© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0325700.1
CCGCGCCGTTGTTATTCATATGATCCCCGCTAGCGGCGCTGCCGGTGATAGCCGTTCCTCCTGATGCAAGACCACTGTTAGCAGGAGCATGTTGAAGTTGTTGTTGCTGCTGCTGCTGCGCCAAGACACGGTTGTTAGTGTTCTTGGCCTCTTGCAGCAACTGATGGAGCACATGCTGCTGATATTGTGGGCTCACACCCAAGCCCTGGAGGCTGCTCTGCTGAGGCATAGGCTGCTGAAATGAGGCCGGATGTTGGAACTGCGCGAGATGCACCTGGTTTGGTCCACGGAAGGATCTAGATGCTTCCAGCTGAATGCCATTGTGCATTGCTGTGGGACCTTTAAACATGCTTGATGCCTCCTGCTGAAGCAAACTCTGGTTTGCGACTGAACTTCTAAGGATATTCTGGTAATTGTTAAGTGCAGCAGCATTCTGCAGACCATTTCCAATGGGATTCTGGTAATTGTTAAGTGCAGCAGCATTCTGCGGACCATTTCCAATTGGTCCAATACCGTGCGTCTCATTCGCATGGGTGTTCATTTCTGTTTTGACACCCATGGCTTTGAGGTTAGTCTGGTCATTAGGAAGGCCAGCAGCTGCCATTAGTTGCTTTGGCTCGCTTATGCTTATTACCATTTTCATGCAAAACATTGGTCAGGCAAAACTGCCTGGAGAACTTCATTATATAATATTGAGCGCCTAGTCAAACAATAGAGAACTGAGTGGTGAATTTGCATAAACCATACCTATAGGACCAAGCTTGTTCTTGTGGCTGAATTCAATCAGGTCTTTCATGTGATTCACCACCTCTGATATCTGCAAGCAGCGAACATATCTTTTAGATAGACCATGCTCATTTAAGGTGTGGTGGTCTATATTTTTCGCTAGCTGTCGTGACGCCGTCACAAACCTAAAGAGCGTAATGGGGTGCTGAGATCAATTAGATCATAAATAAAAAAAACTCTAGATGGAATTTTTAAAAAATCATGATTTGTCATGCCAGAAGAGGAATTAAAATTGCATGTCAAGGAACTAGTGGCATAGTTGGCTCACTAACATGTTGCAAATGTTCTGTGCATCACTGTTTGAGACCCCAGCTGGACCACTTTCAGTGGCAACAGTTTGATATTTCTGGGCAACTTGCAGCAGATGAGCAACCTGGGGTGAAAGAAACCTGCGAGTGATATACTCATCATGTCGCCGTGAACAGAACTCCCAGGACATTATCTTCAGTTCTGGTGTGAATATGATTCTCAACTGCCCCTCGTGTATCACATGCATATGTTCATAAATGCTTTTCTGAACAACTTTAGTATGTTCCAGCAGCATTAGTCCATTGGGCAACCGGAATTCATTGGCCATGTCAAGGAATAAGTATTCATCTATAACACCATGGTCAAATCTAATTTGACAGAGTCTAGGAAGTATTTCATAGGTAGCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0325700.1 | 6 | 1389896 | A | G |
| Osa06LNT0325700.1 | 6 | 1389998 | A | T |
| Osa06LNT0325700.1 | 6 | 1390331 | G | A |
| Osa06LNT0325700.1 | 6 | 1390485 | A | C |
| Osa06LNT0325700.1 | 6 | 1390643 | A | G |
| Osa06LNT0325700.1 | 6 | 1390721 | C | T |
| Osa06LNT0325700.1 | 6 | 1390817 | T | G |
| Osa06LNT0325700.1 | 6 | 1390860 | T | A |
| Osa06LNT0325700.1 | 6 | 1391010 | A | G |
| Osa06LNT0325700.1 | 6 | 1391426 | T | C |
| Osa06LNT0325700.1 | 6 | 1391545 | T | A |
| Osa06LNT0325700.1 | 6 | 1392014 | G | A |
| Osa06LNT0325700.1 | 6 | 1392041 | C | T |
| Osa06LNT0325700.1 | 6 | 1390338 | G | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0325700.1 | osa-miR399e | Translation | 4.5 | 12.678 | 1 | 21 |
| Osa06LNT0325700.1 | osa-miR399f | Translation | 4.5 | 12.678 | 1 | 21 |
| Osa06LNT0325700.1 | osa-miR399g | Translation | 4.5 | 12.678 | 1 | 21 |
| Osa06LNT0325700.1 | osa-miR171h | Translation | 5.0 | 18.938 | 1 | 21 |
| Osa06LNT0325700.1 | osa-miR417 | Cleavage | 3.5 | 14.766 | 1 | 21 |
| Osa06LNT0325700.1 | osa-miR810b.2 | Cleavage | 4.5 | 23.835 | 1 | 21 |
| Osa06LNT0325700.1 | osa-miR2876-5p | Cleavage | 4.5 | 20.554 | 1 | 21 |
| Osa06LNT0325700.1 | osa-miR2092-3p | Cleavage | 3.5 | 20.0 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0325700.1 | 6 | qCRE-6 | Physiological trait | Eating quality | RM170 | RM190 |
| Osa06LNT0325700.1 | 6 | qVE-6 | Physiological trait | Eating quality | RM170 | RM190 |
| Osa06LNT0325700.1 | 6 | qWA-6 | Physiological trait | Eating quality | RM170 | RM190 |
| Osa06LNT0325700.1 | 6 | nan | Resistance or Tolerance | Drought tolerance | RM170 | RM204 |
| Osa06LNT0325700.1 | 6 | qHD6 | Physiological trait | Flowering | RM8120 | RM1369 |
| Osa06LNT0325700.1 | 6 | Hd3b | Physiological trait | Flowering | nan | nan |
| Osa06LNT0325700.1 | 6 | qAC-6 | Physiological trait | Eating quality | R2869 | R1962 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)