© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0326400.1
AATCAGAGTAGCAACTAATATCACGCCTTTTTCAGTAATAAGTTACAGACTTACAGTAAAGATCAGCTACTGTATAATGAATACAAGTATTATGATTCATGGCCAAATCTACACCTATCTGCTGTCTCTCGGTCTCTAAGTGATAACAGCTCTCATTTTTGGCCTTGCTGATATTTTTACAACAATTTTACAAACAACGTAAAATACGAACCCCTACCATAATGAATAAATCAATTGCAACCCAGACTTTCAACTTCTCAGCAGCCAGCACAACGAAAATATAAAACTCTTGAGGAGAACAGGGGACCTGTCGAGATGAAAACTCAGGTTCCCATACGCTTGCAAAAATTGGGTAAATCATGACCTATATGCCTGATTGCCAGCTCTTGGCGCAATGGCACCTTGATTGTGAGGGCGGAATGTAAAACCAAGCAGTGAACCAGCAGCAAATAGTCGGTTATCAGCATTCTATGCGCAATCTTCTCATCTCTGATTGAAGAGTGGGGCTGGAAGTCAATGTCCGGTACGCTAGCATCCTTATGTCCTCACGAGAACAATCCCTTGAAATCCGAACAAGTTCCCATAAAGCACCTTCACTAATGATATCCTTTGAATTTACTTCATGTTGCGCCAAATGGCACAGTGCAAGCTCAATGTGCCTCCTAATTGGAGCAGCTTCATTATTTGCATTTTTTACAATCCAGGGAAGCGCACCATCATCAATTAATAACGATTTTCCCACCTTATTTCCTTGCGTAGCTGCTCTAGATTCACATTTAGCAAAGTTTGCGATGCCACGTGCAACTTGAGCAAGGACATCAGGGTGCCCGCATTTGACCATTCCCAGCAATGCTTTGATGCCACCTTCTCCTCTCAACCGTGTTTGCAGTTTGTCATTGCCACAAAGGTTGGCGATGGCTCCAGCAACCATTCTTAGAGTTTGTGGGTCCTCCGCATCAGATGCTGTCATAGATAACAGGCTTACACCACCTTGGGCCATGATAAGATCTTGGTTTGTTTCATTCATTGCAAGGTTAGCAATTGCTCCTGCTGCTACTCTGCGAATGGTCTCATCCTCGGAGCTCCTAAGCAGCATTAGGAGAGAAGTAAGGCCACCTGCTTCTACAATCTTTTCCTGATTTGCCTCTTCAGCTGCCAGATTCGCGACAACTTTCACTGCATGAACACGAACATCAGGTTCTTCCGATTCAAGCAACGACAGTATCTTCTGTAACCCAACTTGTTCAAACAGTTTAGCAATGGGCGGCTTAGGTCCATTGCTCTGCTCTCTAGGCTGAGAATTCCTTGAATGAGACATCAAAGAATCAAACCCAGGAAATATTTTCCCAGATCCATCTCCTCTGTCGAGGCTCCTCCTTGTCTCATCAGCATCAAGACTTAGCTGCAATAACTGGCTTTTCAGAACAGCAATTTCTTCATCAAGTTTTTCTTTTTGGCTAGCTTCAGTATCCAGCATTTTCCGTAGTTTGACAACCTCAGCAGTAGCTGCAGCCTCCATCTTTTTCCAGTGTAATACTTGATTCTTAAGGTCATTAGCCTCATCTTCAGCAGATTGGCGCAACACTTTCTCATTCTGCAGTAAGTTCTGCACTTCTCCTACCTCACTGGATGTAGGTTCAGTTTCTTTAATCAGTTTCTTAGGTGATTGTTGGTGTATTTTCCATTTCTCCTCCAGTATCTTTATAGAGTCAAGGTATTCCTGATGGTACTTCGCTTTCTCATTCTCTAGAGAAATTTTGTATTCTCTTTCAGCCTCCGTAACACGCAATTGAGCTTCTGCTGTTATTCTTTCAATTTCATCATCAAAATATTTCCTCTGTCTTTCGTTTTCTGCAATTAACTTATCTAATTCAATATCAAGTCTTCTACATAAGCTTTTGTAGTCAAATTCTTCCTTCAGTTTCACCATGTTTTCAACTTTCATTGCTCTTTGCCCAAACATTATTGTACTGGTAGTCTCACCCCGATGTCTTGGAGATGGACCAATTGTCACAACCAATGATGTCCTTGCAGTGCCTCCAAATGAATCTTTAAGCAATCTTGTAAGCTTTGAATCACGAACTGGTACATGTGGGCTGTTTTCAGCTAGCGCGTTGATGCATTTTCCAAGTGCACTTAGGGACAAGTTGATAGACTTTGCCTCTTCTAATGTATGACCCTCACTTCCTGACTTGTCTATTCGCTCAGATCCCGCCAAGTCTACAACCACAAGCTTGCTTTTCCTAACAATAGGTGGTCGGAGTGAACCCACCATGGAAGATGAA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0326400.1 | 6 | 1974504 | T | A |
| Osa06LNT0326400.1 | 6 | 1975116 | G | C |
| Osa06LNT0326400.1 | 6 | 1975157 | G | T |
| Osa06LNT0326400.1 | 6 | 1976671 | A | G |
| Osa06LNT0326400.1 | 6 | 1978179 | T | A |
| Osa06LNT0326400.1 | 6 | 1978182 | A | G |
| Osa06LNT0326400.1 | 6 | 1978878 | A | G |
| Osa06LNT0326400.1 | 6 | 1979660 | T | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0326400.1 | osa-miR5541 | Cleavage | 4.5 | 13.98 | 1 | 21 |
| Osa06LNT0326400.1 | osa-miR5791 | Cleavage | 3.5 | 4.294 | 1 | 21 |
| Osa06LNT0326400.1 | osa-miR171h | Cleavage | 5.0 | 13.258 | 1 | 21 |
| Osa06LNT0326400.1 | osa-miR418 | Cleavage | 5.0 | 4.971 | 1 | 21 |
| Osa06LNT0326400.1 | osa-miR1850.1 | Cleavage | 4.5 | 12.909 | 1 | 21 |
| Osa06LNT0326400.1 | osa-miR1857-5p | Cleavage | 4.5 | 14.118 | 1 | 21 |
| Osa06LNT0326400.1 | osa-miR1872 | Cleavage | 4.0 | 10.923 | 1 | 24 |
| Osa06LNT0326400.1 | osa-miR2093-5p | Cleavage | 4.5 | 14.854 | 1 | 20 |
| Osa06LNT0326400.1 | osa-miR2095-5p | Cleavage | 5.0 | 16.261 | 1 | 22 |
| Osa06LNT0326400.1 | osa-miR5519 | Translation | 4.5 | 17.611 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0326400.1 | 6 | Hd3b | Physiological trait | Flowering | nan | nan |
| Osa06LNT0326400.1 | 6 | qAC-6 | Physiological trait | Eating quality | R2869 | R1962 |
| Osa06LNT0326400.1 | 6 | alk6-1 | Physiological trait | Eating quality | RM190 | RM253 |
| Osa06LNT0326400.1 | 6 | hr6 | Physiological trait | Eating quality | RM190 | RM253 |
| Osa06LNT0326400.1 | 6 | ac6 | Physiological trait | Eating quality | RM190 | RM587 |
| Osa06LNT0326400.1 | 6 | qAC-6 | Physiological trait | Eating quality | RM190 | RM510 |
| Osa06LNT0326400.1 | 6 | qGC-6 | Physiological trait | Eating quality | RM190 | RM510 |
| Osa06LNT0326400.1 | 6 | nan | Resistance or Tolerance | Drought tolerance | RM170 | RM204 |
| Osa06LNT0326400.1 | 6 | nan | Morphological trait | Shoot/Seedling | OSR19 | RM225 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)