© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0029600.1
CTGCAGAATAGTGCTACAATAAACTCATCTCAAGCTTCACCTTAGAGTACATGCTTGACACGGTAACACATTAAAACTGATGTGCAGTCTTACAAGGAAATCATTATACCCAAAAGTCAACTTCTAAATGAGTAATCTATTTGAAGAAAAATATGAATCACTTCTATCTGAACAGAACTACGAATCACTATACCACAAAGTAAACAAAATTTCTGTAGTACTATGGTTGAGTTTATACAAGTCTCTTGGAGCATCGCAACCTGATGCTTGTTTTGAAACACCATGATGAGTATTGTCAAGATGATGTAATAGCCTAGGAGATTACGTTGCGGTGTTCCTGAAAAAAAGCTCCTAATCAAAGATCTTCAAAATCATGATCTCCTTGACATTCCATCCGAAACCAGTGAACCGGATCCATCAATTGAAGTTGTGGTTGTGTGGGATGGTCCTGAGGCATCATTATCATCCATAGCAGGAGGTGGAATACCAGCAAGTTTGGACACGACACTGCGCAACCAATCAAGTTGCTTTTGTTGAGATTCAAGCTGATTTTGTTATACTGCAAGCTGGTTTTGTTGAACTGCCACAGTTTGTTCTGTAGAAGCCAATTCTTCTTCCATTTGTTGATAGGTGTTTGCTGAAGTTGATGAAGCTCTTCTATTAGGTTTCGGACCATGACCTCTCCCTCTAATATATCCATATGCCTTCCCAAGCACCTTCTCACAAATTTGTTGCTCTGTCAGCTGGATTGCACCTTCTTGCTCATTTTCATGCTGCATCTGTAACATTGTTTCATAGTTCTGTCTAGCATCTCTTGACGCCCATCCTTTGTCACTACAATAGCATTCCTTGTACAATGAGATTTGATCACAACTTAATTCATGCTGAAGTGCCACAAATGGTTTGGTTCCCTTTTTATGAACATATGCCAGTTTCATCCGATTAGCTTTCCCTATAACTGATTTTTTCTGAAATTCTTCTGTTTCGAAATGATCACAAAGCCAAGTCCAATAACCAGGTCTGTCACGAAGGGGTTCATATGGACTGTTACGAGCACTGTCCCCACCACCAGACTTGAGATAATGAGTATAGCATCTATGGTGAAATGTTTTATAGCTTGACGAAAATAGTAGCTCCAGACAGCCTTTAACATGAGGTTCAGATAGATCTAAGTTGAATTTCATCTTCAGAAGCTCATACAAAGGTTCTTTGTCAGCCTCACTAAAATTGTTCCAACCAATGCGTTTGATAGGTGCATGGTACCTAGTAACAATCCCAATCTCCCTTGAAAGTAGTTCATGATTTTCTCCAATTGGCCTCCTCTCTACTGAAATATTCAAGTTCAGTGGGTGACCAGCTTTTTTGATCAGGCGCTCCAAACCTTTTGATTTATTCTTTCCGCGCACTTTCTTGGAGTTGGAAGTAGAAACATGCTGAGTTTGTGGGCAATTAGATGGTTGTGAGTTTCTTGGAGGCCGAACTTTCTGTCCAGGTGCCATATGCAGTGATGTATAATAGAATCATAAGAAATCTAATTCTCAGTTTCTTCTTCACATTCACTTCGAGAAACAGGACCCTCCTTTAAAGATGCTATCTCTTTTGAATCACTAACAATTTCTAGAATCACATCATCGCGACTCAATGTATTAGCTTCAAAAGTATCATCCAGAACAATATCACCACCCTCTTCTTCTTGAAAGGCAATATCTTCATTAGCACCGATGTCTAAAGCACTTTCACTCCCAGCACTCCAAACCTCTGGATCAAATAGGTGCCGATGGTTAACCTTTTGCACTACTTGCCAATTCCCCTTCAATTTAGTATCAGGTACATAAAAGACCTGCTTAACTTGACTAGCCAATACATAATTGTCATCTGTGTACCACCTTTTGCTTATATTAATACTAACAAAGTCATTGTCAATGATCACTGGTTTGTTTCTCTCCAGATTGTACCAATCACACATAAACAATGCAACTTGCCGATCATTAGGATAATCCAAGACATATATGTCTGTGAGAGTACCATAGTATGTTATGATTTTCCCTTTATGTGGACCCTCAACGCATACTCCACTGTTTTGAGTTTTTCGACCTTCCTCCCGCTCCTTTGTTAAAAATCTAACTCCACCAATAATACATCCAGAGTATTTATGTACTTTTTTGTGTGGTCCAATTGCAAGGGCATATAAACAATCAGATACTTGGGATGAACCATCCTTGCGCAAATCTATAACTCTTTGGCGCAGCCATGTAGCAAACTCTTGTTGCAGTCTATTTGCTATATTTCCCACGCCTTGTGCCTCTAAAACGTCCTCATGCTCATATAGGAACCCTTGCAGTTCTTCACAATTATTGAGCACGTACCAACACAGGGAATTATATTGATCTTGTGTTAGGATTACGTCATCCTTGTGACCAAAAGCACAGAATCTAGATAAAAATATTGAGTAGCGATCAGCGAATTGCCTCTCTCCATCATAGTTTCTCTCTTCCCTATTGAACCTTGTCTCAATTCCATTGAGATACATAGAGCAAAATGTTGAGCACTCCTTCATAATATAGGCTTCCGCGATTGAACCCTCTGGATGTGCCCTATTGCTCACCATGCCTTTCAAAGTACCAAGGAACCTTTCAATAAAAAACATCCATCTATACTGTACAGGTCCACCAAGTCTTGCTTGTTGTGGTAAATGGACTGCTAAGTGTACCACAATATCAAAAAATGCAGGTGGAAAAATCATTTCCAATTTTCACAACACAAATATTATTTGTTCTTCTAACTTTTCCAGCACATCAAGCTTCAATGACTTAGAGCATAGTTGACGAAAAAAGCTACCTAACTGTAATAGTGCATCACAAATGTCATTCTGCAAATACCCTCGAATTCCAATTGGAAGTATTCGCTGCAAAAGCAGATGGAAGTCATGTGTCTTCAACCCAGTTATTTTCCCCTCTTTATAGCTTAGACCTTTTGATATATTTGCACCAAAACCATCAGGAAAGCGGACAGATTCTATAAATTGAAAAAAATCTTGTCTCTCCTCTTGGGATAGTGTATAACAAGCAGGAGGCTTTATGACATTGCTGCCCCTTTGTTGCAAGTGTAGCTCTTTCCGGATGTTTATGTCTTGCAAGTCCATGCGAGCCTTAAGTGTGTCTTTAGTCTTACCATTTATGTTCAAAAGAGTTCCAAGCACGCTCTCACAAATATTTTTCTCAATATGCATGACATCTAGGTTGTGTGGCAACTTGAGTTCCTTCCAGTACGGCAACTCATACAAAATGCTGATCTTAGTAAAATTCTTTCCTGGGATGTCCCTTTCTGAGGTCTTTCTTTTCTTATTTCCATCATGCTTTCCATACTTGAAGCCTTGTAGATGATCTAATTTTTGTAGCATTGCAAAATTTTCATCTCCTGATAGCTGTCTTGGCCTCAATGATGTTTCATTCTTGCCATTAAAGTTCTTACTTCTTCGCCATCTATACTGAATAGGCAAGTATCTTCTATGACCCAAAAAACCAATCTTGCTTCTTAGCGAACACGAATCAGTCCAATCTAAACATATCGGGCAAGCCTTATAGCCCATTGCCACATACCCAGATAGTGAATCTAATGCACGAAGGTCACTAATAGTGCCTAGCACTACTGCTCGTAGATTGAAAGTATCTCCTACAAAGGCATCATATGTACTGACTCCAGTGTTAAAGAGTAGATTCAATTCTTCAATCAAGGGCCTCATGTACACATCAATATCCCTTCCAGGTGCTTTCTTCCCTGGAATCAGCAAGGGCATTAATATGAAGGGTTCCTTCATGCACTTCCATGGTGGCAGGTTGTATACAACTAATATAATAGGCCACACACTATAAGAGCTACTCAAAGTTCCAAATGGGTTGAACCCATCTGTAGCAAGTCCAAAGCGCAAATGGCGAGGATCGTGCGCAAGCCATTGGTATTTTCCATCCAAATCCTTCCAAGCTTCGCCATCAGCTGGATGTCTCAAGACATTTTCCTCAATTACACGCTTATCACGATGATATCTTAAGTCTGAGGCTATGTCCTTGTTCATAAATAGTCTCTGTAACCTAGGGATCAAAGGAAAATATCGCAAAACTTTGTGAGGTACACGTTTCTTTCCCTTGTGAATTTTCCATCTTGATTCATTACAAACAGGGCACTTATCATAGTCTTCAAGTTCCTTCCAGAACAATACACAATCATTGATGCATGCATGTATGCTTTCATAGCCCAGCCCTAGATCTCTTAACATCTTTTTTGCTTCATAATATGAGGCTGGAAGTGTGTCACCTGTTGGCAAAGCTTCTTTCAATAATTTGAGTAGCATCTCAAATGATTTGTTAGTCCAATGGTTTAAATCTTTTAAGTGGACTAACTTCAACAAGAAGGATAACAGTGAATGACCTCTGCATCCTGGGTACAACTCTCTTTGTGCATTTCTTAGCAAGTTATCAAAACGGACTGCCTCTTGATTAGATTAGAGGACATTATCTCCATTATTACCACTTTGGTTCTCCTGCTCTGCAACCCCAATTGTGGCCCTATGGATATCACCTAATAGATCTTGAATAGTATCAAATCCATCAAACTCATCCCCATTATCTTCATCCTCTAAAAGTTCATCGTCCTGATCATAATTGTTGGCCACTTCTCCATGGAATACCCATTTTGTATATGATAATTGTATACCATACAACACCAAATGTGTTCGAGCATCATTGGCACCCATCTGACTTATATTCAAACACCTTTCGCATGGGAAAAATATAAAACTGTTCTCTCCATTGTGTTCACAAGCAAATTCAATAAATGCGTTTACCCCAGCAATATACTCCCTAGAGAACCTATCGGGCAATCTCATCCAACTCTTGTCCATATTCTAATCCTCTTGAATCAAAGTGGAGACTCCTCCTGCTGCCTGCAATGAATCAACTGCTTGCCCCGACGACGTTGTAGCTAAACCACCAGCGATCCCTCGGGCGCTGCCATCGCAGAGACCACCGATTCCTGGGCGCTAGCACAGGGGCCGCGAAGGACTCCTCCACCGAGCGCCGGCGGCGGCGGCGGCGTCGTCGCCGCAAAACTCCGTCGACGGTGCCGCCGCCGGCCGCAGATCTCGCCTCGCCGCCGCCGCCGCCGCCGCAGGAGACCTTTCCCTTGCCTCTCGATTTGTTTCTGGATGGGGATCGGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0029600.1 | 1 | 26283000 | C | G |
| Osa01LNT0029600.1 | 1 | 26278505 | A | T |
| Osa01LNT0029600.1 | 1 | 26278768 | C | T |
| Osa01LNT0029600.1 | 1 | 26279675 | A | G |
| Osa01LNT0029600.1 | 1 | 26279784 | T | C |
| Osa01LNT0029600.1 | 1 | 26280737 | C | T |
| Osa01LNT0029600.1 | 1 | 26282587 | C | T |
| Osa01LNT0029600.1 | 1 | 26282882 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0029600.1 | osa-miR5534a | Translation | 4.5 | 23.099 | 1 | 21 |
| Osa01LNT0029600.1 | osa-miR5541 | Cleavage | 5.0 | 14.3 | 1 | 21 |
| Osa01LNT0029600.1 | osa-miR5815 | Cleavage | 4.0 | 14.937 | 1 | 24 |
| Osa01LNT0029600.1 | osa-miR5816 | Cleavage | 4.5 | 12.697 | 1 | 24 |
| Osa01LNT0029600.1 | osa-miR5816 | Cleavage | 4.5 | 16.46 | 1 | 24 |
| Osa01LNT0029600.1 | osa-miR5823 | Cleavage | 3.5 | 15.795 | 1 | 24 |
| Osa01LNT0029600.1 | osa-miR6248 | Cleavage | 4.5 | 4.927 | 1 | 21 |
| Osa01LNT0029600.1 | osa-miR5079b | Cleavage | 4.0 | 13.686 | 1 | 22 |
| Osa01LNT0029600.1 | osa-miR395b | Translation | 5.0 | 22.868 | 1 | 21 |
| Osa01LNT0029600.1 | osa-miR395d | Translation | 5.0 | 22.868 | 1 | 21 |
| Osa01LNT0029600.1 | osa-miR395e | Translation | 5.0 | 22.868 | 1 | 21 |
| Osa01LNT0029600.1 | osa-miR395g | Translation | 5.0 | 22.868 | 1 | 21 |
| Osa01LNT0029600.1 | osa-miR395h | Translation | 5.0 | 22.868 | 1 | 21 |
| Osa01LNT0029600.1 | osa-miR395i | Translation | 5.0 | 22.868 | 1 | 21 |
| Osa01LNT0029600.1 | osa-miR395j | Translation | 5.0 | 22.868 | 1 | 21 |
| Osa01LNT0029600.1 | osa-miR395k | Translation | 5.0 | 22.868 | 1 | 21 |
| Osa01LNT0029600.1 | osa-miR395l | Translation | 5.0 | 22.868 | 1 | 21 |
| Osa01LNT0029600.1 | osa-miR395s | Translation | 5.0 | 22.868 | 1 | 21 |
| Osa01LNT0029600.1 | osa-miR395c | Translation | 4.5 | 22.868 | 1 | 21 |
| Osa01LNT0029600.1 | osa-miR395a | Translation | 4.5 | 22.868 | 1 | 21 |
| Osa01LNT0029600.1 | osa-miR396c-3p | Translation | 4.5 | 16.16 | 1 | 21 |
| Osa01LNT0029600.1 | osa-miR395m | Translation | 5.0 | 22.868 | 1 | 21 |
| Osa01LNT0029600.1 | osa-miR395n | Translation | 5.0 | 22.868 | 1 | 21 |
| Osa01LNT0029600.1 | osa-miR395o | Translation | 4.5 | 22.868 | 1 | 21 |
| Osa01LNT0029600.1 | osa-miR395p | Translation | 5.0 | 22.868 | 1 | 21 |
| Osa01LNT0029600.1 | osa-miR395q | Translation | 5.0 | 22.868 | 1 | 21 |
| Osa01LNT0029600.1 | osa-miR395r | Translation | 5.0 | 22.868 | 1 | 21 |
| Osa01LNT0029600.1 | osa-miR814a | Translation | 5.0 | 10.699 | 1 | 22 |
| Osa01LNT0029600.1 | osa-miR814b | Translation | 5.0 | 10.699 | 1 | 22 |
| Osa01LNT0029600.1 | osa-miR814c | Translation | 5.0 | 10.699 | 1 | 22 |
| Osa01LNT0029600.1 | osa-miR1423-3p | Translation | 4.0 | 20.787 | 1 | 21 |
| Osa01LNT0029600.1 | osa-miR1860-5p | Cleavage | 4.5 | 21.36 | 1 | 21 |
| Osa01LNT0029600.1 | osa-miR1320-5p | Cleavage | 3.5 | 12.482 | 1 | 21 |
| Osa01LNT0029600.1 | osa-miR2867-5p | Cleavage | 4.0 | 19.054 | 1 | 22 |
| Osa01LNT0029600.1 | osa-miR2905 | Translation | 4.5 | 18.987 | 1 | 21 |
| Osa01LNT0029600.1 | osa-miR2929 | Cleavage | 5.0 | 11.456 | 1 | 21 |
| Osa01LNT0029600.1 | osa-miR395y | Translation | 5.0 | 22.868 | 1 | 21 |
| Osa01LNT0029600.1 | osa-miR1862f | Cleavage | 4.5 | 6.888 | 1 | 20 |
| Osa01LNT0029600.1 | osa-miR1862f | Cleavage | 5.0 | 11.52 | 1 | 20 |
| Osa01LNT0029600.1 | osa-miR1862g | Cleavage | 4.5 | 6.888 | 1 | 20 |
| Osa01LNT0029600.1 | osa-miR1862g | Cleavage | 5.0 | 11.52 | 1 | 20 |
| Osa01LNT0029600.1 | osa-miR5073 | Translation | 4.5 | 5.755 | 1 | 23 |
| Osa01LNT0029600.1 | osa-miR5079a | Cleavage | 4.0 | 13.686 | 1 | 22 |
| Osa01LNT0029600.1 | osa-miR5148a | Translation | 3.0 | 17.349 | 1 | 24 |
| Osa01LNT0029600.1 | osa-miR5148b | Translation | 3.0 | 17.349 | 1 | 24 |
| Osa01LNT0029600.1 | osa-miR5148c | Translation | 3.0 | 17.349 | 1 | 24 |
| Osa01LNT0029600.1 | osa-miR5496 | Cleavage | 4.0 | 21.094 | 1 | 21 |
| Osa01LNT0029600.1 | osa-miR2275c | Cleavage | 5.0 | 14.627 | 1 | 23 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0029600.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0029600.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0029600.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0029600.1 | 1 | nan | Morphological trait | Seed | CDO118 | CDO455 |
| Osa01LNT0029600.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0029600.1 | 1 | yld1.1 | Physiological trait | Source activity | RM5 | RG462 |
| Osa01LNT0029600.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)