© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0325800.1
CTATGCTTTGTACTTCAATGTACAGCCATACATTCTGAATTAGTTCATCAGAAGACATGAAGCATTTTATTAGTAGTAGCAATTTTCTGTTTCTTAATTGAATTAGCTTCTGAAAACCAAGAAATAATGGCTACAGTAACACACGCCTTTTCTTTTCAGTAAAATCACTGAAAAGGGTTACGCTACTACTACAGAAGAAAACAGCTGAATTGGTAGCATAACTATTGGCTATGGCTAACGGCTGTAATTTAGAGAGCATGAAAGGGAAATGCGCACCCGATGAGATCCTTCATTCCTTGCTTTCTTTAGTTCTCTTCTTTTGACGACAGCTCCAGAAGATGTTCTGCCTCCCTCAAGAACAACTTTGTCAGCTGCTTTTGGCCTCTGCGGTACACTATGCACGTCCTAATATTTACTTTTGACTTGGTCTCGTTGCTCTCGTCACTTCTCGTTGCGTCTTCTGAATCACTGAGATCGAATTTCTCAAGTAGTTGGCTGTCAGATGCTTCAGTTCCAGTGCCCTCTTCAAGTTCAGTCATTTTGACTCTAAGAAGATCCACAAGCAAACTCAGTGCTCCATTATCACCACTGACCTCCCATATAGCACTCCGGAGCTCATCATCTCTATCTTCATTAGATCCAATCTCTCCAAGCAATGAAGCGGTATGCTCAAGCTCATGTTCTTGCAGAGCAATTGTACGCAGGGTACTTATAAATTCCTGAGAGAAAACAATTTTCTCGATATATGATGGAACCTTGCGTTGACCACTCCAGCTATAACTAGAAAAAGGACTTGTATTATTTTTGTTCTCCTTGTTTTCACCAGAACAGCTACCAAAAAATCCATTTTCAAGCAAACTACGAGGTAAAAGACATCGCAATTCGGCATTCTGTATCTCCAGTAGCTTCATCTTAATATCAGCAGATTGAACCTGTCGAAGAGCTTCTACTGGATAATGAATCATGAGATAATCGTCAGGATTGTTGTCAATTACAAATCCATAGAGGTATAGTAGTTCCTCATTTCCTTTGTTGCCATAATTTATGCAGATCTCTGTTTCAGCCTTCACAAAGCTTTTATCAGCTAGTACAAGGTACATTGAAGAAGGACATCCAGTAACATGTCCCATGGAATCAACTTCCCATGTTGCCAGCGCCTTTACATTATGATTACAAAAGTCGATTCCAGGGACAAGGCCCTCAACCCAAATTGACTCTGTATTACTTGATTTAGGATTATCATTGCCACTGATATTCTTAGCTGTAATGGCAGTCCCAGTTCCCTGAGGGGCACTGAGACTAGAATCACCACAATCATCACCAATGTTGGCCCGCTTTTCGTCTAGTGATTCCGGAAAAACATAAAAACGAGGCAATGGTATATTCAATGCTCGAGTCCAGAATATTGAGTTTGCCCTGCCATAGAGTCGTGCTGCTGAGTTACATAAAACAAAGAAAGCAGGGAACTGAACCAGCAACTATGTGAAGGACCCTGCATCATATGTGTATATTGCATTTTTCATTTGTTGACATAAAACTGTTGTTCCAAGATATTTATTGAAGGAGCTGCAAATCAAAGCCATCACCCAATTAAGTACAATTTTCTTATGAATGAGCTAATTTCCACCTTGATGGCTTGAAAATTGTAATAGTAGCAAAGGTTAGTTGATGCTAGGTACAAAAACATCCCCACCATTTTGTAAACTAATGCCTAATTTGTCCAAAAAAAAATTAGCACACTGAATCTTTTGCACACGAAATTAACATGATATGCCATGTCAATACTATGAAACTACAGTATCAGTAAGGCTTATATTATTCCCCCCAAAAAAATGTAAGCCTTATAATATGACATTATCACTGCAAATGCAAAGCATAATTATACATACCAAAGGAAGTCTTCGAACCGCACTTCAATTGAGCTTCCTGATTCATCGACGTTTAAGAGCTCCCCAACCAGACCTTTAACCTTATTATCGAATAAGGTTTGCAATGACTTCCTCTGCATCACGGTTGCCCGGTGAAGTGTGGTCCCTTCCAACTCAGCAAGCTCATCTTCGGTGAACCAAATGGAGCTTCCGAAGGTGCTTGGAAGCATATCCAAATACGGCTTCCAGAGGGAGCTAGGGCGGAGTCGCTCGACCATGAGGAAGAGCATGACGAGGAGGCGGTCGTCGACGCCACCTTCCTCGAAGAGCGCGCGGCACCGCGGCCCGACGAGCGGGTCCTGCAGCACCCGCATCGGAGTGATGGCGAGATCGAGCGGCACCACCATCACCACCTCGTCGGTGGCGCCGGCCTCGGCGGCGGTGGAGAAGACGCCGTAGCCCTCGCGGCCGCAGCGGCGGATCGTGCAGCCGCGGAGGTCGGCGCCGTTGGCCTGGAGCCATTGGAGGAAGGAGTCTAGCTTGGCGTCGCCGGGTACTGCTGCTGCGGCGGCGGCGGCAGCCATGGTGTTCGACGGGCGGCGCCGGCGCGGGCGAAGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0325800.1 | 6 | 1438634 | C | T |
| Osa06LNT0325800.1 | 6 | 1438910 | A | T |
| Osa06LNT0325800.1 | 6 | 1439126 | C | T |
| Osa06LNT0325800.1 | 6 | 1439536 | C | T |
| Osa06LNT0325800.1 | 6 | 1439942 | A | T |
| Osa06LNT0325800.1 | 6 | 1440054 | T | C |
| Osa06LNT0325800.1 | 6 | 1440226 | T | C |
| Osa06LNT0325800.1 | 6 | 1440289 | T | C |
| Osa06LNT0325800.1 | 6 | 1440717 | T | G |
| Osa06LNT0325800.1 | 6 | 1440777 | T | C |
| Osa06LNT0325800.1 | 6 | 1441210 | A | T |
| Osa06LNT0325800.1 | 6 | 1441211 | A | T |
| Osa06LNT0325800.1 | 6 | 1440533 | G | A |
| Osa06LNT0325800.1 | 6 | 1441230 | T | G |
| Osa06LNT0325800.1 | 6 | 1441234 | A | G |
| Osa06LNT0325800.1 | 6 | 1441436 | T | C |
| Osa06LNT0325800.1 | 6 | 1442310 | T | C |
| Osa06LNT0325800.1 | 6 | 1442442 | A | G |
| Osa06LNT0325800.1 | 6 | 1442614 | A | G |
| Osa06LNT0325800.1 | 6 | 1442953 | A | G |
| Osa06LNT0325800.1 | 6 | 1443027 | C | A |
| Osa06LNT0325800.1 | 6 | 1443406 | A | C |
| Osa06LNT0325800.1 | 6 | 1443664 | A | G |
| Osa06LNT0325800.1 | 6 | 1443941 | T | A |
| Osa06LNT0325800.1 | 6 | 1444070 | T | C |
| Osa06LNT0325800.1 | 6 | 1444097 | T | A |
| Osa06LNT0325800.1 | 6 | 1444294 | T | C |
| Osa06LNT0325800.1 | 6 | 1444709 | A | C |
| Osa06LNT0325800.1 | 6 | 1444720 | A | G |
| Osa06LNT0325800.1 | 6 | 1444813 | G | A |
| Osa06LNT0325800.1 | 6 | 1444920 | T | G |
| Osa06LNT0325800.1 | 6 | 1445125 | G | A |
| Osa06LNT0325800.1 | 6 | 1445164 | G | T |
| Osa06LNT0325800.1 | 6 | 1440155 | A | G |
| Osa06LNT0325800.1 | 6 | 1440462 | G | A |
| Osa06LNT0325800.1 | 6 | 1443643 | C | T |
| Osa06LNT0325800.1 | 6 | 1443146 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0325800.1 | osa-miR5807 | Cleavage | 5.0 | 13.327 | 1 | 24 |
| Osa06LNT0325800.1 | osa-miR5516b | Translation | 5.0 | 11.903 | 1 | 21 |
| Osa06LNT0325800.1 | osa-miR169i-5p.2 | Cleavage | 5.0 | 16.749 | 1 | 22 |
| Osa06LNT0325800.1 | osa-miR1861g | Translation | 5.0 | 12.227 | 1 | 22 |
| Osa06LNT0325800.1 | osa-miR1870-3p | Translation | 5.0 | 11.553 | 1 | 24 |
| Osa06LNT0325800.1 | osa-miR1320-5p | Cleavage | 5.0 | 14.497 | 1 | 21 |
| Osa06LNT0325800.1 | osa-miR2873b | Translation | 5.0 | 19.048 | 1 | 21 |
| Osa06LNT0325800.1 | osa-miR5492 | Cleavage | 4.5 | 11.605 | 1 | 21 |
| Osa06LNT0325800.1 | osa-miR5515 | Cleavage | 4.5 | 22.074 | 1 | 21 |
| Osa06LNT0325800.1 | osa-miR5516a | Translation | 5.0 | 11.903 | 1 | 21 |
| Osa06LNT0325800.1 | osa-miR5338 | Translation | 4.5 | 24.418 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0325800.1 | 6 | qHD6 | Physiological trait | Flowering | RM8120 | RM1369 |
| Osa06LNT0325800.1 | 6 | Hd3b | Physiological trait | Flowering | nan | nan |
| Osa06LNT0325800.1 | 6 | qAC-6 | Physiological trait | Eating quality | R2869 | R1962 |
| Osa06LNT0325800.1 | 6 | qCRE-6 | Physiological trait | Eating quality | RM170 | RM190 |
| Osa06LNT0325800.1 | 6 | qVE-6 | Physiological trait | Eating quality | RM170 | RM190 |
| Osa06LNT0325800.1 | 6 | qWA-6 | Physiological trait | Eating quality | RM170 | RM190 |
| Osa06LNT0325800.1 | 6 | nan | Resistance or Tolerance | Drought tolerance | RM170 | RM204 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)