© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0321400.1
ACCAAATAATCCGCCGTCTCAATTTTTTGGCGAATGATTCATTTTCGGAGTATGCTTTTGCAGGTTTACACAAGAAGCAACAGCTTCTAGCAAGAAAACAAGAAAAAAAAATCAAGGGTTGCAGGTATGTACACAAGCCCAGCCTAGTGCTGTTATTCACATTTTCTCCTTTTCTCCACAACAAATAAAGTGCGAGAAATTCCACCATGAACTTTCTCTCCCTCTTTTCCTCTTTCACCATCGCGAGCTCACTGCCATTTCAAATGGACAATGGCCGCCTGAGATGGAATAGGAGTTTCCCTTCTCCTTTCTTCAACCTTCGCCTGCATCCATGACCAGATGCGACCAATTCCCTTGCCAGCCTTATATCTGGGTGGATGGGCACAACACAAAGCCATGCTCCGGCATTCCCATCTTGCTCATCTATGGAGCAATTCCACAACTGCCTGACTAAAACTCTAGTACATCCTTGAAACACCATATTGAACGGCACCAACCTTGCTGTATCCACCAGCAACTGCTGCGATGCCGTTGAACGGAGCAATGCCGTATAGCATGCTCCCCTGGAGTGCAGCCCTGTCTGTTAGATCAGTTCTGGGAGCACTCCTCGTAAAGTAGTATTGTGAAGACCGTATGTCCGGGGCTGTATCTGGAGCAACTTTAGCATCCATCAAGTGTTGTGCAGGCCTGTACTGCACACGATCTTTCTCAAGCTCTTCCTGATGTTGCCTATCAGAGTAGTCTGACTTTAGGTTGTAGCTGTATCCTGACTTGTTGGCAGCTGCTGGAGGAACCATCGGATTCCTCACCACCCTCCGTGCGCTGTGCGGATCTGCGGCGCCTGGATTCTCGAATGGTAATACCGGACCAACCGTTCTTCCTGGTCTAGCTGTTGGGATCCTTTGAGTAACTTGGGATGTTGCATCTAGGCCTTCATTTGGAGGAATTGATGTAGAGTGAACTGTTGTAGCCCTTGGAAGAGAAACATGCTTCCTATCTAGTGCACCACTCTTTCCTCCGTTTTCCTCTAAGATGGCAAATTGCCTCCGGAAATTATCAACAGCACTTGGATATAGAAAGCTCGTGTTTTCGGAGCCATTCATGTAATCCTTCAGAAGCTGAGGATGATACTCTAATATCTCACGGAATATAAGTTCCTTGATATCATCTTTGGTAACCTTTCTTCGCTCAAACTCAAACTCCATTTTTGAAATTGGTTGGCATGATGGTTCTCTCTCCACTTTTGCAAGGCCTTTAAAATATGGATCAGCCAACGCCTCTTCTGCAGTAGGTCGATCCTTCGGATCAAATGCTAGAAGCCTTTGTAAGAGCTTGAGTGCCAAAGGATCTACATTTGGGAACTTTTCTGAAAAAGGTACTGGCTGCTTCCTCCTCATGCTGCTCAGATACCTCCTTGCCTTGTCATTCCGAATCCTTGAAATAGCATCCATTGATGGTGTACCCAAGAGATCAGTCATCAAGTCCAATTGATGAACCACATTTTTACCAGGGAACAAAGGTTTTCCAGTCAAAATCTCCGCAAAAATGCAACCAATACTCCATGTATCTATAGCTGGTGAATACTTAGAAAAGAAAGACCCACACAGCTCAGGAGCCCTGTACCATCTAGTTGCAACGTAGTCCGTCCAGAAAACTGTTGTAGGAGTGTCATTAAATGCAACTCTTGCTAGTCCAAAATCACATATCTTGAGCTTACAGTTAGCATTTGCTAATATATTTTTGGGCTTTAAATCACGATGATAAACATTAGCAGTATGGATATATTTCAATGCTCGAAGCATTTGATACAGAAAGAACTGATGATGTTCCTTCGTTAAGTCATCATTAGCCTTAATAACCTGGTGGAGGTCTGTATCCATCAGTTCGAAGACAACATAAATATCTTTGAAGTCCCTTCTAGATGGAGGTAACATTATATGTTTGATCTCGACAATATCAGGATGCCGTAAAAGCCGGAGAAGTTTGATCTCACGGAGGATCCTAGCAGCATCAGATAGATGCTCAAAGATATTGTGTATTTTCTTGATTGCTACTTTGTCACCGGTATGTTGGTCAATAGCTGAACAAACAACTCCATAACTTCCTTTACCAACGATTTCTTGAATTTTGTATCGGCTGGAGTCACCATATTCACTGAAGAAATCCATCTCTGTTGTGTTCTCTACTCCCGGCTCCCGCTGTGGTGAACTAATGATCGCCCTAATTCTTGACAAGTCTAATGATCAGTCTGGAAAAGATACACCTTTGGCTCAAACCTATAAGTAAAAATATACCTCCTTTTTTTTAAGTGGGCAAAGATATCTACAGTGCTATATCCCGGAAAGAAAATACAGCTTGCTTGGATTAGGATAAACTTACCCATTACCCCAAGATTTTGAACCAAACAAGAATTACCGTGTTATTACGGGCTAATAGTAGCGTTTATACAAGTCAATCAGCCTTGTAGTAGGAGACTACGTTTTAAGGAAAGAGATAAATGGCTTCTTGCAGATGCACAGGAAAGATTTCAGGAAACGCTCGCAAAGCTCAGGTAGGATAGGATATGATAGGATAGGATCTTCCTACAAGGCAAGAATCCGCTCCAAATCCGGGAGCAATTTCCTGACGCCGTTTACGCTCACGCGCAGGAGCAGGACACCAAACTTCTTCGGATCAGAACCCACAATCCCCCAAAAAAAACAAAAAAAAACACCAATTCGTCCAGCCTATCCAAGTTCAGATGAACACGGCGACGAACCCCAAGAACCCAGAGAAACAAAACGAAGCAGCAGCGAAATCTTTAGTGTTCTCCCACGGCCACCACCCACCTTGCTCCGCTGCTCCGCCGCCGGCGCCGCCCGCCCACCCGCATTTGCCTCAGGCATCGCGAGACGGCCGCCGGGGAGATCTCGCCGGGAGAAAATCCAAGCCTCGCCGCTCGAATCCGCAGCGATGTGGAGGATGAGGAGAAGGAGAAGAAGAAGCAGCCGAGCCGAGTAGTGTAGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0321400.1 | 5 | 28189745 | A | G |
| Osa05LNT0321400.1 | 5 | 28190416 | T | C |
| Osa05LNT0321400.1 | 5 | 28190477 | G | T |
| Osa05LNT0321400.1 | 5 | 28192735 | A | G |
| Osa05LNT0321400.1 | 5 | 28192978 | T | C |
| Osa05LNT0321400.1 | 5 | 28193759 | T | C |
| Osa05LNT0321400.1 | 5 | 28190614 | G | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0321400.1 | osa-miR6254 | Translation | 4.0 | 17.553 | 1 | 21 |
| Osa05LNT0321400.1 | osa-miR166l-5p | Translation | 4.0 | 13.441 | 1 | 21 |
| Osa05LNT0321400.1 | osa-miR167d-3p | Translation | 4.5 | 13.67 | 1 | 22 |
| Osa05LNT0321400.1 | osa-miR166g-5p | Cleavage | 5.0 | 12.51 | 1 | 21 |
| Osa05LNT0321400.1 | osa-miR419 | Cleavage | 4.5 | 22.806 | 1 | 21 |
| Osa05LNT0321400.1 | osa-miR1858a | Cleavage | 4.5 | 16.892 | 1 | 21 |
| Osa05LNT0321400.1 | osa-miR1858a | Translation | 4.5 | 12.313 | 1 | 21 |
| Osa05LNT0321400.1 | osa-miR1858b | Cleavage | 4.5 | 16.892 | 1 | 21 |
| Osa05LNT0321400.1 | osa-miR1858b | Translation | 4.5 | 12.313 | 1 | 21 |
| Osa05LNT0321400.1 | osa-miR2092-3p | Translation | 4.5 | 15.752 | 1 | 22 |
| Osa05LNT0321400.1 | osa-miR2096-3p | Cleavage | 5.0 | 17.128 | 1 | 21 |
| Osa05LNT0321400.1 | osa-miR396f-3p | Cleavage | 5.0 | 11.48 | 1 | 24 |
| Osa05LNT0321400.1 | osa-miR2905 | Translation | 4.0 | 15.015 | 1 | 21 |
| Osa05LNT0321400.1 | osa-miR3981-5p | Translation | 5.0 | 17.001 | 1 | 21 |
| Osa05LNT0321400.1 | osa-miR5488 | Translation | 4.0 | 17.871 | 1 | 21 |
| Osa05LNT0321400.1 | osa-miR5489 | Translation | 5.0 | 20.251 | 1 | 21 |
| Osa05LNT0321400.1 | osa-miR5515 | Translation | 5.0 | 19.879 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0321400.1 | 5 | qRFC-5 | Physiological trait | Eating quality | RG470 | RG474 |
| Osa05LNT0321400.1 | 5 | qRNw5 | Resistance or Tolerance | Other soil stress tolerance | C1447 | RM26 |
| Osa05LNT0321400.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0321400.1 | 5 | qRSd5 | Resistance or Tolerance | Other soil stress tolerance | C1447 | RM26 |
| Osa05LNT0321400.1 | 5 | nan | Physiological trait | Eating quality | C246 | C1447 |
| Osa05LNT0321400.1 | 5 | QFla5 | Morphological trait | Culm/leaf | RG470 | RG346 |
| Osa05LNT0321400.1 | 5 | tp5b | Morphological trait | Culm/leaf | RM26 | C1447 |
| Osa05LNT0321400.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0321400.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0321400.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Osa05LNT0321400.1 | 5 | qTDW5-1 | Morphological trait | Shoot/Seedling | RM26 | C1447 |
| Osa05LNT0321400.1 | 5 | qMRL5-1 | Morphological trait | Shoot/Seedling | RM26 | C1447 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)