© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0321100.1
TGCATGCAAAATAAACTGCACCAAGTTAACAATAACACAAACTGGAGTTTCAGGCTAAGTTACATTAGTTATTTCGCGCTCTCACCTCAACCGTGACAACAACGTTCATCGCAACAGGGAAAATCTAGCACGCATAAATAGAAAACCGCTACTTGCCAACTACGTGCTTCTCATATAAGGCGACGATGTCCTTCTTGTTGGGATTCTTCAGTTGCAGGAGTTGAGCACCAAACCCATGCTTAGTGAGCTCCTGCTTCAGCTTCAGCACAGTGAACTTGGTGTAGTCTTCAGTCTCCGTCTCCTGCGCTTGCTGGCTCCCGTTGTTAGTGTCTTCTCCTACAAATACAGAGCCACCGTCCTCGGTGTGATTGCTCTTAAACGGGCTCGTCGTGCTTTTTGATCGTTTCCTTCGCCTGCCAGTGTTGTCATCGTCGATATCCATATCATGGACAGACTCAGTAGCTTCACCCCTCAGGCGCCTTGCATGTGAGGCCTTAAGCTTGCTGTCCAGTGCGGTTTCATTGAACCGAACAGATGTCAGCTCTTGTTGGAGCATATCTAACTTGCTTTGAGTTGCCTGCAACTGCAGTGACAGAGCCTCAGCTCTCCTATTGGCCTCAGCGCAGGCTTCTCGTTCTGTCTCCAGTAGACTCTCAAGAACTTGAACTGTACTGGACCTTTGCTGGTTGCTCCGTTGCATCATCTCATCAATTTCCTTTTCCCGCTCGTCAACCCTTTGTTCAAGCGATGAAACCTTACATACAGCATCCTTCTCAGACTGACCAACTCGCTCAATTTCTTCCAGCATCTTATTCTTCTCTCTCTCCAGACCTTCAACCTGTCTCTCCATTCTTTCTATTAACGCAAGTCTCTCCATTGCTAGCCTCTGCGCTTCACCCTTATCCTTCTGGGAAGCAACAGCTTCTGCACGAGCTACGTCAGCCAATTCCGTTGCTCGTTTAGCCTCCCTTTCAGCTTCCTTGCACCGGCTGTCTGCCTCATCAAACCTCTTGCACTCTGTTAGATACTTCTCCTGAAGATGGTTTTTTTCTTGTTCCAAGATCTTCACTTCCTTCTCACGTGACTGAGCTTCAGTTCTAAAAGACTCCAAGCTAACAGTCAGTGATCTGATCTCTTCTTTCAAAGCCAGCGAATCTGACTCATGGTTCTTCAACTTTGCTTCAGTAGCCTCAAGCCTTGAGATCAAATTTGTGGCATGAATTTCGGTTTGGTTAATTTTTGTGTTTAATCTTGCGATCTCCTCTTCCTTCTCAGACAGTTGGCTAGCAAGTTCTGCCCTTAAAGCGTCTTCCCTTTCTTGCACTTTCTTATTAGTGCGTTCTTGTGCTACAGCTGCTCTTTGCAGAGCTGTTTTTGCCTCACTTACAGCAACTTCATATTTCCGTTTCCACTCCGATGCCTCTTCTTGAGCAGACTCAGCCTGTTCTCGCACAGCAGATAATCTGCCCTCACTGATATTTACCCTGGATTCCAGAGAAGCAATTTGAGACTTTAACTTACTTTCATCTGCCTTTTGCTGTAACAGATTGTGGTCGTATTTGTTCTTCCAATCAACAGATTCCCGTTTTGCATTGTCAAGAGCAGAAGACAAGCTCACACATCGTTCCTCCAACTTGCTACTCTTGGTCTGAAGTTCAGCAATACGTCCGGAGTAATCCCTTGAAATTTTCTGTTTATCATTGATAGATTCCTCATAGCGCCTTAGGTACTCAGCCCTATGCCCCTCACTTGCTTCGAGCTGCTTCCTAAGTAGTGCCAACTTATCATCATTTGAACTGCATTTCAATCTTAGGGAATTTCTTTCTGCATCTATATGCTCTATCTGTCTTCTGAAAAGATAAAGCACGGGGCCCGCCAAACACTGCTGTAAAAATGTAGCTAGTTTTTTCCATTTCCCTGGACCATAAGATTTTGACTCATACTCTGTAAGTAGGCCATCAATGAGCCTGACTATGTCATCCAACTTTGCATCAGGACGGTTGCATGCTGTCCGTATCTTTGACTCCATGCTCTGAATTCTATTCGAACATTGCAAATCAGCCTCTAGAAAAGTATTCCTTTTGTAGTCCTCAAAGGCCTTCTTGAGAGAAGTTTGAAGAAGCTTCTCAAATTTTGAACGAGCTAACCCGGCACCAACAGCAGAAGCATTGAAGACACTAACAGCCTTTTTCAATGCATCTTCATGTGCTTCTCTCATGGCATCCTCTTCTGCTGGTTTTCTCCGGTCAAAAGAAGAATTGTAGGTATCAATTGCAGAATCATATGCCCTTCGACATTCTGCTTCCTCCACACTCTGCCATGACGAAGATATCGTAGGTACTGCACCAGTATTGATCGCATCGAGAAATGATTGTGTCAGTCCAGAAAGGACAGGGCCTGTCAGGGTGCTAGCTCCAAGTTGTTTAGGCCTTGTTCGGTCAAAGACAAATTTTGTCAAAGCATCCAGACCAGATCTAAACTCTGGACGGAAGTTATTCAACGGAAGTTGATCAAGGCGCTGAAGATCTTTCTCATTATTCACAGGTCGCACAAGTGTAATGCATTCTCGATCCGGAAAAAGTGCACGGATGGACTCCCGTATCGCATTCTTAGAAGATACATCCCTTCCTCCACCTTGTACAGGCCTCAAAGCCAGTTCGAGGTAATCTCTTGGAGTAATTTTTCTGTTGTCTTCTGTCAAATCCAAGTAAAAGTCCCTCAGCAACCAAACAAAGACAGGTGAAAAGTGCCCTAGTTCAGATGCAGTGGACCTTCCACCTGAGGCCCTGACACGTATATGTTTGGTCATTTCTGTCACCAGTGAAAGGCGATCAAGTGCAGCTTCATCTATGCCTCCCATCTGGTTGTATATGAACATACTTGATAATAGAACAGCTAAAGAAAATATTTGAATACTGTAAGTGCCCGTTTGGTCATAAGCATCAATTCCTTCAGTATCCAACAATACAAGGTTGTATTCAGTCCCATCAAGACCAGTTCTCTTCAAAGGTGCACTCCACATCCAAAGTCCCTTGGTACAAGGACGATGTGTTGGCGCAACTTGAAAACCACTGCTTCGGCCTAGAAGCTGGTTAAGCACGAAGCTCTTGCCCTGGCGCGCGCGGCCGCAGACGGAGACGACGCCGACGGGGCCCTTGACGAGCTGCAGCGCCGCCACCGCCTCCGGGTCCATCACGAACTTCCCCTTCTCGTCGCAGTACACCAGCCGCAGCGGCCGCCCCGGTCCACCCCCACCCTCGCCGCCGTTCCTGACGGGTGCGTCGCCGCCCGCATCCCCCGCGCTGGGGCTCCCGCGGAGGCCGAGCATCTGTAGCATCGCGCCCCCCGCGCGCCGCCGGCAAGGGCACGCCGCCGCCGCTCGCCTCGCTCCGCTGGTTTCAAAATGGGAAGAGGGAAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0321100.1 | 5 | 28005538 | A | G |
| Osa05LNT0321100.1 | 5 | 28006979 | G | A |
| Osa05LNT0321100.1 | 5 | 28007079 | T | A |
| Osa05LNT0321100.1 | 5 | 28007363 | T | C |
| Osa05LNT0321100.1 | 5 | 28008035 | T | C |
| Osa05LNT0321100.1 | 5 | 28008479 | G | A |
| Osa05LNT0321100.1 | 5 | 28008593 | A | G |
| Osa05LNT0321100.1 | 5 | 28008750 | A | G |
| Osa05LNT0321100.1 | 5 | 28008941 | A | G |
| Osa05LNT0321100.1 | 5 | 28010044 | T | C |
| Osa05LNT0321100.1 | 5 | 28010381 | T | G |
| Osa05LNT0321100.1 | 5 | 28010839 | A | C |
| Osa05LNT0321100.1 | 5 | 28011414 | T | G |
| Osa05LNT0321100.1 | 5 | 28011533 | C | T |
| Osa05LNT0321100.1 | 5 | 28012005 | A | G |
| Osa05LNT0321100.1 | 5 | 28005312 | C | G |
| Osa05LNT0321100.1 | 5 | 28008186 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0321100.1 | osa-miR5820 | Cleavage | 4.0 | 5.331 | 1 | 21 |
| Osa05LNT0321100.1 | osa-miR5821 | Translation | 5.0 | 8.944 | 1 | 21 |
| Osa05LNT0321100.1 | osa-miR156a | Translation | 4.0 | 19.075 | 1 | 20 |
| Osa05LNT0321100.1 | osa-miR156b-5p | Translation | 4.0 | 19.075 | 1 | 20 |
| Osa05LNT0321100.1 | osa-miR156c-5p | Translation | 4.0 | 19.075 | 1 | 20 |
| Osa05LNT0321100.1 | osa-miR156d | Translation | 4.0 | 19.075 | 1 | 20 |
| Osa05LNT0321100.1 | osa-miR156e | Translation | 4.0 | 19.075 | 1 | 20 |
| Osa05LNT0321100.1 | osa-miR156f-5p | Translation | 4.0 | 19.075 | 1 | 20 |
| Osa05LNT0321100.1 | osa-miR156g-5p | Translation | 4.0 | 19.075 | 1 | 20 |
| Osa05LNT0321100.1 | osa-miR156h-5p | Translation | 4.0 | 19.075 | 1 | 20 |
| Osa05LNT0321100.1 | osa-miR156i | Translation | 4.0 | 19.075 | 1 | 20 |
| Osa05LNT0321100.1 | osa-miR156j-5p | Translation | 4.0 | 19.075 | 1 | 20 |
| Osa05LNT0321100.1 | osa-miR156l-5p | Translation | 5.0 | 19.075 | 1 | 21 |
| Osa05LNT0321100.1 | osa-miR416 | Cleavage | 4.0 | 18.477 | 1 | 21 |
| Osa05LNT0321100.1 | osa-miR535-5p | Translation | 4.5 | 13.919 | 1 | 21 |
| Osa05LNT0321100.1 | osa-miR1861c | Translation | 4.5 | 13.473 | 1 | 22 |
| Osa05LNT0321100.1 | osa-miR2093-5p | Translation | 5.0 | 5.637 | 1 | 20 |
| Osa05LNT0321100.1 | osa-miR5147 | Cleavage | 4.5 | 21.143 | 1 | 21 |
| Osa05LNT0321100.1 | osa-miR5338 | Translation | 3.5 | 15.757 | 1 | 21 |
| Osa05LNT0321100.1 | osa-miR5338 | Cleavage | 4.0 | 11.45 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0321100.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0321100.1 | 5 | QFla5 | Morphological trait | Culm/leaf | RG470 | RG346 |
| Osa05LNT0321100.1 | 5 | nan | Physiological trait | Eating quality | C246 | C1447 |
| Osa05LNT0321100.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0321100.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0321100.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Osa05LNT0321100.1 | 5 | tp5b | Morphological trait | Culm/leaf | RM26 | C1447 |
| Osa05LNT0321100.1 | 5 | qMRL5-1 | Morphological trait | Shoot/Seedling | RM26 | C1447 |
| Osa05LNT0321100.1 | 5 | qTDW5-1 | Morphological trait | Shoot/Seedling | RM26 | C1447 |
| Osa05LNT0321100.1 | 5 | qRFC-5 | Physiological trait | Eating quality | RG470 | RG474 |
| Osa05LNT0321100.1 | 5 | qRNw5 | Resistance or Tolerance | Other soil stress tolerance | C1447 | RM26 |
| Osa05LNT0321100.1 | 5 | qRSd5 | Resistance or Tolerance | Other soil stress tolerance | C1447 | RM26 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)