© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0328300.1
ACCGCAATATAGACATATCACATTAGATGTGAAAAAAAATTATAGCATTCCAAGAGATGCCTACCATAAACAGCAAGCAAACAGCAGTAACATAAATATAATGACGATAACCTGCTAGAGGAGATCTATTCTCGGCATTTTAATTTGGACAGGAAGAGCTGAGCATCACTTGCCATAGATATACTAATATTATTTACTAATCCATCTCACTAGCCATAGATAGATTACTGACATTATTGAGTAATAATTAATCCATCTGCACATAATAGATCAGTAGCCTTCTGCCTCACTTCACAGCCTTGCCATTGGAAGCGACTTTGTCTTCAACCTTGGGGTTGGGAGGCGGCCCATCGAAAAACTTGGATGCTCTCTCTTCTTCCATCTTTGCGTCCTCCACATCTTTCTTGCTGAGGAAACTTGGCTGGTTGGTTGAGGAGAGAAGTCTTGCCCACATCCTATCAGTAATTGAAACTTTGTTCTGCTTCTCTGTGATCCTGTAAAACGGGATATAGCAATGCCGACCATTTACTTGGCCAACAGTGAAACCAGTGTATCCAGCCATGGCTCCATGAACCACACTGTGTGCCAACAGTGTGCAATACACATTGTCAGATGCATTGCTAGGAATGGCACGTATCATGTATGTAGGATCTATATACTTGAGATTTATAGTAGTCTTGATTTTCTTGAAATGCTCTTTTATCTTTTGAGATAACCAAAGACCAACATCAAGAAGAATCGAATTGCCTGAAGCATCTTTCCCCATTGATTCCTTTGTTTCATTAATAAGTTTCTGCCCTGCACCCTCCGCAACAACGATAACCATATGACCATTCTCCTTCAGACGCTTTTCCAAATATCTAAAAAGGCCACCTTCACCTTCCAGATAGAAAGGTGACTCTGGAATCAAGCAACAATCCACGTCTCTGCTGGCTAGAGTAGCATAGTGTGCAATAAAACCACTGTGTCGACCCATTAGCTTTACGAGGCCTATACCATTCTCGGCGCTTCCAGCTTCTACATGAGCAGCATTTATTGCACGTTGGGCCTCCTCAACTGCAGTGTCGAAACCAAATGATCTGTCAATTACTGGTATATCATTATCAATCGTCTTTGGAATGCCAGCAACAGCAACCTTGAGACCACGTCTTCTAATCTCTTCAAAAATCACTCCTGCACCCCTTTGAGTACCATCACCACCAATTACATAAACCTGATTTATACCACGATCCTGGATGCTGTCAACAATCTTCATGGTGTCATGGCCTCCACGTGATGTCCCAAGAACAGTTCCACCCCTTTTGTGAATGTCGTTTACACTCTTTGGACTCAAGTCAATGGTGTTACAAGCATAGAAACCTCTATACCCACCCTGAATTCCAAGTACCCTACTGACACCATACATGTCATATAAGCCACATACAATTTCCCTAATGACAGTGTTCAGTCCAGGGCACAGTCCTCCACATGTGACAATGCATGCATGGACCTCATCCGATTCAAAAAACACCCTCTGTCGAGGCCCAGCACGACGGAAGTGGTTGCCTCTAGGGCCATCCTTGTGAACAATGGCCTTCTGGCAGACAGTGTCATCTGGGTTTACAAAGTATTGCTTCACAACCGAGTATGCCGGGTTATCTTGCAGTGGATTTGAGTATGTCGGTAGATCGGGGAGGTAGTCGCACACATGCGGCACGTCCTCGAGCACGTACCCGCCATCCCCGGTCACCAGCTTCACCTCGGGCTTCGCCGCCGCCGCCGCCCCCGCGTCACCCGCCGCCTCCCCACGCTGCCGCTGCATCGTCGTCCCCTCCACGTGCACGACCCGCGGCGTGTCACGTCGGTCGAGGAGGTGGTGCAGGTGGTCCCTCGGGCTCGGCACGTCGATCGGCCCCGGCGCGCTCCGCCTGCCGGATTCCGCGGCCTCACTGGCGGAGGCGGAGGCGGTTGGAGGCGACGCCATGGGGGCCTCGGTGTGCGGGCGCCATCTCGGATCGGGTTCGTTTCGGTTTTTCTTTCGCTGCGAGTGGGGCGGCAGCGGCGACGGATGGATGGCGACGGTGGCGCGTGACGACGACGACGAGGAGGGTGACGGTGACGGCGACGGCGGAGGGGAGGAGAGCGAACGGATGGACGAATGGTGACGACGACGCGGGGGTGGTGGTGGTGGAGGGAGGAGGAGAAGAGGAGATG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0328300.1 | 6 | 2680486 | C | T |
| Osa06LNT0328300.1 | 6 | 2680590 | G | A |
| Osa06LNT0328300.1 | 6 | 2680932 | A | T |
| Osa06LNT0328300.1 | 6 | 2682643 | T | C |
| Osa06LNT0328300.1 | 6 | 2682740 | A | T |
| Osa06LNT0328300.1 | 6 | 2683755 | C | G |
| Osa06LNT0328300.1 | 6 | 2683684 | A | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0328300.1 | osa-miR166a-5p | Translation | 4.5 | 22.473 | 1 | 21 |
| Osa06LNT0328300.1 | osa-miR166e-5p | Translation | 4.5 | 22.473 | 1 | 21 |
| Osa06LNT0328300.1 | osa-miR166l-5p | Translation | 3.0 | 22.473 | 1 | 21 |
| Osa06LNT0328300.1 | osa-miR172c | Cleavage | 4.5 | 20.477 | 1 | 21 |
| Osa06LNT0328300.1 | osa-miR414 | Translation | 3.5 | 21.655 | 1 | 21 |
| Osa06LNT0328300.1 | osa-miR416 | Cleavage | 5.0 | 12.799 | 1 | 21 |
| Osa06LNT0328300.1 | osa-miR529b | Cleavage | 4.0 | 16.629 | 1 | 21 |
| Osa06LNT0328300.1 | osa-miR444b.1 | Cleavage | 3.0 | 11.99 | 1 | 21 |
| Osa06LNT0328300.1 | osa-miR444c.1 | Cleavage | 3.0 | 11.99 | 1 | 21 |
| Osa06LNT0328300.1 | osa-miR1853-3p | Translation | 4.5 | 15.695 | 1 | 22 |
| Osa06LNT0328300.1 | osa-miR5488 | Translation | 5.0 | 14.004 | 1 | 21 |
| Osa06LNT0328300.1 | osa-miR5492 | Cleavage | 5.0 | 8.587 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0328300.1 | 6 | qAC-6 | Physiological trait | Eating quality | R2869 | R1962 |
| Osa06LNT0328300.1 | 6 | alk6-1 | Physiological trait | Eating quality | RM190 | RM253 |
| Osa06LNT0328300.1 | 6 | hr6 | Physiological trait | Eating quality | RM190 | RM253 |
| Osa06LNT0328300.1 | 6 | qAC-6 | Physiological trait | Eating quality | RM190 | RM510 |
| Osa06LNT0328300.1 | 6 | qGC-6 | Physiological trait | Eating quality | RM190 | RM510 |
| Osa06LNT0328300.1 | 6 | nan | Resistance or Tolerance | Drought tolerance | RM170 | RM204 |
| Osa06LNT0328300.1 | 6 | nan | Morphological trait | Shoot/Seedling | OSR19 | RM225 |
| Osa06LNT0328300.1 | 6 | AsTol | Resistance or Tolerance | Other soil stress tolerance | RZ516 | RG213 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)