTGATAGGGCGTCTTCATCACGCGCTTCACCTTCCCGCTGGATCCAGAGGCGCCTGCTCCACCACCAACGGCGGCGGGAACGGGAGCGGAAGCGGAAGCCGGAGCCGGAGCCGGAGCCGACGCCGGGGCAGGGCTCTCCTCCTCCACCCCAGCCGGCGCAGCTCCCGCTCCCTCGTCCCCTCCATCGCCGGACGAATCCATCCCCCCACCCGATCAATCAAATCGAGAATCCCAAACCCTAGATTCGCCGATTCCGCCCGCCGCCAACACGATCGATTCAACACACAAACTCCAAAATCCAGCAAACCTAAATCCCCTCGATATATAGCCCACGGGCCAACGACGACCCGAACCGAATCCGGCGACGACCTCGATCCGCAGCAGCAGCAGCAACAACAACAACAAAACGAGGGGAGGAGCAGGATGATGAGGAGAAGGAGGGTGCGTGCGAGAGGGGAAAGAGACCGCGGGGAAGAAGAGGAATAGAAAGAAAAGAGGAGGAGGATGAGGAGGAGCAACACGGGAGGCCACTCCAAACCTGTTCTTCCACCGCTCGATCCGAACTGGTCAGGATTTGGATCGCTCGTTCCATCGTGGTGTTACTACTACTACTCTCCTAATAAAAACCCCCCTTTATTATTCGCTGCTCCTGCCTGCCTGCCTGACTCTTCTGCCGCCTCTGCTTCCTTCCGCTGTGTTTGTTGTTGTTGTTGGTGCTATCCTTTTTTTTTCTCTTCGCGATGGGGAGAGGAGAGGAGAGGAGTCCGGGAGTGTGCGAAGGAAAGCGAGGAAAGGTGCGGAATAATGATGGGATGTGGCTGCGTGGGCGCTCGGATTCGCTGGGGTTCGCTCGATCTTGCGGCGTTGGCGAGCGA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0321000.1 | 5 | 27976492 | A | G |
| Osa05LNT0321000.1 | 5 | 27977399 | T | C |
| Osa05LNT0321000.1 | 5 | 27977647 | A | G |
| Osa05LNT0321000.1 | 5 | 27978177 | T | C |
| Osa05LNT0321000.1 | 5 | 27979716 | A | C |
| Osa05LNT0321000.1 | 5 | 27980767 | A | G |
| Osa05LNT0321000.1 | 5 | 27980872 | A | G |
| Osa05LNT0321000.1 | 5 | 27981079 | G | T |
| Osa05LNT0321000.1 | 5 | 27981444 | G | A |
| Osa05LNT0321000.1 | 5 | 27982781 | T | G |
| Osa05LNT0321000.1 | 5 | 27982946 | C | T |
| Osa05LNT0321000.1 | 5 | 27983451 | A | C |
| Osa05LNT0321000.1 | 5 | 27983757 | T | C |
| Osa05LNT0321000.1 | 5 | 27984033 | A | G |
| Osa05LNT0321000.1 | 5 | 27984520 | T | C |
| Osa05LNT0321000.1 | 5 | 27984715 | A | G |
| Osa05LNT0321000.1 | 5 | 27985852 | T | C |
| Osa05LNT0321000.1 | 5 | 27986566 | G | A |
| Osa05LNT0321000.1 | 5 | 27986686 | T | C |
| Osa05LNT0321000.1 | 5 | 27986892 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0321000.1 | osa-miR5534a | Cleavage | 5.0 | 16.603 | 1 | 21 |
| Osa05LNT0321000.1 | osa-miR5534b | Cleavage | 5.0 | 16.603 | 1 | 21 |
| Osa05LNT0321000.1 | osa-miR5536 | Cleavage | 4.5 | 14.414 | 1 | 22 |
| Osa05LNT0321000.1 | osa-miR5816 | Cleavage | 5.0 | 13.297 | 1 | 24 |
| Osa05LNT0321000.1 | osa-miR5820 | Cleavage | 5.0 | 20.278 | 1 | 21 |
| Osa05LNT0321000.1 | osa-miR2873c | Translation | 4.0 | 13.646 | 1 | 21 |
| Osa05LNT0321000.1 | osa-miR2873c | Cleavage | 5.0 | 9.03 | 1 | 21 |
| Osa05LNT0321000.1 | osa-miR1440b | Cleavage | 3.5 | 9.173 | 1 | 21 |
| Osa05LNT0321000.1 | osa-miR6247 | Cleavage | 3.5 | 21.129 | 1 | 21 |
| Osa05LNT0321000.1 | osa-miR1861o | Cleavage | 4.0 | 12.936 | 1 | 22 |
| Osa05LNT0321000.1 | osa-miR396a-3p | Cleavage | 4.0 | 12.783 | 1 | 20 |
| Osa05LNT0321000.1 | osa-miR396b-3p | Cleavage | 4.0 | 12.783 | 1 | 20 |
| Osa05LNT0321000.1 | osa-miR164c | Cleavage | 4.5 | 7.994 | 1 | 21 |
| Osa05LNT0321000.1 | osa-miR172d-5p | Translation | 4.5 | 20.574 | 1 | 20 |
| Osa05LNT0321000.1 | osa-miR419 | Cleavage | 4.0 | 7.859 | 1 | 21 |
| Osa05LNT0321000.1 | osa-miR419 | Cleavage | 4.5 | 13.005 | 1 | 21 |
| Osa05LNT0321000.1 | osa-miR435 | Cleavage | 4.5 | 21.411 | 1 | 20 |
| Osa05LNT0321000.1 | osa-miR444a-5p | Cleavage | 4.5 | 14.052 | 1 | 21 |
| Osa05LNT0321000.1 | osa-miR444a-5p | Cleavage | 4.5 | 14.037 | 1 | 21 |
| Osa05LNT0321000.1 | osa-miR1426 | Cleavage | 4.5 | 5.644 | 1 | 21 |
| Osa05LNT0321000.1 | osa-miR1429-3p | Translation | 4.0 | 15.997 | 1 | 21 |
| Osa05LNT0321000.1 | osa-miR444b.2 | Cleavage | 4.0 | 11.485 | 1 | 21 |
| Osa05LNT0321000.1 | osa-miR444c.2 | Cleavage | 4.0 | 11.485 | 1 | 21 |
| Osa05LNT0321000.1 | osa-miR810b.1 | Cleavage | 5.0 | 19.887 | 1 | 21 |
| Osa05LNT0321000.1 | osa-miR1435 | Cleavage | 5.0 | 24.7 | 1 | 20 |
| Osa05LNT0321000.1 | osa-miR1442 | Translation | 4.5 | 12.459 | 1 | 20 |
| Osa05LNT0321000.1 | osa-miR1854-5p | Translation | 3.5 | 12.994 | 1 | 21 |
| Osa05LNT0321000.1 | osa-miR1861a | Cleavage | 4.0 | 12.936 | 1 | 22 |
| Osa05LNT0321000.1 | osa-miR1861b | Cleavage | 5.0 | 12.936 | 1 | 22 |
| Osa05LNT0321000.1 | osa-miR1861d | Cleavage | 4.5 | 12.936 | 1 | 22 |
| Osa05LNT0321000.1 | osa-miR1861f | Cleavage | 5.0 | 12.936 | 1 | 22 |
| Osa05LNT0321000.1 | osa-miR1861i | Cleavage | 5.0 | 12.936 | 1 | 22 |
| Osa05LNT0321000.1 | osa-miR1861l | Cleavage | 5.0 | 12.936 | 1 | 22 |
| Osa05LNT0321000.1 | osa-miR1870-3p | Cleavage | 4.0 | 15.31 | 1 | 24 |
| Osa05LNT0321000.1 | osa-miR2097-3p | Cleavage | 3.5 | 20.5 | 1 | 22 |
| Osa05LNT0321000.1 | osa-miR2928 | Translation | 4.0 | 4.046 | 1 | 20 |
| Osa05LNT0321000.1 | osa-miR2930 | Cleavage | 4.5 | 12.206 | 1 | 22 |
| Osa05LNT0321000.1 | osa-miR3979-3p | Translation | 4.5 | 17.404 | 1 | 20 |
| Osa05LNT0321000.1 | osa-miR812o-3p | Translation | 4.5 | 18.097 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0321000.1 | 5 | tp5b | Morphological trait | Culm/leaf | RM26 | C1447 |
| Osa05LNT0321000.1 | 5 | qMRL5-1 | Morphological trait | Shoot/Seedling | RM26 | C1447 |
| Osa05LNT0321000.1 | 5 | qTDW5-1 | Morphological trait | Shoot/Seedling | RM26 | C1447 |
| Osa05LNT0321000.1 | 5 | qRFC-5 | Physiological trait | Eating quality | RG470 | RG474 |
| Osa05LNT0321000.1 | 5 | qRNw5 | Resistance or Tolerance | Other soil stress tolerance | C1447 | RM26 |
| Osa05LNT0321000.1 | 5 | qRSd5 | Resistance or Tolerance | Other soil stress tolerance | C1447 | RM26 |
| Osa05LNT0321000.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0321000.1 | 5 | QFla5 | Morphological trait | Culm/leaf | RG470 | RG346 |
| Osa05LNT0321000.1 | 5 | nan | Physiological trait | Eating quality | C246 | C1447 |
| Osa05LNT0321000.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0321000.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0321000.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)