© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa06LNT0328400.1
CTAGGATCTTTTATTCCTTTTGTCCCTAATTCATTCAGTTACATCTTGAGCTGCAAGACTAGGCTGTTCACTTGTTCTGAATGCTGAAATCGCCTGACAACGACAAGTTGACAGCATCGCGAGCTTATTTGGAGTACATTTGTTGAGTCTTGGACTGCACGCATACACACATGTTCTTGGATCTTGAACATGAAGAATTGAATATCGACAACGAAAGCGAGCCCAAGAAAGAAACATGAACGCTGCATCCCTTCTTTATAGAGAAGATCCGGGTACAAATCTCTTCCACCTTCCCAGTTTCTCTTGACCCTTGCGCGGTTTGATAGCTAGTTCATTGTCTTCCATGAGAATAGCCTTGAAACCCAATGGTTCTAGAACCTTCTGATAGTCGGTGACTGTATTATTGAATGGTGGTCCTCCTTCTTGGTCACTGATCTGTAATAAGAGATTCTCTTTACGGCGAACAAAACAGTTTTATTAAATCAAAAGAAGTGAATTGCTAGCTCCTAACTAATTTTACACCCACTTGACAGATGGTGCATGCTAGGGTAACGAGCTGAAATTAGTTCTGTTTATTGTTTTAGAGAACTGCCTCAATATGGATGAAGCAAAATATATTGGAATGATGTCAAAAGAAGTTTTAGCAGGTCCGTTTGTAATATCACCAGAGTATGCACAAATAGCTTCAGCTAATTGCTCAAAACCAATTTCCTACTTTTCAGGTGCATCCTAATATCTGTAGATGCATGATTTAGAAATGACTAAATAAGAAATCGGCCGCCAGAAGTTGGCTGCTTGTTGAAAGCTCTCGAGTTAGGAAAACTAGAGGCAATACCTCATTGATTTACACCAAGCTATGAAAACCAATTTAATCAATTTCCCCATTGCCCATTTATGTATATGCTATCATAAATAGCAGCCAAAGAGTAGAAAATAACTCACTATGTTGATCCTCAAAACTTTTGTCAATCTAACAGAACATGATAAACATTGCTAGCTCCTTGCATAACAGTCCATAAGACAACTTGTATAGTTAACCCTACCTAAATTCTATTTTCTGTCTTCAGAAATAGCGAGTGCATACGAGGCTATGTCTTCAGAAGGATAGGCTATGAATACAAGCCTCAGACCTCAGCACAATATGATATGATTAGTACCATGACATCCTCAATGGAAAAGTAAACAAAAGAATAGATAGATTCTTCAGTTACCAAATATATAAGGGTGATTAGCTCTCCATGAGGTTTTAGAAGCCCACTAACTGTTTCTGCCCAAGCCAACCTCAAGCTTGGATCAAGTGCACAAAAGAACCTGCTTAGCCTTCTCCACAGCTGTACTAGAAATATCCAAGCCAACAACAAATCGCTCAGGGCTTGCCAGAGCAACCACATCATATCCCGTGCCGCATCCTGGAACCAGAGCTCTCCCCTTCGGGAGAGTTCCTGATTTAACGAGATGTTCGATGATAGGTGTTGGCTTCCCCAAATCCCACGGGGTTACGGCGGCCTCCCACGACTTCTCCCAGCCATCTGCCGCGTCCCCGCGCTGCACGAGCTCCCGCAGCCTCCCCACCGCCGGGTTATTGCTCGGGTCCCTTCCGCCGCCGCCGCCCACCCTCGCCGCCGACGAGCTCATCGACGCGAAGAACCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa06LNT0328400.1 | 6 | 2775090 | T | C |
| Osa06LNT0328400.1 | 6 | 2779004 | T | G |
| Osa06LNT0328400.1 | 6 | 2775460 | T | A |
| Osa06LNT0328400.1 | 6 | 2775477 | G | T |
| Osa06LNT0328400.1 | 6 | 2775755 | A | G |
| Osa06LNT0328400.1 | 6 | 2775818 | T | A |
| Osa06LNT0328400.1 | 6 | 2776052 | A | G |
| Osa06LNT0328400.1 | 6 | 2776320 | A | T |
| Osa06LNT0328400.1 | 6 | 2778510 | C | T |
| Osa06LNT0328400.1 | 6 | 2779327 | A | C |
| Osa06LNT0328400.1 | 6 | 2779401 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa06LNT0328400.1 | osa-miR5541 | Cleavage | 4.5 | 20.851 | 1 | 21 |
| Osa06LNT0328400.1 | osa-miR6253 | Cleavage | 5.0 | 14.491 | 1 | 22 |
| Osa06LNT0328400.1 | osa-miR160f-3p | Translation | 4.5 | 10.38 | 1 | 21 |
| Osa06LNT0328400.1 | osa-miR168a-5p | Translation | 5.0 | 12.125 | 1 | 21 |
| Osa06LNT0328400.1 | osa-miR171h | Cleavage | 5.0 | 16.591 | 1 | 21 |
| Osa06LNT0328400.1 | osa-miR1876 | Translation | 4.5 | 11.723 | 1 | 24 |
| Osa06LNT0328400.1 | osa-miR1880 | Cleavage | 5.0 | 13.608 | 1 | 24 |
| Osa06LNT0328400.1 | osa-miR2104 | Cleavage | 5.0 | 19.57 | 1 | 22 |
| Osa06LNT0328400.1 | osa-miR2104 | Translation | 5.0 | 16.502 | 1 | 22 |
| Osa06LNT0328400.1 | osa-miR2905 | Cleavage | 3.5 | 16.682 | 1 | 21 |
| Osa06LNT0328400.1 | osa-miR3981-3p | Cleavage | 4.5 | 14.211 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa06LNT0328400.1 | 6 | Lhd1(t) | Physiological trait | Flowering | nan | nan |
| Osa06LNT0328400.1 | 6 | En-Se1 | Physiological trait | Flowering | nan | nan |
| Osa06LNT0328400.1 | 6 | alk6-1 | Physiological trait | Eating quality | RM190 | RM253 |
| Osa06LNT0328400.1 | 6 | hr6 | Physiological trait | Eating quality | RM190 | RM253 |
| Osa06LNT0328400.1 | 6 | qAC-6 | Physiological trait | Eating quality | RM190 | RM510 |
| Osa06LNT0328400.1 | 6 | qGC-6 | Physiological trait | Eating quality | RM190 | RM510 |
| Osa06LNT0328400.1 | 6 | nan | Resistance or Tolerance | Drought tolerance | RM170 | RM204 |
| Osa06LNT0328400.1 | 6 | nan | Morphological trait | Shoot/Seedling | OSR19 | RM225 |
| Osa06LNT0328400.1 | 6 | AsTol | Resistance or Tolerance | Other soil stress tolerance | RZ516 | RG213 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)