© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0327500.1
CCTCCCAAAAAGTTCTTAACATAATTTGAACAAAGAAATGAGATTCAGCTAAATGGCTGTGCCAATTAAGGAATCAGAAGGGTAAGCCGACGCTACTGCTGATTCAGCAGGCATCACCGAATTCTGTACAGTGAAAATCAATGAAAAACAAAAGGTAATGCTAGCTTCTCAACATGAAAATATGTTGCCACAGCAAAAGATGGCAAAATGGTGCTTTGTCTCCTCTTATCATTAAGAAACATCATTATGTACTCATTAGACCAAAAGGCACCTTTCAGAAGATGACTAGAAGTCCAGAACATGCTGTTTGTGTTTCACCACAACACACCCTCATGCTGTTAGACAGCTACAGCACTAAGCACAGCATCTATTTTGAATTGGAGACCTTTAATAGCTCATGAAATGCTTCTTGAGGAATATCAACGGACCCTACACGCTTCATGCGCTTCTTCCCTTCTTTTTGCTTCTCTAGCAACTTCTTTTTGCGAGTAATATCACCACCATAGCACTTGGCCAGAACGTTCTTTCTCATTGCTGACAGAGTTTCCCTTGCGATAACCTTTGAACCAACTGCGGCTTGTATAGTGATCTCAAACATTTGCCGTTCTATGAATTTCTTGAGTTTATCCACTAATTCTCGTCCAACTCTCTGAGCTTTCTGGTTGTGGACTATTGTTGCCATAGCATCAACAGGCTGACCATTAAGTAAAATATCCATCTTAACAAGATCAGACTGTTGGTACTCAGAATCTTCATAATCAAAAGTAGCATATCCAGATGTTATGCTTTTCAGTTCATTGTAGAAATCCACAATGATTTCCCTCAATGGTAATCGGTACTTCAACAAAGCCCTTTGGGCATCAATGAATGTATATTCTTGCTGCTCGCCCCTCCTCTCTGAACAAAGCATAATTACTGGCCCAACATACTAGGAATAATAATAGTTGCAATGACTGTTGGTTCCCAACAAGCTGCTATACGCTTTCCAGGATTTGAAGCCAAAGCTGCAGGGTTCTCGACTTGCACTTTGCTTCCATCACCATACTCAAAGATATATGGCACTGTCGGTATTGTCGATATGACTTGAGCTCCATGTTCTTGTTCTAGCCGCTGATGAAATACATCCATGTGTAGTAATCCTAGAAAGCCACATCTGAAGCCCATGCCAAGTGCAGTGCTTGTCTCTTTTGTAACAGACACACTCGCATCGTTACATGTTAGTTTTTCAATTGCATGGCTAAGAGCGTCAAAGTCAGAGCCATCAGCTGGGTATAGACCAGAGAAGACCATGTGTCTAGCAGGCTTGAAACCAGGAAGTGGTTCGACAATACTCTTTGCTTGATGAAGAGTATCACCAATTCGTGCTTCTTTAGTTGAACGCATTCCGCTTATGACATATCCAACTTGTCCAGTGTAAAGCACACCGGTAGGAGTAAGCTCTGGATGCATAATGCCCACATCAAGGACTTCATATGTGCGACCAGTTGCGGCAGATGCAATCTTATCTCCTTTGTGGAGAGCACCATCCACAACAGCAACATGGCATATCACCCCTTTATACTCATCATAGTATGAATCTAAGAGAAGCATGCGTACAGGTGAATCACATTTTCCAGGTGGGGAAGGAATCCGCTCAATAACAGCAGGCAAGACCTGGCTAAGGCCCTGACCAGTTTTAGCTGAAGTTAGCAGAGCTTCACTTGGATCAATGTCAAATAACCTCTTCAGTTGAGCCTTTACATTATCTGGATCAGCGGTAGGCTGATCAATCTTATTAATAACAGGAATGATGCTTAGATTCGACTCAAATGCAAGGTAGAAGTTTGCAATTGTTTGTGCTTGGACACCTTGGGCTGCATCAACTACTAAAAGAGCACCCTGACAAGCTGCAAGCGACCTGGATACTTCGTAGCTGAAATCCACATGCCCAGGAGTATCAATCAAGTTAAGCAAATAGCTTGGAGCATCTGGCTGATCAGATGCAGGAAGTTGGTTGTTAGCATGTCTGTAGAACATAGTTGCTGTTTGTGCTTTGACTGTGATTCCCCTCTCTCTCTCTACCTGTAACTTGTCGAGGTACTGAGGTTGGCCATGGCCCTTCTTGATGGTGCCGGTGAGCTCCAGCAACCGGTCGGCGAGCGTGGACTTGCCGTGGTCGACGTGCGCGATGATGGAGAAGTTCCTGACCCTCTCCGGGGGATACAGCCCAAGCTCCGAACCCAGCACCCCGCCGCGGTCCGGCGAAGCCTGGGAGGAGAGGAGGCGCTCAGGGTGCTGTAGCGCCCGGGACAAGGCGTAGGCGCCTGGCAGGACGACACGGCGCGCGGATCGCCGGAGCGCGGCGGCGCCGGCCATCCCGGAACAGCGCGGCGGCGGCGGCGGCGGGAGCTAGGGTTCTGGTT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0327500.1 | 6 | 2367091 | A | T |
| Osa06LNT0327500.1 | 6 | 2367882 | C | T |
| Osa06LNT0327500.1 | 6 | 2368688 | C | T |
| Osa06LNT0327500.1 | 6 | 2368955 | G | C |
| Osa06LNT0327500.1 | 6 | 2369583 | T | C |
| Osa06LNT0327500.1 | 6 | 2370779 | G | A |
| Osa06LNT0327500.1 | 6 | 2371466 | T | C |
| Osa06LNT0327500.1 | 6 | 2371520 | T | G |
| Osa06LNT0327500.1 | 6 | 2371998 | C | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0327500.1 | osa-miR5530 | Translation | 4.5 | 19.293 | 1 | 21 |
| Osa06LNT0327500.1 | osa-miR5516b | Cleavage | 5.0 | 18.749 | 1 | 21 |
| Osa06LNT0327500.1 | osa-miR166i-3p | Cleavage | 5.0 | 16.368 | 1 | 21 |
| Osa06LNT0327500.1 | osa-miR1425-3p | Translation | 5.0 | 16.73 | 1 | 21 |
| Osa06LNT0327500.1 | osa-miR1879 | Cleavage | 4.5 | 6.704 | 1 | 24 |
| Osa06LNT0327500.1 | osa-miR2864.2 | Cleavage | 4.5 | 15.728 | 1 | 21 |
| Osa06LNT0327500.1 | osa-miR2864.2 | Cleavage | 4.0 | 16.224 | 1 | 21 |
| Osa06LNT0327500.1 | osa-miR5516a | Cleavage | 5.0 | 18.749 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0327500.1 | 6 | Hd3b | Physiological trait | Flowering | nan | nan |
| Osa06LNT0327500.1 | 6 | qAC-6 | Physiological trait | Eating quality | R2869 | R1962 |
| Osa06LNT0327500.1 | 6 | alk6-1 | Physiological trait | Eating quality | RM190 | RM253 |
| Osa06LNT0327500.1 | 6 | hr6 | Physiological trait | Eating quality | RM190 | RM253 |
| Osa06LNT0327500.1 | 6 | qAC-6 | Physiological trait | Eating quality | RM190 | RM510 |
| Osa06LNT0327500.1 | 6 | qGC-6 | Physiological trait | Eating quality | RM190 | RM510 |
| Osa06LNT0327500.1 | 6 | nan | Resistance or Tolerance | Drought tolerance | RM170 | RM204 |
| Osa06LNT0327500.1 | 6 | nan | Morphological trait | Shoot/Seedling | OSR19 | RM225 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)