© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0326200.1
GGCTCAAATGATTGTGAATTATTAAATTTCATAGCTCGGTTAAAAAAAAAACTATACAAACTCGACAGATACGATACACATTGAACTTACATCTATAACTAGCCTATAAAGTCGCACATTCGCACCTCTATAACCATTTTCCACATCGCCATAAATAACTCGATTTCACGACGAATTATCGGAATCGATTGATCCATGAGTGTAATCGTCACCATGTCATTGTTGTAGTGTTCATAAATATACAAATTTGGGCAAAACAACTGTCGCAACTGTTCTACGTTTTACATCTGAAAGAAGAATAAATAATGTGGGCAAAATATGTTGTCTACATACATGTTTTAAGTACATTTGACACTTCTTCTCACTTGGTATATATACTAGACTATGAAAAAATCGTGTAATTATTGTGAGTAGTCCAGTCATTGATGACATCCAACGTTTCTAACTGTTCGTAGCAATGGGTTTCAAAAGGTGACAAGTTTGTTTCATCGGTTGATTTGCAAACTAAGTGCGAAGTTTAGACGTCATTGGCACCACCTGCAGTTAGCATCTTCAGCTTCGAAATAAATTGTGGAGGGTCATCTATGCTAGAAGATCCCAGGACAATTTCGCGCTTCAGTTTCATAGTAAGCTTGTGCACCGTCCGCAGTTCCGATCTAGTGGCTCCACCAATCATGAAGACAAAAATTCGGTTGCCTAGCCTCTTGAAGTCATTAGATCCATGTCTCAAGACCGAGGAGTCACTTGATTGACTATCATCAGAGTTTCGAGACTTAGCCCAGGTTGGTGTCCGCCGCGATCTCCTGGACATGGGTTGTGCTTGTGCTGGTTTAGTCGCGGCTGCACTTTGTGTAGATCCTTGTTCAGTGGAACTGGGTTCACTCATGGATGGGTATTCATTCAAAGGTAATGCACCTTTGCTCAGTTTCTCAATCAACTCCTCTATAAGTGGGAAAAAACGTGATAATGCCCAGGTTTCATCGCCATCCTGCCGTTCTGTCCTCGCAGCATTTTTTTTCTTTTGTGCATCAAATTTGAGAGAGAAGCCGCCAGGCCGTGATGCCTTTTTTGTATCTGAACCAACCAAGTATCTTAAACTATTTATGGCATCCATCTCATCATGTGGCAGTTTTGCTAGCTGCATCAACTTTTCCCCTTTGTCACCTTCAAACTTCTCTGGATATACAATTGCATATATAATAAGCAACCTCAATTTGTTTTCTGGGCTCATATCCTGCTTTGACCTGAGGATACTGATCACCTCCTTGGCTGCTGCATCTCCAAAAACTAGATCCTGCTCCACCTGCCCAATGTCACGGAGACCATACTCTCTGATAAACTTGTTGATTTTTCCAGCAATCTCTATATGGAGGGTCAATTTCTCAACTTGTTCACCGTATTGTGGCAAAGCTTGAACGATCTTCTGCAGATCCTTTGTAGAAATTTCACCACCATCTCTTGAATGAAGTTGAGCTGCTTTATTCTTTGAAACAAAGTTATTCATCTTATCATACAACCTCTCACTAGCATCAGCTATGTGAATGTGGCGAAGCTCAACCCAGAGAGGATCATGATCCTCCAATAAAGCCTCCTTTCTCTCAGGTTCTGATCCCGCTTTCGACACCTCATATATGTATTTTTGGCCATCCATTTCAAGTAGATCATGGCACATTGCATCATAGGTCCATTCATGAATAACAGGTGCTATCTGATCTATAGGCCTGTCGACAATGAGCAGTTCACATGTCTCCTTCTGGGGAAATTCAGGTATTGTTGATTTATATTTTGACACAATATCCCAAACAGCAGTCGCTAACCATTTTGGAACCATGTCAAATTTTGGTGTTGTCATTGGATCTGTGCCCTTTGGGGCACGATACCGCACACAAGGAAATTCCTTCAACGAAGCAAATGTGGTAGCAATGCGAGTAGCCATAGTGCTTATAGTGTCATTGAACTTTTTCGAGTTGTGCTGAGCACTATATAAATCAGTGAATGCCATGTCATGGTCAGTTGTGAATCCCTGCATGTCAATTGCAAAGAACTCCAAATTCATCTCTCTTAGTGCACCAATACGTGGTATCACACTGCTGTCGTTCTTTATGTAAGAGACCAGCTCCTTAGGAATCGGTGAACTAAAGAATATGTATGCCTTCCTGTACAGTGGACATCTCCCAGACATGTCAGATAGAAGCATTATGACATTTTCTTTCAGTGGCTGGAGGAAGTAGATTGCATCCATGGAAGGCATGGGCTCCCTTCGCTTGAAAAGATCTTCAACCAACGAGATTCCTGCATCGGTAATTTCTGCCATCTTGCAGGCATAAGCCATGATCCTCACCGTAAATTTGTCCATGATAAGAACCTTCCATGAGCTTTTGGTCTCCTTATCTTTGTCCGGCTGCAGCAAGTCCTTGAGTATACGATCCCGGCAGATGTTGCGGAAGATCTTGGGGTCGTCGCACGGGGCGCCGAAGTCCGACCCCGACATCGACATCCCGCCGCCGACCGGAGTTGATCCCCTCTACCTCCACTCCTCTCCTCCCTCTCCCTCTCCCTCAAAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0326200.1 | 6 | 1900914 | C | T |
| Osa06LNT0326200.1 | 6 | 1902918 | C | T |
| Osa06LNT0326200.1 | 6 | 1903456 | A | G |
| Osa06LNT0326200.1 | 6 | 1903702 | A | G |
| Osa06LNT0326200.1 | 6 | 1905386 | T | C |
| Osa06LNT0326200.1 | 6 | 1905471 | A | G |
| Osa06LNT0326200.1 | 6 | 1906974 | A | T |
| Osa06LNT0326200.1 | 6 | 1908203 | A | T |
| Osa06LNT0326200.1 | 6 | 1908783 | G | A |
| Transcript ID | Transposon ID | Chromosome | Strand | Start | End | Counts |
|---|---|---|---|---|---|---|
| Osa06LNT0326200.1 | DTM_#DNAt_MULE_japo_Os0243 | Chr6 | - | 1904372 | 1905147 | 775 |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0326200.1 | osa-miR5534b | Cleavage | 3.5 | 24.375 | 1 | 21 |
| Osa06LNT0326200.1 | osa-miR159a.1 | Cleavage | 4.5 | 15.128 | 1 | 21 |
| Osa06LNT0326200.1 | osa-miR159b | Cleavage | 4.5 | 15.128 | 1 | 21 |
| Osa06LNT0326200.1 | osa-miR810a | Translation | 4.5 | 24.99 | 1 | 21 |
| Osa06LNT0326200.1 | osa-miR812a | Translation | 5.0 | 13.748 | 1 | 22 |
| Osa06LNT0326200.1 | osa-miR812b | Translation | 5.0 | 13.748 | 1 | 22 |
| Osa06LNT0326200.1 | osa-miR812c | Translation | 5.0 | 13.748 | 1 | 22 |
| Osa06LNT0326200.1 | osa-miR812d | Translation | 5.0 | 13.748 | 1 | 22 |
| Osa06LNT0326200.1 | osa-miR812e | Translation | 5.0 | 13.748 | 1 | 22 |
| Osa06LNT0326200.1 | osa-miR1429-3p | Cleavage | 4.5 | 12.229 | 1 | 21 |
| Osa06LNT0326200.1 | osa-miR1852 | Cleavage | 5.0 | 13.86 | 1 | 21 |
| Osa06LNT0326200.1 | osa-miR1854-5p | Cleavage | 4.0 | 15.283 | 1 | 21 |
| Osa06LNT0326200.1 | osa-miR1861b | Cleavage | 5.0 | 18.079 | 1 | 22 |
| Osa06LNT0326200.1 | osa-miR1861d | Cleavage | 4.0 | 18.079 | 1 | 22 |
| Osa06LNT0326200.1 | osa-miR1861f | Cleavage | 5.0 | 18.079 | 1 | 22 |
| Osa06LNT0326200.1 | osa-miR1861h | Cleavage | 3.5 | 18.079 | 1 | 22 |
| Osa06LNT0326200.1 | osa-miR1861i | Cleavage | 5.0 | 18.079 | 1 | 22 |
| Osa06LNT0326200.1 | osa-miR1861j | Cleavage | 3.5 | 18.079 | 1 | 22 |
| Osa06LNT0326200.1 | osa-miR1861l | Cleavage | 5.0 | 18.079 | 1 | 22 |
| Osa06LNT0326200.1 | osa-miR1862e | Translation | 4.0 | 15.179 | 1 | 24 |
| Osa06LNT0326200.1 | osa-miR827 | Translation | 4.5 | 16.101 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0326200.1 | 6 | Hd3b | Physiological trait | Flowering | nan | nan |
| Osa06LNT0326200.1 | 6 | qAC-6 | Physiological trait | Eating quality | R2869 | R1962 |
| Osa06LNT0326200.1 | 6 | alk6-1 | Physiological trait | Eating quality | RM190 | RM253 |
| Osa06LNT0326200.1 | 6 | hr6 | Physiological trait | Eating quality | RM190 | RM253 |
| Osa06LNT0326200.1 | 6 | ac6 | Physiological trait | Eating quality | RM190 | RM587 |
| Osa06LNT0326200.1 | 6 | qAC-6 | Physiological trait | Eating quality | RM190 | RM510 |
| Osa06LNT0326200.1 | 6 | qGC-6 | Physiological trait | Eating quality | RM190 | RM510 |
| Osa06LNT0326200.1 | 6 | nan | Resistance or Tolerance | Drought tolerance | RM170 | RM204 |
| Osa06LNT0326200.1 | 6 | nan | Morphological trait | Shoot/Seedling | OSR19 | RM225 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)