© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0325900.1
GAAGCAAGCAAGCAACTTTGCTGGATGATGATTGGCAACAAGTTACAGATCTGGAGTACACACCGGCGTCATGGTTAGTTTCTCTGTACAAATCGATCTCCGCCATGGCCGCGAGCAGGTACGGAATTATGTTCAGCTGCACGGCAGCGGAGACGGGAGGTTGCCGGGGATGGCCGGGACGGTGCCTTGGTCGGTGCCTTCAAGTCAAAATAATGTATCGCTCCATCTTTGTCAAAACTCAAATGAAGTCGAGATCCTACTGTCCAAAACAGACGCTTAGCCTTTGTTCAGGTGGAGAAAAGGAATCTGAACCAGGAATTGTCAAAGAGAAGAATTCCTATGTTTTGTATGTCTTGACTGACTGGATCATAGCTAGCTTTGCATGTTACCAATCATGTTCTCTTTGCAGTCCTTGGTGGTAATATAATTTGGAAGATCAGCAGTCCGGTGATCTAAAGCACGGCGTGCTTCAGTAGTTAAAGTGAGCTTGTTGAAGAGTTCAGATAATGGAGCCTGCTTACCCTTCCTACCAGTTGACAACTTAAATTCCTTAGGAACTGTTGTGCTCCTTTTGGCATTTTGAAATACACCAATATCTCCTTTGCTTCCTAGTATCTTTTTATCCACTGGTCGAGCTTTAAATTTAAACAGGTCATCTCTGCACTCATCCGGCGTTTTGCAAATGTTGTCAAGATGCCTTGGACGATTAGCAGTACACACTGGCACATTTGACCCAATACCGCGATGTGGAACACTTGCATGCTGATGATCATTGCGCCCAGAAGGTTGCACAACCTTTCTAATCGATGACGCTTGTGTCATAGAAATGGATTGTGCCGCCTGTTTGTTTAGCTGCTTTGAATTAGTTGGCACTGCTCTGAGTATCCTTGACCTCTCTGCTCTTAGCTTTGTTGCCAATTCAGGTTCTCTGGGAATTGTAATCTTCAATTTTGGTACAGCAATGGCATGATCAGAGCTACTAGTCATAACATTCTTTGCATGATTCTTATGGATCAACTCAGGTTGATTAGTTGAAACAACCTTGTTGAGATGCCCTCTTTCTAGTCTCTGCCTTTTAGCAGCTTGGTAGGTGCAGTCATTGGAGCTCATGGTACTTCTATCACTTCTCACCCCAACCGACTTTTTACTCTGTGTGGAGTTCTTCACTTCAATTTGTCTGTTTTGCCTGGCTAATTGACTGGCTGTAGGCTTCATCAGTGTAGACCTCTTTGGGATAGTTCCTTTTCCAATAGTTCGAACGCCATGTTTTCGCTCGTTCGCTGAAACTTGATGGCAAGGTATCCTTCCTTCATTTGGTATATGTGGCCGATGGATCGTTTGTTCAGCACCATTGGAACATTCATGAGAGGATTTAGAGCAATGTGCTGCATCTATATCCACAGTGCTTCTTAAACTTTGCAACCCAAGATCTTCAGCCAACATCTTGGCAATTAAGGGAGAGGGCGGGTAGCTGGGCGCGGAGGCGAACCACAGCTGCGCCGCCGCCGCCTCCACCGGCGACTCCTCCACGGCGAGGTCGAACCACCTGGGCGCGTCGAACTCGTACTCCAGGTCCACCTCGAACCACCTCACCTCCATCACCATCACCCCCTCCCCCATCCCCTCCTCGAACCCCGCGCCCTCCCCTCCGCCGCAGGAGGAGGACGACGTGGACGAGACGTCGCGCATATCCTCGTCGTCGCCGTCCATGGCTAGGGCTCGCAGGGTGGGGTCAGGGCCGCCGCGGTGGTGGTGGTCGGCGGCGAGGTATTTAACGGTGGCCGGAGACGAGGAGGAGGAGGCGGAGGAGGAAATTTGAAATGCGGGGTCGGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0325900.1 | 6 | 1614499 | A | G |
| Osa06LNT0325900.1 | 6 | 1614728 | G | C |
| Osa06LNT0325900.1 | 6 | 1614841 | G | A |
| Osa06LNT0325900.1 | 6 | 1615187 | A | G |
| Osa06LNT0325900.1 | 6 | 1615343 | A | G |
| Osa06LNT0325900.1 | 6 | 1615615 | C | G |
| Osa06LNT0325900.1 | 6 | 1616149 | C | T |
| Osa06LNT0325900.1 | 6 | 1616444 | G | A |
| Osa06LNT0325900.1 | 6 | 1617816 | G | A |
| Osa06LNT0325900.1 | 6 | 1618017 | A | C |
| Osa06LNT0325900.1 | 6 | 1618167 | C | T |
| Osa06LNT0325900.1 | 6 | 1618243 | T | C |
| Osa06LNT0325900.1 | 6 | 1618752 | T | G |
| Osa06LNT0325900.1 | 6 | 1618777 | C | T |
| Osa06LNT0325900.1 | 6 | 1618901 | C | T |
| Osa06LNT0325900.1 | 6 | 1619290 | A | T |
| Osa06LNT0325900.1 | 6 | 1614431 | G | A |
| Osa06LNT0325900.1 | 6 | 1613957 | T | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0325900.1 | osa-miR5835 | Cleavage | 4.5 | 18.899 | 1 | 24 |
| Osa06LNT0325900.1 | osa-miR393a | Translation | 5.0 | 19.175 | 1 | 21 |
| Osa06LNT0325900.1 | osa-miR171c-5p | Cleavage | 3.0 | 11.161 | 1 | 21 |
| Osa06LNT0325900.1 | osa-miR171c-5p | Cleavage | 5.0 | 16.459 | 1 | 21 |
| Osa06LNT0325900.1 | osa-miR393b-5p | Translation | 5.0 | 19.175 | 1 | 22 |
| Osa06LNT0325900.1 | osa-miR171i-5p | Translation | 4.0 | 11.161 | 1 | 21 |
| Osa06LNT0325900.1 | osa-miR396e-5p | Cleavage | 4.5 | 18.668 | 1 | 21 |
| Osa06LNT0325900.1 | osa-miR2121a | Cleavage | 4.5 | 14.231 | 1 | 24 |
| Osa06LNT0325900.1 | osa-miR2121b | Cleavage | 4.5 | 14.231 | 1 | 24 |
| Osa06LNT0325900.1 | osa-miR396g | Cleavage | 4.5 | 18.668 | 1 | 21 |
| Osa06LNT0325900.1 | osa-miR396h | Cleavage | 4.5 | 18.668 | 1 | 21 |
| Osa06LNT0325900.1 | osa-miR396d | Cleavage | 4.5 | 18.668 | 1 | 21 |
| Osa06LNT0325900.1 | osa-miR5144-5p | Translation | 5.0 | 19.929 | 1 | 21 |
| Osa06LNT0325900.1 | osa-miR5146 | Translation | 4.5 | 17.564 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0325900.1 | 6 | Hd3b | Physiological trait | Flowering | nan | nan |
| Osa06LNT0325900.1 | 6 | qAC-6 | Physiological trait | Eating quality | R2869 | R1962 |
| Osa06LNT0325900.1 | 6 | qCRE-6 | Physiological trait | Eating quality | RM170 | RM190 |
| Osa06LNT0325900.1 | 6 | qVE-6 | Physiological trait | Eating quality | RM170 | RM190 |
| Osa06LNT0325900.1 | 6 | qWA-6 | Physiological trait | Eating quality | RM170 | RM190 |
| Osa06LNT0325900.1 | 6 | nan | Resistance or Tolerance | Drought tolerance | RM170 | RM204 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)