© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa05LNT0322000.1
TTAAACCCGGAGGAGGTAGACACTGAGCTCAGGACCGCCACTGTTGCTGTTGCTGCTGGTGCTTGTGCTGTCCGGGTTCATCATGTAGAATGCCTCCGAGTCGCGCGAGCCCACCACCCGCTCGAACCGCGCGCGCATGTACATGACGTCGCCCTCGCCGCCGCCGCAGCTGGCGGCGGGTATGACGCCGGCGCCCATGGACACCGGCTCCAGCGCGCGCAGCACGCGCCAGTCGGCGGCGCCGCACTCGCGGCGCACCGCGTAGCCGCAGCTCTTGCCGTTGCAGTACGCGCGCCACACCGTCTCCTCGAGCAGCCTCTTCCCGCCGCCCGTCGCGGTGGGCAGGGCGGGGGCGGGGCCGCCCTTGGCGCGCTCGCACTCGAGCGCGATGCGCACAAGGCCCGAGGCCATCTCGCGCACCAGCGCGGCGGTGGGCGCGGCGAGCTCCAGCAGCAGCGCCGGGCACGCGCGCGGGTCGAGCTGGAACGCGAGGTGCACGTGGCCGCGCCGGTGGCCGTAGAGCGTGCCGGTGAGCCGCGCGCCGAGGCCGACCTGCCGGTGCCGCCCCGTCACGGCCGCCGCCAGCGCCGAGCGCAGGCGCGACACGGCCGTGCGGACCTTCCTACGCTGCGGCGGATGCTGCTGCTGAGGATGCTGCTGCCGCGGCGGCTTCTTGGGAGGAGAAACGAAGTCCTCAGAATGGAAACTCGGACAGACAGAGGAGAACGCCATTGTCGCCTCATCCTCCTCCTCTTCAGCTTCCGAGCTCTTCATGTAATCCTCCTCCCCTCTCGTGGCGCCATGGCTGTAGCTCTTGCCAAGAACCGGCCACTTGAAATGCCTCCTCTTCAGAAGGGACTAATTCGGTGTGCCAGCTTTATTTGCCACTCAGAAACCAGCCGGCCTGGGATAGGTGCCAATGCATCCTTCTCACGTGCATCTGCATCATCAGCATGGATAACAGAAATAACGTCTTCAACCAGTTTGTCCCTGCCACCCCTTAGTGGATCCTGTAAAAATACATCAGTATGTGTTTTCCCTTCATAGAGTAGTAACTTGGCTTTAGCACCAGCTTGTTTAAGGACACCCGCAAAAGTTTCACTAGCAGAAAATGGTATAGAATAATCATCCGTTCCATGCAAAAGCACAATCTGAGGAAGAAGAGCTATTGTTTCAGGACATAATTTCTTGGCAACAGTTTCTGGAGAGAAATGTGGCAATGATTTCTTTCCCTCCATTATGCTGAGAAATATTGAACGGTAAAGACCACGTTCATGGAAATGATCAACCAAATTTTCAATGTTGTATCCTCCAGACAAACCAAAGTATGCTTTTATTTGAGTAACACTCCATGAAATCTGCTCTCCCCTAGATTCTTTAGCCGCTTGTTCCAAAAGAGCGCATGCTGCGATATGTGCTCCTGCTGATTGACCCATTAAGTATATCTGATTAGGATCTCCTCCATAGGCACCAACAGTCTCACAAACAAATGAAATCCCATCAGAAGCATCGCTAACCATGTCACTTATTGTTCCTTGAGGAAAATTCCTGTAATCAATGCATGCAACTATAATTCCTCGCTCTGCTAACCTCCTTCCAAGAAGAGCACCCCACGCCTTGTAACCAATGATCCATGCACCACCAGTAACAAATGCAACAACTGGACTGGGTTTTTTGGGGTCTCTTGGTATGTAAAGATCCAACCTATTTCTTGGTTGATCCCCATAGATCACGCTCCTCAAAACTTGTCTTGAAAAGAAATAATAATACCCAACTCTTATGAAACCGGGCATAAGTAAAATTGCATATATTATGAGGGCAGCGAGCTGAGAAATCCACCGGTAGCCTACCCCGAGGTATCGGAGGAGGATGAAGGCGAGGCGCGTGACGAGGTACGTCTCGGCGGCGGCATGGCTGACGTCCTCCCGGAACGTGGACCTCCTCTCGCCGCCCCCGCGGCTGCCGGGGGCGAGCGGAGAGTCGGGGGAGAAGGGCACGGAACGCCGGCGCACGAGGACCTGGGGGGCACCGCGTGGAGGTACCGCCTCCGCCACGGGGCCCGCGTCACCGGAGACCGGACTCGCGGGCTGCATTGCGGGGCGGACGACGACGACGATGCTAGCTCCTGGTGGCGAGGGATTTGGGGTTGCCGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa05LNT0322000.1 | 5 | 28744461 | T | C |
| Osa05LNT0322000.1 | 5 | 28745479 | A | C |
| Osa05LNT0322000.1 | 5 | 28745923 | C | T |
| Osa05LNT0322000.1 | 5 | 28746045 | C | A |
| Osa05LNT0322000.1 | 5 | 28746620 | C | T |
| Osa05LNT0322000.1 | 5 | 28749975 | C | T |
| Osa05LNT0322000.1 | 5 | 28750867 | T | A |
| Osa05LNT0322000.1 | 5 | 28749332 | G | A |
| Osa05LNT0322000.1 | 5 | 28747999 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa05LNT0322000.1 | osa-miR6249a | Cleavage | 4.0 | 14.038 | 1 | 21 |
| Osa05LNT0322000.1 | osa-miR6249b | Cleavage | 4.0 | 14.038 | 1 | 21 |
| Osa05LNT0322000.1 | osa-miR1320-5p | Translation | 4.5 | 12.124 | 1 | 21 |
| Osa05LNT0322000.1 | osa-miR5160 | Translation | 5.0 | 20.556 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa05LNT0322000.1 | 5 | qRFC-5 | Physiological trait | Eating quality | RG470 | RG474 |
| Osa05LNT0322000.1 | 5 | QFla5 | Morphological trait | Culm/leaf | RG470 | RG346 |
| Osa05LNT0322000.1 | 5 | qRNw5 | Resistance or Tolerance | Other soil stress tolerance | C1447 | RM26 |
| Osa05LNT0322000.1 | 5 | qRSd5 | Resistance or Tolerance | Other soil stress tolerance | C1447 | RM26 |
| Osa05LNT0322000.1 | 5 | QPl5 | Morphological trait | Panicle/flower | RG13 | RG346 |
| Osa05LNT0322000.1 | 5 | nan | Physiological trait | Eating quality | C246 | C1447 |
| Osa05LNT0322000.1 | 5 | qMRL5-1 | Morphological trait | Shoot/Seedling | RM26 | C1447 |
| Osa05LNT0322000.1 | 5 | qTDW5-1 | Morphological trait | Shoot/Seedling | RM26 | C1447 |
| Osa05LNT0322000.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0322000.1 | 5 | nan | Morphological trait | Seed | RM163 | RM31 |
| Osa05LNT0322000.1 | 5 | nan | Physiological trait | Eating quality | RM163 | RM31 |
| Osa05LNT0322000.1 | 5 | tp5b | Morphological trait | Culm/leaf | RM26 | C1447 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)