© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0327200.3
GTCAGAACACGGGAAAAGTATCATATAACGCGAACAGCATACCAGGTACAGAACTTGGCTATCCAAATTAATCTCTTTATCCTAGTACTAGCAATTTGCATAGCTGTTTGCCTGCTTAACAGATTGTATTGTGTTGCGCACATGCTACCTAAGATACATTGGCCCAATTGAGTTTCAACAAATGCATTCTGTTGCGCACATGCTACCTAAGATACAATGGCCCAATCGAATTTTAACAAATGAAAGCTCATTCCTTCTTCTGAGTGTCCCTGGGAATGCAGCACTGGGGATAGCAAATATCTCTGGCTGTTATATTGCTGTTAACAAGAACAAATAGGGGTGGATGTCTTTCATGTGCCCTTTGGCATTCACCTCCACCTTGCACCTCCCAATCTGATTACCTCTTCAGTTCCAGAATCCCTGCGAGCTTTATCATCACCTGTATCATCCTTTGTGTTTGTCGCGTCACCATATAAATCCTTCAATTTTGCCAAGTTGGATGGCTCTGGTGGTCTACCAAATGGGCTAGAGCGGTGATTTTCACCTTCGGTTCTGCCACGGTTTGGACTCCTGCTCCTGCTCCTGCGGGCACTCGAACGTCCATGTCGATCAGAATCCCTGTCCCTCCTTTCACGGCCTTGTCTGTCAACATTCCTACTTGAATAGCTTGAACGACGGTAATCACGGTCTCTGTCCTCACGGGCATGGCGATCATGCTCCCTATCCTTGTGCCTACCACGGTCACGATCCGAACGATCACGCTCAGAATCATGATCACGTTCATGGCTCCGACTTCGTCGCCTCCTGGGTGAAGATCTTGCACACTCACCATCAGAACTCCTTTCTCTATCCCTTGCTGAAGGCAATGTCTTCCGGACAGGGGATGAGTCCCTTGTGGATGCACGGTGTGGAGCACGCTGACCAAAGGAGACCGACAGAGAAGCCTTTACTGAAGGAGGCCGTCGGGCAGTATCATCTGAACCAAGGCGACTAGAGTCCCCTGTTATTCCTGACTGCTTTGTTGGGAGCTTCATCTTCTCAAGATGGCCAGTGACCTGTCTCAAGATCGGAAGAGGCACTCGTGGAAGAAGACTGTCAAAGTAGTACTGCAAAGGAAAAACAGGCATGGACACCAAGTTTTTAATATCATGTCTCAATGGTATTTCTCAACTAAATCTACCAGAACAATAGCTCAAAAAAGAAACACTGAACAATAACATCAAAATGATCAACCAAAATGGAATGAAGCAAATATAGTTGTGAGGTTAATATGCTGTCTTGGCATGAAGTAGATAGACGTGGTGTGGGGCTCTCAGTAACATGCGGCTCTAAGCCTCTAACATCAGATGTGAAGACAAACTGCGATAGTAGAAAATAAATTGGAATTTAAAAAACTGCATTAAAAAACTACTCAGTTGTTTTGTGATTGTCTCCGGCCAACTGTAAACACTGCTTCAACTCACCCATGAAACATTCATCACAATTTGCTATTTGTTCTCTGCTAACTTGCATGGAAAATGAAATCTACGAAATAACTACAATATCATAGAAGCCCTGACTGGCAATAATTATGAGGCCGACCAGTAAAAGGAAAAATCAAAAAAGCACTTTCGTAGTTCACTATTTACTAAAAGTTGGGGTATTGCTCACCCGTTTCTGTTCACTATGAACCTAAAAAAATTATAAGTAACTTTCAATTATTACATGATTATTACACACTGAACTTCGTTTTCATTTTTGAAAGGAAAGTTGATTTTCTAGATTAGCTATTCCAAAATATCAAGCATAGACAGAATATCTCTTGCCAAAGAAGAAACAAATATGAGACGTAGTCCTCAACAAATTTAAACAGAAAAAAACATCTCAAAACTAAAAAAGATAGCACCATAGCATACATCATTTTCTTTTGTTATAAATCCTTAACTAGATGAAACATAGGAAACTCTAGCAGAAAAATGGAAAATAAACATTTGAGTAACACATCATGACAAACCTTATACAAAGTGGTTACTGGTGGAAGAGATGATGTCTCCTCTTAAAGCAACTCCACAATTGAAATTTCCGCTCAGTATGCCAAACCAACAGGTGAGTGATTCAACAAACACTGCCCAAGTAGAAGATCTCGCACATAAACACCCATAGTAGTCATTTTACCATTAGATCCAGGAGAAAACTCCTGAGCAAGAAGAAAGGCACAGTTTTCATAGGTACGTTATGCAGGGATTGAACTTTAATAAAAACACAGAACATATATTTACAACTGACAAAGGCACACAAAAAAGTAACAATTTAACATATTAAAAATAGATCCAGATGGCTCAGCGCTCAGTTCACATTTCATGCACATAACATGTTTATGCTAAGAAGCAACCATTATTAGTAGTCTAGTGCAGGAATAGTGATGTATTTCACTTTTTCCTTTCTTTCTGGAGTTTACGCTTTCATGTTTTCAATATTTTTTTTCTGGTTTGTACAAGCATTGTCCTTGACAAACAGTAGGCATCTTATACAAATTTAGCATACCACGTACCATTTATAGGGAGCAGTACTAAAGTTTGCTGAATACTTCAAAGTACAAAATAGGATATACGAAGGAAAACTATAGATTTATCCTTTTACAGCTTCAACTAATCGTCAAAATGATGCAAAATACAAAGAAAGCTACCAAAAAAGATAATACCTCATCATCTTTAATGTAGGGTTCATACCAACTCCACAACGTCTTTGGTTCCGCAACATATCGCAGGTAAAGAAATCCAACAGCTCTGATGTAAGGCGAGTCAGGGTGCTTCAGCAGGCCGTGCATCTGCTTAACCGTGAGCTTCATGGTGAAGAACTTGTAGAGGAGGCAGAAGGCGCTGGAGGGCCCGCGGCAGTTGCCGGTCATCCATGGCTCTACGTGGTCAACCTGATTGTAGATCTCATCAATGACCTCGTGGTAAGTCTTCAGCCTGTAGAGCTCCTTGAAGTAGTCCGAGGAGAGGATGTTCACTGACAAAACCTTCTCCATGAGCACATCGATTGGCCTCCCTGATGACTGTATCTCCATTTCCCCTCCTCTCTTTTCTTCTCACCGGGATGCGAAGCGGCGGGCGGCGCACGGGGGAGGCCACGGCGAGCGGCGGCGCGGACGAGATTGGGGATTCGTTTTGGATTGGGGATTAGGGCGACGAGAAGAGGAGAGAGAGAGAGAGAGAGAGAGGTAACCGATGGAGGAGAGATGGAGTCGTGGCCGTGCGACCGTGGCAACGGGCGAGGTTACATCTTAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0327200.3 | 6 | 2285965 | C | T |
| Osa06LNT0327200.3 | 6 | 2286696 | T | C |
| Osa06LNT0327200.3 | 6 | 2287426 | T | A |
| Osa06LNT0327200.3 | 6 | 2288889 | T | C |
| Osa06LNT0327200.3 | 6 | 2289142 | G | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0327200.3 | osa-miR5079b | Cleavage | 5.0 | 11.433 | 1 | 22 |
| Osa06LNT0327200.3 | osa-miR156a | Cleavage | 5.0 | 10.136 | 1 | 20 |
| Osa06LNT0327200.3 | osa-miR156a | Translation | 4.0 | 13.714 | 1 | 20 |
| Osa06LNT0327200.3 | osa-miR156b-5p | Cleavage | 5.0 | 10.136 | 1 | 20 |
| Osa06LNT0327200.3 | osa-miR156b-5p | Translation | 4.0 | 13.714 | 1 | 20 |
| Osa06LNT0327200.3 | osa-miR156c-5p | Cleavage | 5.0 | 10.136 | 1 | 20 |
| Osa06LNT0327200.3 | osa-miR156c-5p | Translation | 4.0 | 13.714 | 1 | 20 |
| Osa06LNT0327200.3 | osa-miR156d | Cleavage | 5.0 | 10.136 | 1 | 20 |
| Osa06LNT0327200.3 | osa-miR156d | Translation | 4.0 | 13.714 | 1 | 20 |
| Osa06LNT0327200.3 | osa-miR156e | Cleavage | 5.0 | 10.136 | 1 | 20 |
| Osa06LNT0327200.3 | osa-miR156e | Translation | 4.0 | 13.714 | 1 | 20 |
| Osa06LNT0327200.3 | osa-miR156f-5p | Cleavage | 5.0 | 10.136 | 1 | 20 |
| Osa06LNT0327200.3 | osa-miR156f-5p | Translation | 4.0 | 13.714 | 1 | 20 |
| Osa06LNT0327200.3 | osa-miR156g-5p | Cleavage | 5.0 | 10.136 | 1 | 20 |
| Osa06LNT0327200.3 | osa-miR156g-5p | Translation | 4.0 | 13.714 | 1 | 20 |
| Osa06LNT0327200.3 | osa-miR156h-5p | Cleavage | 5.0 | 10.136 | 1 | 20 |
| Osa06LNT0327200.3 | osa-miR156h-5p | Translation | 4.0 | 13.714 | 1 | 20 |
| Osa06LNT0327200.3 | osa-miR156i | Cleavage | 5.0 | 10.136 | 1 | 20 |
| Osa06LNT0327200.3 | osa-miR156i | Translation | 4.0 | 13.714 | 1 | 20 |
| Osa06LNT0327200.3 | osa-miR156j-5p | Cleavage | 5.0 | 10.136 | 1 | 20 |
| Osa06LNT0327200.3 | osa-miR156j-5p | Translation | 4.0 | 13.714 | 1 | 20 |
| Osa06LNT0327200.3 | osa-miR156l-5p | Translation | 4.0 | 13.714 | 1 | 21 |
| Osa06LNT0327200.3 | osa-miR535-3p | Translation | 4.5 | 21.734 | 1 | 21 |
| Osa06LNT0327200.3 | osa-miR395v | Cleavage | 5.0 | 16.507 | 1 | 21 |
| Osa06LNT0327200.3 | osa-miR1425-5p | Cleavage | 5.0 | 12.48 | 1 | 21 |
| Osa06LNT0327200.3 | osa-miR1428a-3p | Translation | 5.0 | 13.479 | 1 | 21 |
| Osa06LNT0327200.3 | osa-miR1861b | Cleavage | 3.5 | 17.726 | 1 | 22 |
| Osa06LNT0327200.3 | osa-miR1861d | Cleavage | 4.5 | 17.726 | 1 | 22 |
| Osa06LNT0327200.3 | osa-miR1861f | Cleavage | 3.5 | 17.726 | 1 | 22 |
| Osa06LNT0327200.3 | osa-miR1861h | Cleavage | 4.0 | 17.726 | 1 | 22 |
| Osa06LNT0327200.3 | osa-miR1861i | Cleavage | 3.5 | 17.726 | 1 | 22 |
| Osa06LNT0327200.3 | osa-miR1861j | Cleavage | 4.0 | 17.726 | 1 | 22 |
| Osa06LNT0327200.3 | osa-miR1861l | Cleavage | 3.5 | 17.726 | 1 | 22 |
| Osa06LNT0327200.3 | osa-miR2097-3p | Cleavage | 3.5 | 6.56 | 1 | 22 |
| Osa06LNT0327200.3 | osa-miR2098-3p | Cleavage | 4.5 | 13.133 | 1 | 20 |
| Osa06LNT0327200.3 | osa-miR2098-3p | Translation | 5.0 | 12.682 | 1 | 20 |
| Osa06LNT0327200.3 | osa-miR2099-5p | Cleavage | 5.0 | 12.238 | 1 | 22 |
| Osa06LNT0327200.3 | osa-miR2105 | Cleavage | 5.0 | 15.753 | 1 | 20 |
| Osa06LNT0327200.3 | osa-miR2919 | Cleavage | 4.0 | 20.201 | 1 | 19 |
| Osa06LNT0327200.3 | osa-miR3980a-5p | Cleavage | 5.0 | 18.842 | 1 | 21 |
| Osa06LNT0327200.3 | osa-miR3980b-5p | Cleavage | 5.0 | 18.842 | 1 | 21 |
| Osa06LNT0327200.3 | osa-miR5079a | Cleavage | 5.0 | 11.433 | 1 | 22 |
| Osa06LNT0327200.3 | osa-miR5506 | Translation | 5.0 | 13.454 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0327200.3 | 6 | Hd3b | Physiological trait | Flowering | nan | nan |
| Osa06LNT0327200.3 | 6 | qAC-6 | Physiological trait | Eating quality | R2869 | R1962 |
| Osa06LNT0327200.3 | 6 | alk6-1 | Physiological trait | Eating quality | RM190 | RM253 |
| Osa06LNT0327200.3 | 6 | hr6 | Physiological trait | Eating quality | RM190 | RM253 |
| Osa06LNT0327200.3 | 6 | ac6 | Physiological trait | Eating quality | RM190 | RM587 |
| Osa06LNT0327200.3 | 6 | qAC-6 | Physiological trait | Eating quality | RM190 | RM510 |
| Osa06LNT0327200.3 | 6 | qGC-6 | Physiological trait | Eating quality | RM190 | RM510 |
| Osa06LNT0327200.3 | 6 | nan | Resistance or Tolerance | Drought tolerance | RM170 | RM204 |
| Osa06LNT0327200.3 | 6 | nan | Morphological trait | Shoot/Seedling | OSR19 | RM225 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)