© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0321200.1
TTTTGATGACTGAGATGCTCTACGCAGCTGTGCCATGCATGCATTCCATCTTCATTAGGCTTCTGTACTGTGCATGCACTTCCCCTGGCTGGAAGCCTCTGCGTCCTCTTTGGTTTTGGACCACGTTTCATTCCATCTTTTCCTCTGATTCTTTCTGCAACATAAACGCCGGTCTTCCCAAACCACGGCCCAGTTTGTTCTATTAGCTAGTTCTCTGGCTGTTGTGATTATTTGTGTACCAAGGGTCCATAAATCATACATAAGCCTGCACTTTACTCACATCTTGCCGTGGGAGCTGCCCATGTTTCATTGGCTACAAGTAGTGCAAATAATGGTTAGAGGGGAACAGAATCAACAGATGCTAAGCAGGGCCAGATGATCAGACTGACGTAGCAACCACATTCCCCATAAAACATACCAAATACAACAGCAAAAGTTTAAATTTGTCCCTAGCTACAATAATTATCCAAAAGGGCAGTCATTTTCTAGAGCTTCATTCATTGCTGTCATCCTCGTCGTCAGTTAAATCCTCTATGTTTTCAGCGTCTGGAGCAGAAGGCCCTGACGAGCGTAATTCATCGATTTCAACCTGGAGGAGGGAATCACAGGTAACCCTTCCTACTTGTAAGACTCTTGGGCAACCTGCGATAGGGCACTTCGGAGGTTTTTGGTTTCTTATGTAATGCATAATTGGAACTTTTTCATATATGTGCCTACAATCCGCACACCGAACTGGCTCTGTCAATTGAATTACAGGCTTCCCAGTTAATGGGCACGTGACATTTAAGATGCTAGTTTGGGTACTGGTCATAAGAACATCCTCCTGTTCATCACCAGGCATTGGTTGGCCAGCATGGTGAACATTCCAAACTGCCTCTCTGAACTGCCGAATGAGCAGATGGTTCTCTACTGATGTTGATGAGTTCCCCTTGACCTTGTTAACCTCAGCCTCGATCAGCTTTTCGAAATCCGTCATCTGATTAGATGGCTGGTACGCCCCAGGCACCTTCCGGATCGCGTCGGCGTAGCACGTGCAATCTTCGCACGAAGCAACCAGTTCCAGCGCCGCCGCCTCAAGCTGCTTCACCTTGTCGGACTTGTTCTCCCTCTCGTAATCGACGGCGATGGACTTCATTTCGCCGATCGCCTTGCGAATCTCCGCGATAAGGGTTTCCGCCTCCGACGACTCCCTCTCGGCGGCGTTAGTGAGCTTGTTGACCACCGACGACATCTCCGGCGACCGGCGGCGATCTCCGCCGCGCCCGCTTTCCCGCGATTTGGTTTTGGTTTTGGTTTTCGAGGGAAAGAGAAAGCCGTCAGGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0321200.1 | 5 | 28035644 | A | C |
| Osa05LNT0321200.1 | 5 | 28036288 | G | A |
| Osa05LNT0321200.1 | 5 | 28036670 | T | C |
| Osa05LNT0321200.1 | 5 | 28037957 | A | G |
| Osa05LNT0321200.1 | 5 | 28038436 | T | C |
| Osa05LNT0321200.1 | 5 | 28038597 | A | G |
| Osa05LNT0321200.1 | 5 | 28038855 | A | G |
| Osa05LNT0321200.1 | 5 | 28039437 | A | C |
| Osa05LNT0321200.1 | 5 | 28040031 | G | C |
| Osa05LNT0321200.1 | 5 | 28041905 | A | T |
| Osa05LNT0321200.1 | 5 | 28042634 | T | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0321200.1 | osa-miR5810 | Cleavage | 3.5 | 18.986 | 1 | 24 |
| Osa05LNT0321200.1 | osa-miR166g-5p | Translation | 4.5 | 11.856 | 1 | 21 |
| Osa05LNT0321200.1 | osa-miR166i-5p | Translation | 5.0 | 11.856 | 1 | 21 |
| Osa05LNT0321200.1 | osa-miR440 | Translation | 4.5 | 21.9 | 1 | 24 |
| Osa05LNT0321200.1 | osa-miR528-3p | Translation | 3.0 | 17.455 | 1 | 21 |
| Osa05LNT0321200.1 | osa-miR3979-5p | Cleavage | 4.0 | 17.827 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0321200.1 | 5 | QFla5 | Morphological trait | Culm/leaf | RG470 | RG346 |
| Osa05LNT0321200.1 | 5 | nan | Physiological trait | Eating quality | C246 | C1447 |
| Osa05LNT0321200.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0321200.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0321200.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Osa05LNT0321200.1 | 5 | tp5b | Morphological trait | Culm/leaf | RM26 | C1447 |
| Osa05LNT0321200.1 | 5 | qMRL5-1 | Morphological trait | Shoot/Seedling | RM26 | C1447 |
| Osa05LNT0321200.1 | 5 | qTDW5-1 | Morphological trait | Shoot/Seedling | RM26 | C1447 |
| Osa05LNT0321200.1 | 5 | qRFC-5 | Physiological trait | Eating quality | RG470 | RG474 |
| Osa05LNT0321200.1 | 5 | qRSd5 | Resistance or Tolerance | Other soil stress tolerance | C1447 | RM26 |
| Osa05LNT0321200.1 | 5 | qRNw5 | Resistance or Tolerance | Other soil stress tolerance | C1447 | RM26 |
| Osa05LNT0321200.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)